KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:39 2014 Check: 00 .. Name: ENSTTRP00000008826/1-624 Len: 1691 Check: 7141 Weight: 1.00 Name: ENSBTAP00000052366/1-626 Len: 1691 Check: 6540 Weight: 1.00 Name: BACU000592/1-1607 Len: 1691 Check: 442 Weight: 1.00 Name: bmy_12276T0/1-771 Len: 1691 Check: 495 Weight: 1.00 // 1 50 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 MALNTQIRAT CLLLLLLVSL TSGLVLPPET RQLADLQTQD TAGDAAGLTP bmy_12276T0/1-771 -GLDPGRPGD C--------- ---------- ---------- ----ERGLRS 51 100 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 VLQRLRRDTH IPTCKGGICR VSISMCLSGS VHSRSECLCE HGTQAGPCVC bmy_12276T0/1-771 ---RECRSKS I-RCKGGICR VSISMCLSGS VHSRSECLCE RGTQ------ 101 150 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- -----MIFLT ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- -----MIFLT BACU000592/1-1607 PIAMPMPVQV CGGQEDAGWP ADSSKWDQKT FPTQGDGAVA HLLYKMIFLT bmy_12276T0/1-771 ---------- ------AGWP ADSFKWDQKT FPTQGDGAVA HLLYKMIFLT 151 200 ENSTTRP00000008826/1-624 ALPLFWIMIS ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ALSLFWIMIS ---------- ---------- ---------- ---------- BACU000592/1-1607 ALPLFWIMIS ---------- ---------- ---------- ---------- bmy_12276T0/1-771 ALPLFWIMIS GNAWGSGAPG VLAPEQAGVY SVGLWTPPPP RRAVEGDGSE 201 250 ENSTTRP00000008826/1-624 ---------- ---------- ASRGGHWGAW MPSSISAFEG TCVSIPCRFD ENSBTAP00000052366/1-626 ---------- ---------- ASRGGQWGAW MPSSISAFEG TCVSIPCRFS BACU000592/1-1607 ---------- ---------- ASRGGHWGAW MPSSISAFEG TCVSIPCRFD bmy_12276T0/1-771 GVGGIRAGHV PQPQRSCLPT ASRGGHWGAW MPSSISAFEG TCVSIPCRFD 251 300 ENSTTRP00000008826/1-624 FPDELRPAVV HGVWYF-SPY PKNYPPVVFK SRXXXXXXXX XXXXXXXXXX ENSBTAP00000052366/1-626 FPDELRPAVV HGVWYFNSPY PKNYPPVVFK SRTQVVHESF QGRSRLLGDL BACU000592/1-1607 FPDELRPAVV HGVWYFNSPY PKNYPPVVFK SRTQVVHESF QGRSRLLGDL bmy_12276T0/1-771 FPDELRPAVV HGVWYFNSPY PKNYPPVVFK SRTQVVHESF QGRSRLLGDL 301 350 ENSTTRP00000008826/1-624 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXTPNIMV ENSBTAP00000052366/1-626 GLRNCTLLLS NLSPELGGKY YFRGDLGGYN QYTFSEHSVL DIINTPNIVV BACU000592/1-1607 GLRNCTLLLS NLSPELGGKY YFRGDLGGYN QYTFSEHSVL DIINTPNIMV bmy_12276T0/1-771 GLRNCTLLLS NLSPELGGKY YFRGDLGGYN QYTFSEHSVL DIINTPNIMV 351 400 ENSTTRP00000008826/1-624 PPEVVAGTEV EVSCMVPDNC PEMHPELSWL GHEGLGEPAV LGRLREDEGT ENSBTAP00000052366/1-626 PPEVMAGTEV EVSCMVPDNC PELHPELSWL GHEGLGEPTV LGRLREEEGT BACU000592/1-1607 PPEVVAGTEV EVSCTVPDNC PELHPELSWL GHEGLGEPAV LGRLREDEGT bmy_12276T0/1-771 PPEVVAGTEV EVSCMVPDNC PELHPELSWL GHEGLGEPAV LGRLREDEGT 401 450 ENSTTRP00000008826/1-624 WVQVSLLHFV PTREANGYRL GCQASFPNTT