KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:46 2014 Check: 00 .. Name: bmy_22539T0/1-170 Len: 517 Check: 8015 Weight: 1.00 Name: ENSP00000303076/1-309 Len: 517 Check: 4552 Weight: 1.00 Name: BACU017262/1-517 Len: 517 Check: 73 Weight: 1.00 Name: ENSBTAP00000052536/1-306 Len: 517 Check: 7969 Weight: 1.00 // 1 50 bmy_22539T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000303076/1-309 ---------- ---------- ---------- ---------- ---------- BACU017262/1-517 MAHDRHAAVC KPLHYTTTVT TSVCAQRAIG CYVWGFAQSA IHTGFTFCLS ENSBTAP00000052536/1-306 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_22539T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000303076/1-309 ---------- ---------- ---------- ---------- ---------- BACU017262/1-517 FCHSNMVHHF FCDIPPILAL SCSDIYINEI VLFTLAAFNV FFALIVTLTS ENSBTAP00000052536/1-306 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_22539T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000303076/1-309 ---------- ---------- ---------- ---------- ---------- BACU017262/1-517 YLFIFIAILR MHSADGRKKA FSTCTSHLTA VTIFYGTVIF MYLQPSSSHS ENSBTAP00000052536/1-306 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_22539T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000303076/1-309 ---------- ---------- ---------- ---------- ---------- BACU017262/1-517 MGNDQMASVE PYSLRNKEMS HYHLHLGDRE NKALRSYIKN NVSQIVKENL ENSBTAP00000052536/1-306 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_22539T0/1-170 ---MENGTEV TDFILVGLTN VPELQIPLFI VFTLIFLIST FGNLGMITLI ENSP00000303076/1-309 ---MENCTEV TKFILLGLTS VPELQIPLFI LFTFIYLLTL CGNLGMMLLI BACU017262/1-517 DILMENGTEV TDFILVGLTN TPELQIPLFI VFTLIFLISA FGNLGMITLI ENSBTAP00000052536/1-306 ---MENGTEV TDFILVGLTN APELQIPLFI VFTLIYLISV LGNLGMITLI 251 300 bmy_22539T0/1-170 LLDSRLHTPM YFFIINLSLV DFGYSSAVTP KVMAGFLRGD KIISYNACAA ENSP00000303076/1-309 LMDSCLHTPM YFFLSNLSLV DFGYSSAVTP KVMAGFLRGD KVISYNACAV BACU017262/1-517 LLDSHLHTPM YFFIINLSLV DFGYSSAVTP KVMAGFLRGD KIISYNACAA ENSBTAP00000052536/1-306 LLDSCLHTPM YFFIINLSLV DFGYSSAVTP KVMAGFLRAD KVISYNACAT 301 350 bmy_22539T0/1-170 QMFLFAAFAS VENFLLASMA YDRYAAA--- ---------- ---------- ENSP00000303076/1-309 QMFFFVALAT VENYLLASMA YDRYAAVCKP LHYTTTMTAS VGACLALGSY BACU017262/1-517 QMFLFAAFAS VENFLLASMA YDRYAAVCKP LHYTITMTTS VCTRLAIGSY ENSBTAP00000052536/1-306 QIFFFAAFAS VENFLLAAMA YDRHAAVCEP LHYTITMKKS VCAHLAIGSY 351 400 bmy_22539T0/1-170 ---------- ----FSLPHA RGNI------ ---------- ---HVNQ--- ENSP00000303076/1-309 VCGFLNASFH IGGIFSLSFC KSNLVHHFFC DVPAVMALSC SDKHTSEVIL BACU017262/1-517 ACGFLNASIH VGGTFSLSFC KSNVVHHFFC DIPAVMAVSC SDKHISEVVL ENSBTAP00000052536/1-306 VCGFVNASIH VGGTFSLSLC ESKLVHHFFC DIPAVMALSC SDKHVREVVL 401 450 bmy_22539T0/1-170 ---------- ---------- ---------W DKQGYEQ--- ------KHIR ENSP00000303076/1-309 VFMSSFNIFF VLLVIFISYL FIFITILKMH SAKGHQKALS TCASHFTAVS BACU017262/1-517 VLISSFNVFF ALLVILISYL FISITVLKRH SAKGYQKGLS TCASHLSAVS ENSBTAP00000052536/1-306 ILISGFNVFF ALLVIFISYL LIFITVLKMH SAKGYQKALS TCASHLSAVS 451 500 bmy_22539T0/1-170 VLYVDMW--- -----SHTHD SG-------- --INVSNT-- ---------- ENSP00000303076/1-309 VFYGTVIFIY LQPSSSHSMD TDKMASVFYA MIIPMLNPVV YSLRNREVQN BACU017262/1-517 IFYGTVIFMY LQPSSNHSMD TDKVASVFYA MVIPMLNPIV YSLRNKEVKS ENSBTAP00000052536/1-306 IFYGTIIFMY LQPSSNHSMD TDKVASVFYA MVIPMLNPIV YSLRNKEVKS 501 550 bmy_22539T0/1-170 ---------- ------- ENSP00000303076/1-309 AFKKVLRRQK FL----- BACU017262/1-517 AFKKVLGKAK FSLAFGF ENSBTAP00000052536/1-306 AFKILMLHD- -------