KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:49 2014 Check: 00 .. Name: ENSTTRP00000008821/1-650 Len: 692 Check: 7999 Weight: 1.00 Name: ENSBTAP00000052600/1-654 Len: 692 Check: 6111 Weight: 1.00 Name: ENSP00000347169/1-651 Len: 692 Check: 9886 Weight: 1.00 Name: bmy_03572T0/1-627 Len: 692 Check: 3224 Weight: 1.00 Name: BACU010793/1-669 Len: 692 Check: 6378 Weight: 1.00 // 1 50 ENSTTRP00000008821/1-650 ---------- ---------- --MNKLRQSF RRKKDVYVPE ASRPHQWQTD ENSBTAP00000052600/1-654 ---------- ---------- --MNKLRQSF RRKKDVYVPE ASRPHQWQTD ENSP00000347169/1-651 ---------- ---------- --MNKLRQSF RRKKDVYVPE ASRPHQWQTD bmy_03572T0/1-627 MYEDLLAVKV ATNGAKLLVK IKMNKLRQSF RRKKDVYVPE ASRPHQWQTD BACU010793/1-669 ---------- ---------- --MNKLRQSF RRKKDVYVPE ASRPHQWQTD 51 100 ENSTTRP00000008821/1-650 EEGVRTGKCS FPVK------ ---------- YLGHVEVDES RGMHICEDAV ENSBTAP00000052600/1-654 EEGVRSGKCS FPVK------ ---------- YLRYVEVDKE RSTHIHETAF ENSP00000347169/1-651 EEGVRTGKCS FPVK------ ---------- YLGHVEVDES RGMHICEDAV bmy_03572T0/1-627 EEGVRTGKCS FPVK------ ---------- ---------- ---------- BACU010793/1-669 EEGVRTGKCS FPVKLLETFI LNLSHMRTLR YLGHVEVDES RGMHICEDAV 101 150 ENSTTRP00000008821/1-650 KRLKAERKFF KGFFG-KXXX XXXXXXXXXX XXXXXXXXXX XXDLIVDQTI ENSBTAP00000052600/1-654 QEKKKERKFF KGFFGKKTGK KAVKAVLWVS ADGLRVVDEK TKDLIVDQTI ENSP00000347169/1-651 KRLKAERKFF KGFFG-KTGK KAVKAVLWVS ADGLRVVDEK TKDLIVDQTI bmy_03572T0/1-627 -----ERKFF KGFFG-KTGK KAVKAVLWVS ADGLRVVDEK TKDLIVDQTI BACU010793/1-669 KRLKAERKFF KGFFG-KTGK KAVKAVLWVS ADGLRVVDEK TKDLIVDQTI 151 200 ENSTTRP00000008821/1-650 EKVSFCAPDR NFDRAFSYIC RDGTTRRWIC HCFMAVKDTG ERLSHAVGCA ENSBTAP00000052600/1-654 EKVSFCAPDR NFDRAFSYIC RDGTTRRWIC HCFMAVKDTG ERLSHAVGCA ENSP00000347169/1-651 EKVSFCAPDR NFDRAFSYIC RDGTTRRWIC HCFMAVKDTG ERLSHAVGCA bmy_03572T0/1-627 EKVSFCAPDR NFDRAFSYIC RDGTTRRWIC HCFMAVKDTG ERLSHAVGCA BACU010793/1-669 EKVSFCAPDR NFDRAFSYIC RDGTTRRWIC HCFMAVKDTG ERLSHAVGCA 201 250 ENSTTRP00000008821/1-650 FAACLERKQK REKECGVTAT FDASRTTFTR EGSFRVTTAT EQAEREEIMK ENSBTAP00000052600/1-654 FAACLERKQK REKECGVTAT FDASRTTFTR EGSFRVTTAT EQAEREEIMK ENSP00000347169/1-651 FAACLERKQK REKECGVTAT FDASRTTFTR EGSFRVTTAT EQAEREEIMK bmy_03572T0/1-627 FAACLERKQK REKECGVTAT FDASRTTFTR EGSF------ ---------- BACU010793/1-669 FAACLERKQK REKECGVTAT FDASRTTFTR EGSFRVTTAT EQAEREEIMK 251 300 ENSTTRP00000008821/1-650 QIQDAKKAET DKTVVGSSVA PGNTAPSPSS PTSPTSDATA SLEMNNPHAI ENSBTAP00000052600/1-654 QIQDAKKADT DKTAVGSSVA PGNIATSPSS PTSPTLDATA SLEMNNPHAI ENSP00000347169/1-651 QMQDAKKAET DKIVVGSSVA PGNTAPSPSS PTSPTSDATT SLEMNNPHAI bmy_03572T0/1-627 -------PET DKTVVGSSVA PGNTAPSPSS PTSPTSDATA SLEMNNPHAI BACU010793/1-669 QIQDAKKAET DKTVVGSSVA PGNTAPSPSS PTSPTSDATA SLEMNNPHAI 301 350 ENSTTRP00000008821/1-650 PRRHAPIEQL ARQGSFRGFP ALSQKMSPFK RQLSLRINEL PSTMQRKTDF ENSBTAP00000052600/1-654 PRRHAPIEQL ARQGSFRGFP ALSQKMSPFK RQLSLRINEL PSTMQRKTDF ENSP00000347169/1-651 