KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:42 2014 Check: 00 .. Name: ENSP00000366307/1-575 Len: 587 Check: 8715 Weight: 1.00 Name: ENSBTAP00000052487/1-578 Len: 587 Check: 5038 Weight: 1.00 Name: BACU014842/1-486 Len: 587 Check: 1092 Weight: 1.00 Name: bmy_15615T0/1-584 Len: 587 Check: 1200 Weight: 1.00 Name: ENSTTRP00000003225/1-575 Len: 587 Check: 883 Weight: 1.00 // 1 50 ENSP00000366307/1-575 MLGVLVLGAL ALAGLGFPAP AEPQPGGSQC VEHDCFALYP GPATFLNASQ ENSBTAP00000052487/1-578 MLRVLLLGVL APAGLGLPAP PEPQPLGGQC VDLDCFAVFR GPATFLAASR BACU014842/1-486 ---------- --------MP PLLSCLLCSC LGLDALMLSG GS-------- bmy_15615T0/1-584 MLRVLLLGVL APAGLGLPAP PEPQPLGSQC VEHDCFALFR GPATFPAASR ENSTTRP00000003225/1-575 MLRVLLLGVL APAGLGLPAP PEPQPLGSQC VEHDCFALFR GPATFLAASR 51 100 ENSP00000366307/1-575 ICDGLRGHLM TVRSSVAADV ISLLLNGDGG VGRRRLWIGL QLPPGCGDPK ENSBTAP00000052487/1-578 VCERLQGHLM TVRSSVAEDV ISLLLSGDG- ---PRLWIGL QRPPGCDDPE BACU014842/1-486 ---QVRVH-- ---------- ---------- ---QRLWFRL EFNSAAA--- bmy_15615T0/1-584 VCEQLRGHLM TVRSSVAADV ISLLLSGDGG DG-PRLWIGL QLPPGCGDPG ENSTTRP00000003225/1-575 VCEQLRGHLM TVRSSVAADV ISLLLSGDGG DG-PRLWIGL QLPPGCGDPG 101 150 ENSP00000366307/1-575 RLGPLRGFQW VTGDNNTSYS RWARLDLNGA PLCGPLCVAV S-AAEATVPS ENSBTAP00000052487/1-578 HSGPLRGFQW VTGDNRTSFS RWARPHDDGA RLCGPLCVAV SAAAGALAPG BACU014842/1-486 ---------- ---------- -WR------- ---------- -----VAAPX bmy_15615T0/1-584 HREPLRGFQW VTGDNRTSYS RWARPHDDGT PLCGPLCVAV S-AAGAPAPG ENSTTRP00000003225/1-575 HHEPLRGFQW VTGDNRTSYS RWARHHDDGT PLCGPLCVAV S-AAGALAPG 151 200 ENSP00000366307/1-575 EPIWEEQQCE VKADGFLCEF HFPATCRPLA VEPGAAAAA- VSITYGTPFA ENSBTAP00000052487/1-578 EPAWEERPCD AEADGFLCEF HFAASCRPLA VDPGATAAAG LSITYGTPFG BACU014842/1-486 XXXXXELPCG AEADGFLCEF NFAASCRPLV VEPGAAAAVG VSVTYSTPFG bmy_15615T0/1-584 EPAWEELPCG AEADGFLCEF NFAASCRPLV VEPGAAAAAG VSVTYSTPFG ENSTTRP00000003225/1-575 EPAWEELQCG AEANGFLCEF NFAASCRPLV VEPGAAAAAG VSVTYSTPFG 201 250 ENSP00000366307/1-575 ARGADFQALP VGSSAAVAPL GLQLMCTAPP GAVQGHWARE APGAWDCSVE ENSBTAP00000052487/1-578 ARGADFQALP LGSTAAVAPL GVELECAAQP GETEGRWSRE APGAWACGVE BACU014842/1-486 ARGADFQALP LGSSAAVMPL GVKLECAVPP AEAEARWGRE APGAWACSVE bmy_15615T0/1-584 ARGADFQALP LGSSAAVMPL GVKLECAVPP AEAEARWGRE APGAWACSVE ENSTTRP00000003225/1-575 ARGADFQALP LGSSAAVMPL GVKLECAVPP AEAEARWGRE APGAWACSVE 251 300 ENSP00000366307/1-575 NGGCEHACNA IPGAPRCQCP AGAALQADGR SCTASATQSC NDLCEHFCVP ENSBTAP00000052487/1-578 RGGCQHECKG SAGASNCLCP ADAALQADGR SCGLPAEHPC