KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:41 2014 Check: 00 .. Name: bmy_02469T0/1-448 Len: 644 Check: 1669 Weight: 1.00 Name: ENSP00000260952/1-643 Len: 644 Check: 5420 Weight: 1.00 Name: ENSBTAP00000052455/1-640 Len: 644 Check: 2823 Weight: 1.00 Name: BACU018985/1-643 Len: 644 Check: 2703 Weight: 1.00 Name: ENSTTRP00000004881/1-638 Len: 644 Check: 4284 Weight: 1.00 // 1 50 bmy_02469T0/1-448 --------SF SVEHFSKDLK EDLLCNLKRW GPNSSKQLLK SNVNYQCLFS ENSP00000260952/1-643 MCGICCSVNF SAEHFSQDLK EDLLYNLKQR GPNSSKQLLK SDVNYQCLFS ENSBTAP00000052455/1-640 MCGICCAVSF SVEHFSRDLK EDLLCNLKRR GPDSSKQLLR STVNYQCLFS BACU018985/1-643 MCGICCAVSF SVEHFNKDLK EDLLCNLKRR GPNSSKQLLK SNINYQCLFS ENSTTRP00000004881/1-638 MCGICCAV-- -LSEHSQRLK E-LLCNLKRR G-NSSKQLLK SNINYQCLFS 51 100 bmy_02469T0/1-448 GHVLHLRGVL TAQPVKDERG NVFLWNGEVF SGIKVEAEEN DTQIMFNYLS ENSP00000260952/1-643 AHVLHLRGVL TTQPVEDERG NVFLWNGEIF SGIKVEAEEN DTQILFNYLS ENSBTAP00000052455/1-640 GHVLHLRGLL TAQPVEDERG NVFLWNGEVF SGIKVEAEEN DTQIMFHYLS BACU018985/1-643 GHVLHLRGVL TAQPVEDERG NVFLWNGEVF SGIKVEAEEN DTQIMFNYLS ENSTTRP00000004881/1-638 GHVLHLRGVL TAQPVEDERG NVFLWNGEVF SGIKVEAEEN DTQIMFNYLS 101 150 bmy_02469T0/1-448 SCKNESDILS LFSKGQGPWS FIYYQASSHS LWLAS--FG- ILVIW----- ENSP00000260952/1-643 SCKNESEILS LFSEVQGPWS FIYYQASSHY LWFGRDFFGR RSLLWHFSNL ENSBTAP00000052455/1-640 SCKNESDILS LFSEVQGPWS FIYYQASSHS LWFGRDFFGR RSLLWHFSNL BACU018985/1-643 SCKNESDILS LFSKVQGPWS FIYYQASSHS LWFGRDFFGR RSLLWHFSSL ENSTTRP00000004881/1-638 SCKNESDILS LFSKVQGPWS FIYYQASSHS LWFGRDFFGR RSLLWHFSSL 151 200 bmy_02469T0/1-448 ----ARVPVS LQLAPKHLEW ---PISGK-- -KFQCLEFSE -LISRILP-- ENSP00000260952/1-643 GKSFCLSSVG TQTSGLANQW QEVPASGLFR IDLKSTVISG CIILQLYPWK ENSBTAP00000052455/1-640 GKSFCLSSVG TQASGVADQW QEVPASGIFR IDLKSASISQ SVVLKLYPWK BACU018985/1-643 GKSFCLSSVG TQTSGVPNQW QEVPASGIFR IDLKSTSISK SVVLKLYPWK ENSTTRP00000004881/1-638 GKSFCLSSIG AQTSGVANQW QEVPASGIFR IDLKSTSISK SVVLKLYPWK 201 250 bmy_02469T0/1-448 FPNLEDVIKE CV-NSLTQIS ADLSTFISVV ANEAKLYLKE PVVPLNMTLP ENSP00000260952/1-643 YISRENIIEE NV-NSLSQIS ADLPAFVSVV ANEAKLYLEK PVVPLNMMLP ENSBTAP00000052455/1-640 YSSGGDDIRE CVHNSLTEIS ADLPTLVLVA ANEAKLYLKD PVVPLNMALP BACU018985/1-643 YNSREDVIKE CV-NSLTQIS ADLPTFVSVA ANEAKLYLKE PVVPLNMILP ENSTTRP00000004881/1-638 YNSREDVIKE CV-NSLTQIS ADLPTFVSVA ANEAKLYLKE PVVPLNMILP 251 300 bmy_02469T0/1-448 QAAFEIHCSS ISSVPLTRET LQVFLIDGHV KEVVQQFINV LSVGVNRRVL ENSP00000260952/1-643 QAALETHCSN ISNVPPTREI LQVFLTDVHM KEVIQQFIDV LSVAVKKRVL ENSBTAP00000052455/1-640 QAAFETHCSS ISRSPLTRET LRVFLTDGHT KEVVQQFIGV LSTAVKRRVL BACU018985/1-643 QAAFEIHCSS ISSVPPSRET LQVFLTDGHM KEVVQQFIDV LSIAVKRRVL ENSTTRP00000004881/1-638 QAAFEIHCTS ISSVPPSRET LQVFLTDGHM KEVVQQFIDV LSIAVKRRVL 