PRRHAPIEQL ARQGSFRGFP ALSQKMSPFK RQLSLRINEL PSTMQRKTDF bmy_03572T0/1-627 PRRHAPIEQL ARQGSFRGFP ALSQKMSPFK RQLSLRINEL PSTMQRKTDF BACU010793/1-669 PRRHAPIEQL ARQGSFRGFP ALSQKMSPFK RQLSLRINEL PSTMQRKTDF 351 400 ENSTTRP00000008821/1-650 PIKNAVPEVE GEAESISSLC SQITNAFSTP SEDPFSSAPM TKPVTVVAPQ ENSBTAP00000052600/1-654 PIKHTVPEVD GEAESISSLC SQITSAFSTP SEDPFSSAPM TKPVTVVAPQ ENSP00000347169/1-651 PIKNAVPEVE GEAESISSLC SQITNAFSTP -EDPFSSAPM TKPVTVVAPQ bmy_03572T0/1-627 PIKNAVPEVE GEVESISSLC SQITSAFSTA SEDPFSSAPM TKPVTVVAPQ BACU010793/1-669 PIKNAVPEVE GEAESISSLC SQITSAFSTP SEDPFSSAPM TKPGTVVAPQ 401 450 ENSTTRP00000008821/1-650 SPAFQANGTD SAFHVLAAKP AHTALAPVAM PVRETNPWAY APDAANKGIA ENSBTAP00000052600/1-654 SPAFQANGTD SAFHVLAAKP APTALAPVAM PVRETNPWAY APDAANKGIA ENSP00000347169/1-651 SPTFQANGTD SAFHVL-AKP AHTALAPVAM PVRETNPWAH APDAANKEIA bmy_03572T0/1-627 SPAFQANGTD SAFHVLAAKP AHTALAPVAM PVRETNPWAY APDAANKGIA BACU010793/1-669 SPAFQANGTD SAFHVLAAKP AHTALAPVAM PVRETNPWAY APDAANKGIA 451 500 ENSTTRP00000008821/1-650 ATHSGTEWGQ SSGAVSPGLF QAGHRRTPSE ADRWLEEVSK CVRAQQPQAS ENSBTAP00000052600/1-654 ATHSGTEWGQ SSGAVSPGLF QAGHRRTPSE ADRWLEEVSK SVRAQQPQAS ENSP00000347169/1-651 ATCSGTEWGQ SSGAASPGLF QAGHRRTPSE ADRWLEEVSK SVRAQQPQAS bmy_03572T0/1-627 ATHSGTEWGQ SSGAVSPGLF QAGHRRTPSE ADRWLEEVSK CVRAQQPQAS BACU010793/1-669 ATHSGTEWGQ SSGAVSPGLF QAGHRRTPSE ADRWLEEVSK CVRAQQPQAS 501 550 ENSTTRP00000008821/1-650 AAPLQPVLQP PPPSAISQPA PPFQGNAFLT SQPVPVGVVP PLQPAFVPAQ ENSBTAP00000052600/1-654 AAPLQPVLQP PPPTAISQPV PPFQGNAFLT SQPVPVGVVP PLQPAFVAAQ ENSP00000347169/1-651 AAPLQPVLQP PPPTAISQPA SPFQGNAFLT SQPVPVGVVP ALQPAFVPAQ bmy_03572T0/1-627 AAPLXPVLQP PPPSAISQPA PPFQGNAFLT SQPVPVGVVP PLQPAFVPAQ BACU010793/1-669 AAPLQPVLQP PPPSAISQPA PPFQGNAFLT SQPVPVGVVP PLQPAFVPAQ 551 600 ENSTTRP00000008821/1-650 SYPVANGMTY PAPNVPVVGI TPSQMVANVF GTA-HP-AAQ PHQSP-LVQQ ENSBTAP00000052600/1-654 SYPVANGMTY PASNVPVVGI TPSQMVANVF GTAGHPQAAQ PHQSPSLVKQ ENSP00000347169/1-651 SYPVANGMPY PAPNVPVVGI TPSQMVANVF GTAGHPQAAH PHQSPSLVRQ bmy_03572T0/1-627 SYPVANGMTY PAPNVPVVGI TPSQMXANVF GTAGHPQATQ PHXSPNLVKQ BACU010793/1-669 SYPVANGMTY PAPNVPVVGI TPSQMVANVF GTAGHPQATQ PHQSPNLVKQ 601 650 ENSTTRP00000008821/1-650 QTFPQYETSS ATASPFFXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000052600/1-654 QTFPQYETSS ATASPFFKPP AQHLNGSAAL NGVDDSRLAS GDKQTEAPAG ENSP00000347169/1-651 QTFPHYEASS ATTSPFFKPP AQHLNGSAAF NGVDDGRLAS ADRHTEVPTG bmy_03572T0/1-627 QTFPQYETSS ATASPFFKPP AQHLNGSAAF NGVDDGRLAS GDKHTEVPAG BACU010793/1-669 QTFPQYETSS ATASPFFKPP AQHLNGSAAF NGVDDGRLAS GDKHTEVPAG 651 700 ENSTTRP00000008821/1-650 XXPVDHFEAQ WAALESKSKQ RTNPSPTNPF SSDLQKTFEI EL ENSBTAP00000052600/1-654 TCTVDPFEAQ WAALESKSKQ RTNPSPTNPF SSDLQKTFEI EL ENSP00000347169/1-651 TCPVDPFEAQ WAALENKSKQ RTNPSPTNPF SSDLQKTFEI EL bmy_03572T0/1-627 TCPVDPFEAQ WAALESKSKQ RTNPSPTNPF SSDLQKTFEI EL BACU010793/1-669 TCPVDPFEAQ WAALESKSKQ RTNPSPTNPF SSDLQKTFEI EL