HQLCEHFC-- BACU014842/1-486 GGGCEHACNG SAGASSCLCP ADAALQADGR SCAVPAEHPC HQLCEHFCVP bmy_15615T0/1-584 GGGCEHACNG SAGASSCLCP ADAALQADGR SCAVPAEHPC HQLCEHFCVP ENSTTRP00000003225/1-575 GGGCEHACNE TAGASSCLCP ADTALQADGR SCAVPAEHPC HQLCEHFCVP 301 350 ENSP00000366307/1-575 -NPDQPGSYS CMCETGYRLA ADQHRCEDVD DCILEPSPCP QRCVNTQGGF ENSBTAP00000052487/1-578 -HLHGLGNYT CICEAGYQLA ADQHRCEDVD DCAQLPSPCP QRCVNTEGGF BACU014842/1-486 GFPDAPTNYT CMCATGYRLA ADQHRCEDVD DCMQVPSPCP QSCVNTKGGF bmy_15615T0/1-584 GFPDAPTNYT CMCATGYRLA ADQHRCEDVD DCTQVPSPCP QSCVNTKGGF ENSTTRP00000003225/1-575 GFPDAPTNYT CMCATGYRLA ADQHRCEDVD DCTQVPSPCP QSCVNTKGGF 351 400 ENSP00000366307/1-575 ECHCYPNYDL VDGECVEPVD PCFRANCEYQ CQPLNQTSYL CVCAEGFAPI ENSBTAP00000052487/1-578 QCHCDTGYEL VDGECVDPVD PCFDNNCEYQ CQPVGRSEHK CICAEGFAPV BACU014842/1-486 QCHCFPGFDL VDGECVEPVD PCFGTDCEYQ CQPVGGTDYL CICAEGFAPI bmy_15615T0/1-584 QCHCFPGFDL VDGECVEPVD PCFGTNCEYQ CQPVGGTDYL CICAEGFAPI ENSTTRP00000003225/1-575 QCHCFSGFDL VDGECVETVD PCFGTNCEYQ CQPMGRTDYL CICAEGFVPI 401 450 ENSP00000366307/1-575 PHEPHRCQMF CNQTACPADC DPNTQASCEC PEGYILDDGF ICTDIDECEN ENSBTAP00000052487/1-578 PGAPHKCQMF CNQTSCPADC DPHYPTICRC PEGYIIDEGS TCTDINECDT BACU014842/1-486 PHAPHRCQMF CNQTSCPADC DPNNLAICRC PEGYILDEGS VCTDINECNN bmy_15615T0/1-584 PHAPHRCQMF CNQTSCPADC DPNNLAICRC PEGYILDEGS VCMDINECNN ENSTTRP00000003225/1-575 PHAPHRCQMF CNQTSCPADC DPNNLAVCRC PEGYILDEGS VCTDINECNN 451 500 ENSP00000366307/1-575 GGFCSGVCHN LPGTFECICG PDSALARHIG TDCDSGKVDG -------GDS ENSBTAP00000052487/1-578 -NICPGQCHN LPGTYECICG PDSALSGQIG IDCDPTQVNE -ERGTPEDYG BACU014842/1-486 -GYCPGKCHN LPGTYECICG PDTALFGQTG TDCDPIKVSG GDQGGDEEDG bmy_15615T0/1-584 -GYCPGKCHN LPGTYECICG PDTALFGQAG TDCDPIKVSG GDQGGDEEDG ENSTTRP00000003225/1-575 -GYCPGECRN LPGTYECICG PDTALFGQAG TDCDPIKVSG -------RDG 501 550 ENSP00000366307/1-575 GSGEPPPSPT PGST--LTPP AVGLVHSGLL IGISIASLCL VVALLALLCH ENSBTAP00000052487/1-578 GSGEPPVSPT PGATARPSPA PAGPLHSGVL VGISIASLSL VVALLALLCH BACU014842/1-486 GSGALPGSPT PGATPRPSPP PAGPLHSGVL VGISIASLSL VVALLALLCH bmy_15615T0/1-584 GSGALPGSPT PGATPRPSPP PAGPLHSGVL VGISIASLSL VVALLALLCH ENSTTRP00000003225/1-575 GSGVLPGSPT PGAT--SPPP PAGPLHSGVL VGISIASLSL VVALLALLCH 551 600 ENSP00000366307/1-575 LRKKQGAARA KMEYKCAAPS KEVVLQHVRT ERTPQRL ENSBTAP00000052487/1-578 LRKKQGASRG ELEYKCGVPA KELMLQQVKT ERTPQKL BACU014842/1-486 LRKKQVTSRA ELEYKCGVPA KEVVLQHVKT ERTPQKL bmy_15615T0/1-584 LRKKQVTSRA ELEYKCGVPA KEVVLQHVKT ERTPQKL ENSTTRP00000003225/1-575 LRKKQGTSRA ELEYKCGVPS KEVVLQHVKT ERTPQKL