LQFEGYASLD VKYPPVIVEM ENSBTAP00000052366/1-626 WVQVSLLHFV PTRETNGHRL GCQASFPNTT LQFEGYASLD IKYPPVIVEI BACU000592/1-1607 WVQVWLLHFV PTREANGYRL GCQASFPNTT LQFEGYASLD VKCEP----- bmy_12276T0/1-771 WVQVSLLHFV PTREANGYRL GCQASFPNTT LQFEGYASLD VKYPPVIVEM 451 500 ENSTTRP00000008826/1-624 NSSVEAIEGS HVSMLCGADS NPPPLLTWMR DGTVLREAVT ESLSLELDEV ENSBTAP00000052366/1-626 NSTVEAIEGS HVSLFCGADS NPPPLLTWMR DGTVLREAVA ESLSLEVDEV BACU000592/1-1607 ---------- ---------G NPPPLLTWMR DGTVLREAVT ESLSLELDEV bmy_12276T0/1-771 NSSVEAIEGS HVSLLCGADS NPPPLLTWMR DGTVLREAVT ESLSLELDEV 501 550 ENSTTRP00000008826/1-624 TPAEDGVYAC LAENAYGQDN RTVGLSVMYA PWKPTVNGTV VAVEGETVSI ENSBTAP00000052366/1-626 TPAEDGVYLC LAENTYGQDN RTVELSVMYA PWKPMVNGTV VAVEGETVSI BACU000592/1-1607 TPAEDGVYAC LAENAYGQDN RTVGLSVMYA PWKPTVNGTV VAVEGETVSI bmy_12276T0/1-771 TPAEDGIYAC LAENAYGQDN RTVGLSVMYA PWKPTVNGTV VAVEGETVSI 551 600 ENSTTRP00000008826/1-624 LCSTQSNPDP ILTIFKEKQI LATVIYESEL QLELPAVVPE DDGEYWCVAE ENSBTAP00000052366/1-626 LCSTQSNPDP ILTIFKEKQI LATVIYESEL QLELPAVTPE DDGEYWCVAE BACU000592/1-1607 LCSTQSNPDP ILTIFKEKQI LATVIYESEL QLELPAVMPE DDGEYWCVAE bmy_12276T0/1-771 LCSTQSNPDP ILTIFKEKQI LATVIYESEL QLELPAVMPE DDGEYWCVAE 601 650 ENSTTRP00000008826/1-624 NQYGQRATAF NLSVEFAPVI LLESHCAAAR DTVQCLCVVK ANPEPSVAFE ENSBTAP00000052366/1-626 NQYGQRATAF NLSVEFAPVI LLESHCAAAR DTVQCLCVVK ANPEPSVAFE BACU000592/1-1607 NQYGQRATAF NLSVEFAPVI LLESHCAAAR DTVQCLCVVK ANPEPSVAFE bmy_12276T0/1-771 NQYGQRATAF NLSVEFAPVI LLESHCAAAR DTVQCLCVVK ANPEPSVAFE 651 700 ENSTTRP00000008826/1-624 LPSRNVTVNE TEREFVYSER SGLLLTSILT LRGQAQAPPR VICSSHNLYG ENSBTAP00000052366/1-626 LPLRNVTVNE TEREFVYSER SGLLLTSILT LRGQAQAPPR VICTSHNLYG BACU000592/1-1607 LPSRNVTVNE TEREFVYSER SGLLLTSILT LRGQAQAPPR VICSSHNLYG bmy_12276T0/1-771 LPSRNVTVNE TEREFVYSER SGLLLTSILT LRGQAQAPPR VICSSHNLYG 701 750 ENSTTRP00000008826/1-624 TKSLELPFQG AHRLMWAKIG PVGAVVAFAI LIAVVCYITQ TRRKKNVTES ENSBTAP00000052366/1-626 TKSLELPFQG AHRLMWAKIG PVGAVVAFAI LIAIVCYITQ TRRKKNVTES BACU000592/1-1607 TKSLELPFQG THRLMWAKIG PVGAVVAFAI LIAIVCYITQ TRRKKNVTES bmy_12276T0/1-771 TKSLELPFQG THRLMWAKIG PVGAVVAFAI LIAIVCYITQ TRRKKNVTES 751 800 ENSTTRP00000008826/1-624 PSFPAGDDPP VLFSSDFRIS GAPEKYEXXX XXXXXXXXXX XXXXPQKLDL ENSBTAP00000052366/1-626 PSFSGGDNPP VVFSSDFRIS GAPEKYESER RLGSERRLLG LRGEPPELDL BACU000592/1-1607 PSFSAGDDPP VLFSSDFRIS GVPEKYESER RLGSERRLLG LRGEPPELDL bmy_12276T0/1-771 PSFSAGDDPP VLFSSDFRIS GVPEKYESER RLGSERRLLG LRGEPPELDL 801 850 ENSTTRP00000008826/1-624 NYFHADL-KR ASKDSYTLTE ELAEYAEIRV K--------- ---------- ENSBTAP00000052366/1-626 SYSHSDLGKR PTKDSYTLTE ELAEYAEIRV