KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:47 2014 Check: 00 .. Name: ENSP00000357156/1-347 Len: 826 Check: 5389 Weight: 1.00 Name: ENSBTAP00000052573/1-453 Len: 826 Check: 2510 Weight: 1.00 Name: ENSTTRP00000005828/1-342 Len: 826 Check: 7696 Weight: 1.00 Name: bmy_15529T0/1-341 Len: 826 Check: 2711 Weight: 1.00 Name: BACU003912/1-696 Len: 826 Check: 1521 Weight: 1.00 // 1 50 ENSP00000357156/1-347 MALLFSLILA ICTRPGFLAS PSGVRLVGGL HRCEGRVEVE QKGQWGTVCD ENSBTAP00000052573/1-453 MALFFFLIFA FSTGPGLLES PPKVRLVRGP HRCEGRVEVE RNGEWGTVCD ENSTTRP00000005828/1-342 MALLFFLILA FCTGLGLSES SSRTRLVGGR HRCEGRVEVE RDGQWGTVCD bmy_15529T0/1-341 MALLFFLILA FCNGLGLLES SSRVRLVGGR HRCEGRVEVE RDGQWGTVCD BACU003912/1-696 ---------- ---------- --RVRLVGGR HRCEGRVEVE RDGQWGTVCD 51 100 ENSP00000357156/1-347 DGWDIKDVAV LCRELGCGAA SGTPSGILYE PPAEKEQKVL IQSVSCTGTE ENSBTAP00000052573/1-453 DGWNLKDVEV VCRELGCGAA KGTPSGNLYK PLADEKQKIF IQDVNCNGTE ENSTTRP00000005828/1-342 DGWDMKDVEV VCRELGCGAA TGTPSGTLYK PLAEKDQKVL IQAVNCSGME bmy_15529T0/1-341 DGWDMKDVEV VCRELGCGAA TGAPSGILYK PLAEKDQKVL IQVVSCSGME BACU003912/1-696 DGWDMKDVEV VCRELGCGAA TGTPSGTLYK PLAEKDQKVL IQGVSCSGME 101 150 ENSP00000357156/1-347 DTLAQCEQEE -VYDCSHDED AGASCEN-PE ---------- ---------- ENSBTAP00000052573/1-453 DELIECDRVE DVFDCSHSED AGAICEKSPP KVRLVRGPHR CEGRVEVERN ENSTTRP00000005828/1-342 SKLIHCEQEE DVFDCSHNED AGVMCEIVPE ---------- ---------- bmy_15529T0/1-341 SKLIDCEQEE DVFDCSHNED AGAKCEI-PE ---------- ---------- BACU003912/1-696 SELIHCEQEE DVFDCSHSED AGAKCDI-PE ---------- ---------- 151 200 ENSP00000357156/1-347 ---------- ---------- ---------- ----SSFSPV PE-------- ENSBTAP00000052573/1-453 GEWGTVCDNG WNMKDVEVVC RELGCGAAKG TPSRNLYKPL ADEKQKIFIQ ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000357156/1-347 ---------- ---------- ---------- -------GVR LADGPGHCKG ENSBTAP00000052573/1-453 DVNCNGTEDE LIECDRVEDD IFSKKDSELG APLCGKGTVR LVDGPGRCKG ENSTTRP00000005828/1-342 ---------- ---------- ---------- -------TVR LVGGPGRCKG bmy_15529T0/1-341 ---------- ---------- ---------- -------TVR LVGGPDHCKG BACU003912/1-696 ---------- ---------- ---------- -------TVR LVGGPDHCKG 251 300 ENSP00000357156/1-347 RVEVKHQNQW YTVCQTGWSL RAAKVVCRQL GCGRAVLTQK RCNKHAYGRK ENSBTAP00000052573/1-453 RLEVKHQKQW GTVCKAGWNL SAAKVVCRQL GCGKATLIKR CCNKDTQGQG ENSTTRP00000005828/1-342 RVEVKHREQW GTVCKAGWNL SAAKVVCRQL GCGRATLTQR CCNKDTQGQG bmy_15529T0/1-341 RVEVKHQEQW GTVCKAGWNL SAAKVVCRQL GCGRAILTQR CCNKDTQGQG BACU003912/1-696 RVEVKHQQQW GTVCKAGWNL SAAKVVCRQL GCGRAILTQR SCNKDTQGQG 