KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:45 2014 Check: 00 .. Name: ENSP00000258281/1-589 Len: 693 Check: 4725 Weight: 1.00 Name: ENSBTAP00000052514/1-585 Len: 693 Check: 425 Weight: 1.00 Name: BACU009569/1-692 Len: 693 Check: 1327 Weight: 1.00 Name: bmy_20917T0/1-595 Len: 693 Check: 3900 Weight: 1.00 Name: ENSTTRP00000014091/1-589 Len: 693 Check: 3048 Weight: 1.00 // 1 50 ENSP00000258281/1-589 MKRVRTEQIQ MAVSCYLKRR QYVDSDGPLK QGLRLSQTAE EMAANLTV-- ENSBTAP00000052514/1-585 MKRVRTEQIQ MAVSCYLKRR QYGDADGP-K QILRLSQSTE EMAASLTV-- BACU009569/1-692 MKRVRTEQIQ MAVSCYLKRR QYGDADGPLK QGLRLSQSTE EMATSLTVQS bmy_20917T0/1-595 MKRVRTEQIQ MAVSCYLKRR QYGDADGPLK QGLRLSQSTE EMATSLAV-- ENSTTRP00000014091/1-589 MKRVRTEQIQ MAVSCYLKRR QYGDADGPLK QGLRLSQSAE EMATSLAV-- 51 100 ENSP00000258281/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052514/1-585 ---------- ---------- ---------- ---------- ---------- BACU009569/1-692 PTHPPPRGSV QPRYDGVLGE SVFLENHQEK REAFKMRLFS CTLCFVPFVP bmy_20917T0/1-595 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014091/1-589 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000258281/1-589 ---------- ---------- -----QSESG CANIVSAAPC QAEPQQYEVQ ENSBTAP00000052514/1-585 ---------- ---------- -----QSESG CANIVSAAPC QAEPQQYEVQ BACU009569/1-692 LLSRPWVSGG GGVDMSVIFN QKPQLQSESG CANIVSAAPC QAEPQQYEVQ bmy_20917T0/1-595 ---------- ---------- -----QSESG CANIVSAAPC QAEPQQYEVQ ENSTTRP00000014091/1-589 ---------- ---------- -----QSESG CANIVSAAPC QAEPQQYEVQ 151 200 ENSP00000258281/1-589 FGRLRNFLTD SDSQHSHEVM PLLYPLFVYL HLNLVQNSPK STVESFYSRF ENSBTAP00000052514/1-585 FGRLRNFLTD SDSQHSHEVM PLLYPLFVYL HLTLIQNSPK STVESFYSRF BACU009569/1-692 FGRLRNFLTD SESQHSHEVM PLLYPLFVYL HLNLVQNSPK STVESFYSRF bmy_20917T0/1-595 FGRLRNFLTD SESQHSHEVM PLLYPLFVYL HLNLVQNSPK STVESFYSRF ENSTTRP00000014091/1-589 FGRLRNFLTD SESQHSHEVM PLLYPLFVYL HLNLVQSSPK STVESFYSRF 201 250 ENSP00000258281/1-589 HGMFLQNASQ KDVIEQLQTT QTIQDILSNF KLRAFLDNKY VVRLQEDSYN ENSBTAP00000052514/1-585 HGMFLQNASQ KDVIEQLQTT QTIQDILSNF RLRAFLDNKY VVRLQEDSYN BACU009569/1-692 HGMFLQNASQ KDVIEQLQTT QTIQDILSNF RLRAFLDNKY VVRLQEDSYH bmy_20917T0/1-595 HGMFLQNAXQ KDVIEQLQTT QTIQDILSNF RLXAFLDNKY VVRLQEDSYN ENSTTRP00000014091/1-589 HGMFLQNASQ KDVIEQLQTT QTIQDILSNF RLRAFLDNKY VVRLQEDSYN 251 300 ENSP00000258281/1-589 YLIRYLQSDN NTALCKVLTL HIHLDVQPAK RTDYQLYASG SSSRSENNGL ENSBTAP00000052514/1-585 YLLRYLQSDN NTALCRILAW HIHLDVQPAK RTDYQLYTSG GSFRGEGGGL BACU009569/1-692 YLLRYLQSDN NTALCRVLTW HIHLDVQPAK RTDYQLYASG GPSRGEGGGL bmy_20917T0/1-595 YLLRYLQSDN NTALCRVLTW HIHLDVQPAK RTDYQLYASG GPSRGEGGGL ENSTTRP00000014091/1-589 YLLRYLQSDN NTALCRVLTW HIHLDVQPAK RTDYQLYASG GPSRGEGGGL 301 350 ENSP00000258281/1-589 EPPDMPSPIL QNEAALEVLQ ESIKRVKDGP PSLTTICFYA FYNTEQLLNT ENSBTAP00000052514/1-585 EPADMPAPIL QNEAALE--- ESIKRVKDGP PSLTTIYFYA FYNTEQLLNT BACU009569/1-692 EPADVPAPIL QNEAALEVLQ ESIKRVKDGP PSLTTICFYA FYNTEQLLNT bmy_20917T0/1-595 EPADVPAPIL QNEAALEVLQ ESIKRVKDGP PSLTTICFYA FYNTEQLLNT ENSTTRP00000014091/1-589 EPADVPAPIL QNEAALEVLQ ESIKRVKDGP PSLTTICFYA FYNTEQLLNT 351 400 ENSP00000258281/1-589 AEISPDSKLL AAGFDNSCIK LWSLRSKKLK SEPHQVDVSR IHLACDILEE ENSBTAP00000052514/1-585 AEVSPDSKLL AAGFDNSCIK LWSLRSKKLK SEPHQVDVSR IHLACDFLEE BACU009569/1-692 AEVFLDSKLL AAGFDNSCIK LWSLRSKKLK SEPHRVDVSR IHLACDILEK bmy_20917T0/1-595 AEVSPDSRLL AAGFDNSCIK LWSLRSKKLK SEPHQVDVSR IHLACDILEK ENSTTRP00000014091/1-589 AEVSPDSKLL AAGFDNSCIK LWSLRSKKLK SEPHQVDVSR IHLACDILEK 401 450 ENSP00000258281/1-589 E--------- ---------- --------DD EDDNAGTEMK ILRGHCGPVY ENSBTAP00000052514/1-585 E--------- ---------- --------DD EDDNLGTEMK VLRGHCGPVY BACU009569/1-692 EAYEASCSKK FILPPVLPHL ACDILEKEDD EDDNAGTEMR VLRGHCGPVY bmy_20917T0/1-595 EMR------- ---------- ----VSPQDD EDDNAGTEMR VLRGHCGPVY ENSTTRP00000014091/1-589 E--------- ---------- --------DD EDDNAGTEMK VLRGHCGPVY 451 500 ENSP00000258281/1-589 STRFLADSSG LLSCSEDMSI RYWDLGSFTN TVLYQGHAYP VWDLDISPYS ENSBTAP00000052514/1-585 STRFLADSSG LLSCSEDMSI RYWDLGSFTN TVLYQGHAYP VWDLDISPHS BACU009569/1-692 STRFLADSSG LLSCSEDMSI RYWDLGSFTN TVLYRGHAYP VWDLDISPHS bmy_20917T0/1-595 STRFLADSSG LLSCSEDMSI RYWDLGSFTN TVLYRGHAYP VWDLDISPHS ENSTTRP00000014091/1-589 STRFLADSSG LLSCSEDMSI RYWDLGSFTN TVLYQGHAYP VWDLDISPHS 501 550 ENSP00000258281/1-589 LYFASGSHDR TARLWSFDRT YPLRIYAGHL ADVDCVKFHP NSNYLATGST ENSBTAP00000052514/1-585 LYFASASHDR TARLWSFDRT YPLRIYAGHL ADVDCVKFHP NSNYLATGST BACU009569/1-692 LYFASGSHDR TARLWSFDRT HPLRIYAGHL ADVDCVKFHP NSNYLATGST bmy_20917T0/1-595 LYFASGSHBR TARLWSFDRT HPLRIYAGHL ADVDCVKFHP NSNYLATGST ENSTTRP00000014091/1-589 LYFASGSHDR TARLWSFDRT HPLRIYAGHL ADVDCVKFHP NSNYLATGST 551 600 ENSP00000258281/1-589 DKTVRLWSAQ QGNSVRLFTG HRGPVLSLAF SPNGKYLASA GEDQRLKLWD ENSBTAP00000052514/1-585 DKTVRLWSTQ QGNSVRLFTG HRGPVLSLAF SPNGKYLASA GEDQRLKLWD BACU009569/1-692 DKTVRLWSTQ QGNSVRLFTG HRGPVLSLAF SPNGKYLASA GEDQRLKLWD bmy_20917T0/1-595 DKTVRLWSTQ QGNSVRLFTG HRGPVLSLAF SPNGKYLASA GEDQRLKLWD ENSTTRP00000014091/1-589 DKTVRLWSTQ QGNSVRLFTG HRGPVLSLAF SPNGKYLASA GEDQRLKLWD 601 650 ENSP00000258281/1-589 LASGTLYKEL RGHTDNITSL TFSPDSGLIA SASMDNSVRV WDIRNTYCSA ENSBTAP00000052514/1-585 LASGTLYKEL RGHTDNITSL TFSPDSSLVA SASMDNSVRV WDIRSSHCST BACU009569/1-692 LASGTLYKEL RGHTDSVTSL TFSPDSSLLA SASMDNSVRV WDIRSAHCSA bmy_20917T0/1-595 LASGTLYKEL RGHTDSITSL TFSPDSSLVA SASMDNSVRV WDIRSAHCSA ENSTTRP00000014091/1-589 LASGTLYKEL RGHTDNITSL TFSPDSSLIA SASMDNSVRI WDIRSAHCSA 651 700 ENSP00000258281/1-589 PADGSSSELV GVYTGQMSNV LSVQFMACNL LLVTGITQEN QEH ENSBTAP00000052514/1-585 PADGSSSELV GVYTGQMSNV LSVQFMACNL LLVTGITQEN QEH BACU009569/1-692 PADGSSSELV GVYTGQTSNV LSVQFMACNL LLVTGITQE- KEH bmy_20917T0/1-595 PADGSSSELV GVYTGQMSNV LSVQFMACNL LLVTGITQED QEH ENSTTRP00000014091/1-589 PADGSSSELV GVYTGQMSNV LSVQFMACNL LLVTGITQEN QEH