K--------- ---------- BACU000592/1-1607 SYSHSDLGKR PTKDSYTLTE ELAEYAEIRV KPDPSAEPRP AALKLLPLRA bmy_12276T0/1-771 SYSHSDLGKR PTKDSYTLTE ELAEYAEIRV K--------- ---------- 851 900 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 GSSGLALVHK YLAFSDSASW TFEHPKTLYA WDGACVWIPC RYSIVNRHSI bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 DNLTVYHNYK YDNSTKSYRG TILYKNLKIR DFPPRQGRVR FLGNSRYNCT bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 LLINPVKVND SGQLGLRMTS KEDKWMEPIG LNISETAPPP RIELPPEIRE bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 LRDVTVTCLL NFACFEYQVH LQWSLEEPAV TSTCLSTKTV STQSTLTFQP bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 QWTHHGKNLT CQLWDPTEQQ LLSEETVWLD VKHAPKLKIQ VSPTEATVTE bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 GESVTMTCQI VSSNPRHRGV SWLRDGAPLL AEETPTLTLP QVTRKMSGQY bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 QCKAHNDVGS EKSEAVDLQV HYAPEPSSVQ IFSSPAKEGN KVELTCISLA bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 NPPPTNYTWY YNGLEMPGKT DRTFQIPEVL LRHAGEYSCL AENSLGPGDV bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 GQGADLEVQY PPKEVITVIQ NRTPIREGDS VILSCTYNSS NPRVTRYEWN bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 HLGFQDQLLP AGLTIRKVAW DTGPVKCAAC NQWCLWSPPV NLDVQYAPKD bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 VSVQVTPHNE IRSGNPVLLQ CDFLSSRPTD VRFFWKKNGI LLEEGKKLSF bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1401 1450 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 DAISPEDAGI YHCLVNNSIG QTSSKPWDLQ VLYAPRSLRV SISPKGRLVE bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1451 1500 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 GKKAVLTCES DANPPTSHYT WFDWNNQDLR HYDQTLRLDP VTLRHSGAYW bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1501 1550 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 CQGTNRLGRG QSPPTTLTVY YSSATISRRV ALGVGLCLAI FLLATWGVKL bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1551 1600 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 QRSWKRIQRQ QGLQESSSGQ SFFVRNVKAR RIPQAEGPHS LGCYNPVMED bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1601 1650 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- ---------- BACU000592/1-1607 AVSYAALRFP LGETDAPRPG DAGTSETRGL SPNRDDTVTY SVVQKRQVGD bmy_12276T0/1-771 ---------- ---------- ---------- ---------- ---------- 1651 1700 ENSTTRP00000008826/1-624 ---------- ---------- ---------- ---------- - ENSBTAP00000052366/1-626 ---------- ---------- ---------- ---------- - BACU000592/1-1607 YENVTPEVLE DEGIHYSELV RFGFGEPPLA QEGVEYVTLK H bmy_12276T0/1-771 ---------- ---------- ---------- ---------- -