KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:01:39 2014  Check: 00 ..

 Name: ENSP00000260953/1-209     Len:    219  Check:  9665  Weight:  1.00
 Name: ENSBTAP00000052382/1-208  Len:    219  Check:  9300  Weight:  1.00
 Name: ENSTTRP00000002021/1-205  Len:    219  Check:  3035  Weight:  1.00
 Name: bmy_21194T0/1-189         Len:    219  Check:  7383  Weight:  1.00
 Name: BACU010112/1-219          Len:    219  Check:  7451  Weight:  1.00

//


                          1                                                   50
ENSP00000260953/1-209     MKKVRLKELE SRLQQVDGFE KPKLLLEQYP TRPHIAACML YTIHNTYDDI 
ENSBTAP00000052382/1-208  MKKLKLKELE SRLQQVDGFE KPKVLLEQYP TRPHIAACML YTIHNTYGDI 
ENSTTRP00000002021/1-205  ----KLKELE SRLQQVDGFE KPKLLLEQYP TRPHIAACML YTIHNTYDDI 
bmy_21194T0/1-189         MKKLRLKELE SHLQQVDGFE KPKLLLEQYP TRPHIAACML YTIHNTYDDI 
BACU010112/1-219          MKKLRLKELE SHLQQVDGFE KPKLLLEQYP TRPHIAACML YTIHNTYDDI 


                          51                                                 100
ENSP00000260953/1-209     ENKVVADLGC GCGVLSIGTA MLGAGLCVGF DIDEDALEIF NRNAEEFELT 
ENSBTAP00000052382/1-208  ENKVVADLGC GCGVLSIGTA MLGAGLCVGF DIDEDALEIF NRNVEEFELT 
ENSTTRP00000002021/1-205  ENKVVADLGC GCGVLSIGTA MLGAGLCVGF DIDEDALEIF NRNVEEFELT 
bmy_21194T0/1-189         ENKVVADLGC GCGVLSIGTA MLGAGLCVGF DIDEDALEIF NRNVEEFELT 
BACU010112/1-219          ENKVVADLGC GCGVLSIGTA MLGAGLCVGF DIDEDALEIF NRNVEEFELT 


                          101                                                150
ENSP00000260953/1-209     NIDMVQCDVC LLSNRMSKSF DTVIMNPPFG TKNNKGTDMA FLKTALEMAR 
ENSBTAP00000052382/1-208  NVDVVQCDVC SLSNRMSKSF DTVIMNPPFG T-NNKGTDMA FLKTALEMAR 
ENSTTRP00000002021/1-205  NVDMVQCDVC SLSNRMSKSF DTVIMNPPFG TKNNKGTDMA FLKTALEMAR 
bmy_21194T0/1-189         NVDMVQCDVC SLSNRMSKSF DTVIMNPPFG TKNNKGTDMA FLKTALEMAR 
BACU010112/1-219          NVDVVQCDVC SLSNRMSKSF DTVIMNPPFG TKNNKGTDMA FLKTALEMAR 


                          151                                                200
ENSP00000260953/1-209     TAVYSLHKSS TREHVQKKAA EWKIKIDIIA ELRYDLPASY KFHKKKSVDI 
ENSBTAP00000052382/1-208  TAVYSLHKSS TREHIQKKAA EWKVKIDIIA ELRYDLPASY KFHKKKSVDI 
ENSTTRP00000002021/1-205  TAVYSLHKSS TREHIQKKAA EWKIKIDIIA ELRYDLPASY KFHKRKSVDI 
bmy_21194T0/1-189         TAVYSLHKSS TREHIQKKAA EWKIKIDIIA ---------- ---VKGSKCL 
BACU010112/1-219          TAVYSLHKSS TREHIQKKAA EWKIKIDIIA ELRYDLPASY KFHKRKSVSL 


                          201                                                250
ENSP00000260953/1-209     EVDLIRFS-- --------F 
ENSBTAP00000052382/1-208  EVDLIRFS-- --------F 
ENSTTRP00000002021/1-205  EVDLIRFS-- --------F 
bmy_21194T0/1-189         EV-------- --------- 
BACU010112/1-219          LILVYLHSVL KNFTVSNYF