301 350 bmy_02469T0/1-448 CLPRDENLTS NKVLKTSNRK ANVAILFSRG IESMVIAALA DHHIPLDEPI ENSP00000260952/1-643 CLPRDENLTA NEVLKTCDRK ANVAILFSGG IDSMVIATLA DRHIPLDEPI ENSBTAP00000052455/1-640 CLPRDENLAP SKVLKTSNGK ANVAVLFSGG IDSMVIAALA DHHIPLDEPI BACU018985/1-643 CLPRDENLTQ SEVLKTSNRK ANVAILFSGG IDSMVIAVLA DRHIPLDEPV ENSTTRP00000004881/1-638 CLPRDENLTQ SEVLNTSNRK ANVAILFSGG IDSMVIAALA DRHIPLDEPI 351 400 bmy_02469T0/1-448 DLFNVAFMTK EKTIPAFLE- ---KTENHCE IPSEESSKNV VAAA--TPGE ENSP00000260952/1-643 DLLNVAFIAE EKTMPTTFNR EGNKQKNKCE IPSEEFSKDV AAAAADSPNK ENSBTAP00000052455/1-640 DLLNVAFMTK EKTIPVNFNK KGRKQANHCE MPSEEFSKRA AATAAASPGE BACU018985/1-643 DLLNVAFMTK EKTIPAGFNK KGRKEKNNCE KPSEESSKNV TAAAAANAGE ENSTTRP00000004881/1-638 DLLNVAFMTK EKTIPAGFNK KGRKEKNNCE KRSEESSTNV TAAAAANPGE 401 450 bmy_02469T0/1-448 QFNIPDRITG RTGLKELQAA NPFRMWNFVE INVSLEELQR LRRTRISHFI ENSP00000260952/1-643 HVSVPDRITG RAGLKELQAV SPSRIWNFVE INVSMEELQK LRRTRICHLI ENSBTAP00000052455/1-640 QLSVPDRVTG RAGLKELQAA NPSRIWNFVE INVSLEELQR LRRTRISHLI BACU018985/1-643 QFNVPDRITG RAGLKELQAA NPSRIWNFVE INVSLEELQR LRRTRISHLI ENSTTRP00000004881/1-638 QFNVPDRITG RAGLKELQAA SPSRIWNFVE INVSLEELQR LRRTRISHLI 451 500 bmy_02469T0/1-448 QPLDTVLDDS IGCAVWFASG GVGWLVTQDE AKPY------ ---------- ENSP00000260952/1-643 RPLDTVLDDS IGCAVWFASR GIGWLVAQEG VKSYQSNAKV VLTGIGADEQ ENSBTAP00000052455/1-640 QPLDTVLDDS IGCAVWFASR GAGWLVTQDG AQPYQSSAKV VLTGIGADEQ BACU018985/1-643 QPLDTVLDDS IGCAVWFASG GVGWLVTQDE AKPYQSSAKV VLTGIGADEQ ENSTTRP00000004881/1-638 QXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV VLTGIGADEQ 501 550 bmy_02469T0/1-448 ---------- ---------- ---------- ---------- ---------- ENSP00000260952/1-643 LAGYSRHRVR FQSHGLEGLN KEIMMELGRI SSRNLGRDDR VIGDHGKEAR ENSBTAP00000052455/1-640 LAGYSRHRVR FLAHGLEGLN KEIEMELGRI SSRNLGRDDR VISDHGKEAR BACU018985/1-643 LAGYSRHRVR FQTHGLEGLN KEIEMELGRI SSRNLGRDDR VIGDHGKEAR ENSTTRP00000004881/1-638 LAGYSRHRVR FQTHGLEGLN KEIEMELGRI SSRNLGRDDR VIGDHGKEAR 551 600 bmy_02469T0/1-448 ---------- ---------- ---------- ---------- ---------- ENSP00000260952/1-643 FPFLDENVVS FLNSLPIWEK ANLTLPRGIG EKLLLRLAAV ELGLTASALL ENSBTAP00000052455/1-640 FPFLDENVVS FLNSLPVWEK ANLTLPRGIG EKLILRLAAV ELGLTASALL BACU018985/1-643 FPFLDENVVS FLNSLPVWEK TNLTLSRGIG EKLILRLAAV ELGLTTSALL ENSTTRP00000004881/1-638 FPFLDENVVS FLNSLPVWEK ANLTLSRGIG EKLILRLAAV ELGLTTSALL 601 650 bmy_02469T0/1-448 ---------- ---------- ---------- ---------- ---- ENSP00000260952/1-643 PKRAMQFGSR IAKMEKINEK ASDKCGRLQI MSLENLSIEK ETKL ENSBTAP00000052455/1-640 PKRALQFGSR IAKMEKNNEK ASDKCGRLQI ISLENLSVEN ---- BACU018985/1-643 PKRAMQFGSR IAKMEKNNEK ASDKCGRLQV ISLENLSIEK EIKT ENSTTRP00000004881/1-638 PKRAMQFGSR IAKLEKNNEK ASDKCGRLRV ISLENLSIEK EIKT