KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:39 2014 Check: 00 .. Name: ENSP00000289788/1-389 Len: 437 Check: 3486 Weight: 1.00 Name: ENSBTAP00000052434/1-431 Len: 437 Check: 9057 Weight: 1.00 Name: bmy_11234T0/1-247 Len: 437 Check: 7063 Weight: 1.00 Name: BACU007842/1-260 Len: 437 Check: 8200 Weight: 1.00 Name: ENSTTRP00000014822/1-388 Len: 437 Check: 9552 Weight: 1.00 // 1 50 ENSP00000289788/1-389 -------MAI TLTLQTAEMQ EGLLAVKVKE EEEEHS-CGP ESGLSRNNPH ENSBTAP00000052434/1-431 MSQAHSRIAT ALALQTPEMH EGLLAVKVKE EKGDHTRMGQ EPGLSGDNPH bmy_11234T0/1-247 -------MTT ALALQTPEMQ EGLIAVKVKE EEGDHA-YGQ ESGLSRDNPH BACU007842/1-260 --------MT VLALK----- ---------- ---------- ---------- ENSTTRP00000014822/1-388 -------MTT ALALQTPEMQ EGLIAVKVKE EEGDHA-YGQ ESGLSRDNSH 51 100 ENSP00000289788/1-389 TREIFRRRFR QFCYQESPGP REALQRLQEL CHQWLRPEMH TKEQILELLV ENSBTAP00000052434/1-431 TREIFRRRFR QFCYQETPGP REALRRLQEL CHQWLRPEMH TKEQILELLV bmy_11234T0/1-247 TREIFRRRFR QFCYQETPGP REALRRLREL CHQWLRPEMH TKEQILELLV BACU007842/1-260 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014822/1-388 TREIFRRRFR QFCYQETPEP REALRRLREL CHQWLRPEMH TKEQI-ELLV 101 150 ENSP00000289788/1-389 LEQFLTILPE ELQAWVRQHR PVSGEEAVTV LEDLERELDD PGEQVLSHAH ENSBTAP00000052434/1-431 LEQFLTILPE ELQAWVREHR PVSGEEAVIV LEDLERELDE PREQVPARDH bmy_11234T0/1-247 LEQFLTILPE ELQAWVREHR PVSGEEAVTV LEDLERELDE PGEQVPAHDH BACU007842/1-260 ---------- ---------- ---------- ---------- ----VPAHDH ENSTTRP00000014822/1-388 LEQFLTILXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXVPVHDR 151 200 ENSP00000289788/1-389 EQEEFVKEKA TPGAAQESSN DQFQTLEEQL GYNLREVCPV QEI------- ENSBTAP00000052434/1-431 EQKELVKEKA ALGTAQESSS SQLQTLEERP QWNLRGVGPI QEIGSLSHSP bmy_11234T0/1-247 EQEELVKEKA TLGAAQESSG GQLQTLEEQP QWNLRGVCPV QEI------- BACU007842/1-260 EQEELVKEKA TLGAAQESSG GQLQTLEEQP QWNLRGVCPV QEI------- ENSTTRP00000014822/1-388 EQEELVKEKA TLGAAQESSG GQLQTLEEQP QWNLRGMCPV QEI------- 201 250 ENSP00000289788/1-389 ---------- ---------- ---------- ---DGKAGTW NVELAPKREI ENSBTAP00000052434/1-431 NENMVACPLP PTLLTSIFLS LGTQHSCNPF IISDNETGTW NVELAPKREL bmy_11234T0/1-247 ---------- ---------- ---------- ---DDEAGTW NVELAPKRDL BACU007842/1-260 ---------- ---------- ---------- ---DDEAGTW NVELAPKRDL ENSTTRP00000014822/1-388 ---------- ---------- ---------- ---DDEAGTW NVELAPERDL 251 300 ENSP00000289788/1-389 SQEVKSLIQV LGKQNGNITQ IPEYGDTCDR EGRLEKQRVS SSVERPYICS ENSBTAP00000052434/1-431 SKEKKSLVEA PEKLNGDTIP VPEYGETCDQ EGRLERQRGS SSVERPYVCS bmy_11234T0/1-247 SKETKSRVEV PETLNGDIIP VPECGETCDH EGRWERQRV- ---------- BACU007842/1-260 SKETKSRVEV PETLNGDIIP VPECGETCDH EARWERQRVS SSVERPYICG ENSTTRP00000014822/1-388 SKETKSHVEV PEKLNGSIIP VPECGETCDH EGRWERQRVS SSVERPYICG 301 350 ENSP00000289788/1-389 ECGKSFTQNS ILIEHQRTHT GEKPYECDEC GRAFSQRSGL FQHQRLHTGE ENSBTAP00000052434/1-431 DCGKSFTQNS ILTEHQRTHT GEKPYECDEC GRAFSQRSGL FQHQRLHTGE bmy_11234T0/1-247 ---------- ---------- -----DVDYC ---------- ---------- BACU007842/1-260 ECGKSFTQNS ILIEHQRTHT GEKPYECDEC GRAFSQRSGL FQHQRLHTGE ENSTTRP00000014822/1-388 ECGKSFTQNS ILIEHQRTHT GEKPYECDEC GRAFSQRSGL FQHQRLHTGE 351 400 ENSP00000289788/1-389 KRYQCSVCGK AFSQNAGLFH HLRIHTGEKP YQCNQCNKSF SRRSVLIKHQ ENSBTAP00000052434/1-431 KRYQCSVCGK AFSQNAGLFH HLRIHTGEKP YQCNQCSKSF SRRSVLIKHQ bmy_11234T0/1-247 ---------- ---------- ---------- ---------- ---------- BACU007842/1-260 KRYQCSVCGK AFSQNAGLFH HLRIHTGEKP YQCSQCSKSF SRRSVLIKHQ ENSTTRP00000014822/1-388 KRYQCSVCGK AFSQNAGLFH HLRIHTGEKP YQCSQCSKSF SRRSVLIKHQ 401 450 ENSP00000289788/1-389 RIHTGERPYE CEECGKNFIY HCNLIQHRKV HPVAESS ENSBTAP00000052434/1-431 RIHTGERPYK CDKCGKNFIY HCNLIQHRKV H------ bmy_11234T0/1-247 ---------- -------F-- ---------- ------- BACU007842/1-260 RIHTGERPYE CEECGKNFSY HCNLVQHRKV HPVAESS ENSTTRP00000014822/1-388 RIHTGERPYE CEECGKNFSY HCNLVQHRKV HPVAESS