301 350 ENSP00000357156/1-347 PIWLSQMSCS GREATLQDCP SGPWGKNTCN HDEDTWVECE DPFDLRLVGG ENSBTAP00000052573/1-453 LIWLSNVSCS GQEEDLQHCL SGLEGYNNCT HDEDTWVECE DPFKLRLVNG ENSTTRP00000005828/1-342 PIWLSKVSCS GQEGNLHDCP SGLWGNNNCT HDEDTWVECE DSFDLRLVGG bmy_15529T0/1-341 PIWLSEVSCS GQEESLQDCP SGLWGKNNCT HDEDTWVECE DPFDLRLVGG BACU003912/1-696 PIWLSEVSCS GQEGNLQDCS SGLWGKNNCT HDEDTWVECE DPFDLRLVGG 351 400 ENSP00000357156/1-347 DNLCSGRLEV LHKGVWGSVC DDNWGEKEDQ VVCKQLGCGK SLSPSFRDRK ENSBTAP00000052573/1-453 DTSCSGRLEV LHKGIWGSVC DDGWAKKEEQ VVCQQLGCGK PIFVPAKARK ENSTTRP00000005828/1-342 DTRCSGRLEV LHKGEWGSVC DDGWGEKEEQ VVCKQLGCGE SIFLSAKARR bmy_15529T0/1-341 DTRCSGRLEV LHKGEWGSVC DDGWGEKEEQ VVCKQLGCGE SIFLSAKARR BACU003912/1-696 DSRCSGRLEV LHKGEWGSVC DDGWGENEEQ VVCKQLGCGE PIFLSAKARR 401 450 ENSP00000357156/1-347 CYGPGVGRIW LDNVRCSGEE QSLEQCQHRF WGFHDCTHQE DVAVICSG-- ENSBTAP00000052573/1-453 KFVPGNGRIW LDDVHCKGEE QSLEQCQHRS WGYHDCNHKE DVVVFCLEGQ ENSTTRP00000005828/1-342 NFGLGAGRIW LDDVHCSGKE QSLEQCRHRF WGHHNCNHKE DVAVTCLEL- bmy_15529T0/1-341 NFGLGAGRIW LDDIHCSGKE QSLEQCRHRF WGHHNCNHKE DVAMTCLEL- BACU003912/1-696 NFGLGAGRIW LDDVHCSGNE QSLEQCRHRF WGYHNCNHKE DVAMTCLELF 451 500 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 PDI------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 LIVSPSPPIE GNSMTLACKT QPPPQKLDVQ LQFRFYKDGR PLGLEGDSIP 501 550 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 ELWIPVVWRE DSGSYWCQAK TTPLRVKWSR RVQIQVHGVP ISNVNLEIQP 551 600 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 PGGYLMEGEK LVLVCLVTGG TGDITFFWYK GVLGLNLETK TQRSLTATFE 601 650 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 IPVVRESDSE QYYCAADNGY GPRLSELVNI TVRKHSGNYY CEANNGLVAQ 651 700 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 RSEVVPLNII GIAHAVELLR SMSVSQHSGR VLLIPQSFWW CATKDEASMG 701 750 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 SPVLGDVSEG AWGTSKLVPL FSHQCDKLQI PRCINKSYLP TSPRKSRPCL 751 800 ENSP00000357156/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052573/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005828/1-342 ---------- ---------- ---------- ---------- ---------- bmy_15529T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003912/1-696 NPHSRYLLSK PKPFSLAAHV QVSPFSAYGG QKRSSYFKSH GGAAWHLWSH 801 850 ENSP00000357156/1-347 ---------- ---------- ------ ENSBTAP00000052573/1-453 ---------- ---------- ------ ENSTTRP00000005828/1-342 ---------- ---------- ------ bmy_15529T0/1-341 ---------- ---------- ------ BACU003912/1-696 HYGPIILLLA QEKNRFVFIE IGILLL