KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:45 2014 Check: 00 .. Name: ENSP00000300098/1-404 Len: 488 Check: 7712 Weight: 1.00 Name: ENSBTAP00000052513/1-437 Len: 488 Check: 7447 Weight: 1.00 Name: bmy_03899T0/1-448 Len: 488 Check: 6423 Weight: 1.00 Name: BACU008147/1-479 Len: 488 Check: 5024 Weight: 1.00 // 1 50 ENSP00000300098/1-404 ---------- ---------- --------MS VKPSWGP--- ---------- ENSBTAP00000052513/1-437 ----SLQ--- ----QSQ--- -------LHS HSPFSLPAAP QR-------- bmy_03899T0/1-448 MAGMAIQQKS QSDYQSQ--- -------PHG HSPSSLPAAP QQ-------- BACU008147/1-479 MRRAALKPAA KPAPRPQSLQ PPRSSTAVQT CRPSRTRGAP NRETQTQDLS 51 100 ENSP00000300098/1-404 ----GPSE-- ---------- ---------- ---------- -----GVTAV ENSBTAP00000052513/1-437 SRPTGPPQ-- ---------- -----PEVLS TGKLRHLPVL MSATAGPSMA bmy_03899T0/1-448 SRPAGPPG-- ---------- -----PEVLP TGKLRHSLVL MSAT-GPSVA BACU008147/1-479 PKPPGPCGLR PWEHQAAFEA SSLFQPSLLP T---RHSLVL MSAT-GPSVA 101 150 ENSP00000300098/1-404 PTSDLGEIHN WTELLDLFNH TLSECHVELS QSTKRVVLFA LYLAMFVVGL ENSBTAP00000052513/1-437 PTRDVGEIYN WTELLHFFNH TLPECHMELN ENTKRVALFV LYLAIFVVGL bmy_03899T0/1-448 PASEAGEIHN WTELLHFFNH TLPECHMELS ESTKRVALFV LYLAVFVVGL BACU008147/1-479 PASEAGEIHN WTELLHFFNH TLPECHMELS ESTKRVALFV LYLAVFVVGL 151 200 ENSP00000300098/1-404 VENLLVICVN WRGSGRAGLM NLYILNMAIA DLGIVLSLPV WMLEVTLDYT ENSBTAP00000052513/1-437 VENLLVICVN WRGSARAGLL RLYVLNMAIA DLGIILSLPV WMLEATLDYT bmy_03899T0/1-448 VENLLVICVN WRGATRAGLL RLYVLNMAIA DLGIVLSLPV WMLEVTLDYT BACU008147/1-479 VENLLVICVN WRGAARAGLL RLYVLNMAIA DLGIVLSLPV WMLEVTLDYT 201 250 ENSP00000300098/1-404 WLWGSFSCRF THYFYFVNMY SSIFFLVCLS VDRYVTLTSA SPSWQRYQHR ENSBTAP00000052513/1-437 WLWGSFSCRF THYFYYANMY SSIFFLVCLS VDRYVTLTNA STSWQRHQHR bmy_03899T0/1-448 WLWGSFSCRF THYFYFANMY SSIFFLVCLS IDRYVTLTNA SPSWQRHQHR BACU008147/1-479 WLWGSFSCRF THYFYFANMY SSIFFLVCLS IDRYVTLTNA SPSWQRHQHR 251 300 ENSP00000300098/1-404 VRRAMCAGIW VLSAIIPLPE VVHIQLVEGP EPMCLFMAPF ETYSTWALAV ENSBTAP00000052513/1-437 GRRAVCAGVW VLSALIPLPE VVHIRLVDSF EPMCLFMAPF ETYSTWATVV bmy_03899T0/1-448 GRRAVCAGVW VLSALIPLPE VVHIRLVESF EPMCLFMAPF ETYSTWALAV BACU008147/1-479 GRRAVCAGVW VFSALIPLPE VVHIRLVESF EPMCLFMAPF ETYSTWALTV 301 350 ENSP00000300098/1-404 ALSTTILGFL LPFPLITVFN VLTACRLRQP GQPKSRRHCL LLCAYVAVFV ENSBTAP00000052513/1-437 ALSTTVLGFL LPLPLIAVFN VLTARRLRQT GQPEGRRHCL LVCAYIAVFV bmy_03899T0/1-448 ALSTTVLGFL LPFPLIAVFN VLTACRLRRA GQPEGRRHCL LVCAYIAVFV BACU008147/1-479 ALSTTVLGFL LPFPLIAVFN VLTACRLRRA GQPEGRRHCL LVCAYIAVFV 351 400 ENSP00000300098/1-404 MCWLPYHVTL LLLTLHGTHI SLHCHLVHLL YFFYDVIDCF SMLHCVINPI ENSBTAP00000052513/1-437 ICWLPYHLTL LLLTLHGTHI SLHCYLAHLL YFFYDIIDCF SMLHCVVNPI bmy_03899T0/1-448 ICWLPYHVTL LLITLHGTHI SLHCYLAHLL YFFYDIIDCF SMLHCVVNPI BACU008147/1-479 ICWLPYHVTL LLITLHGTHI SLHCYLAHLL YFFYDIIDCF SMLHCVVNPI 401 450 ENSP00000300098/1-404 LYNFLSPHFR GRLLNAVVHY LPKDQTKAGT CA--SSSSCS TQHSIIITKG ENSBTAP00000052513/1-437 LYNFLSPSFR GRLLNAVVHY LPKVQVREGR HA-STSSSSS TQHSIIITKE bmy_03899T0/1-448 LYNFLSPSFR GRLLNAVVHY LPKVQAREGR HASSSSSSSS TQHSIVITKE BACU008147/1-479 LYNFLSPSFR GRLLNAVVHY LPKVQAREGR HA-SSSSSSS TQHSIVITKE 451 500 ENSP00000300098/1-404 DSQPAAAAPH PEPSLSFQAH HLLPNTSPIS PTQPLTPS ENSBTAP00000052513/1-437 GIQPPAAGPH QHPSLNFQAA NTLPTSAP-- --QSLVAS bmy_03899T0/1-448 GIQRPAASPH HHPSLNFQEA DTPPTSAP-- --RALIAS BACU008147/1-479 GIQSPAASPH HHPSLNFQEA DTPPTSAP-- --RALIAS