KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:50 2014 Check: 00 .. Name: bmy_12629T0/1-485 Len: 621 Check: 313 Weight: 1.00 Name: ENSP00000341342/1-621 Len: 621 Check: 945 Weight: 1.00 Name: ENSBTAP00000052629/1-621 Len: 621 Check: 1551 Weight: 1.00 Name: BACU020117/1-523 Len: 621 Check: 7998 Weight: 1.00 Name: ENSTTRP00000012988/1-521 Len: 621 Check: 7181 Weight: 1.00 // 1 50 bmy_12629T0/1-485 ---------- ---------- ---------- ---------- ---------- ENSP00000341342/1-621 MLMAGQRGAW TMGDVVEKSL EGPLAPSTDE PSQKTGDLVE ILNGEKVKFD ENSBTAP00000052629/1-621 VLMAGQRGTW TMDDVVEKSL EGPLALSTDE PPEKRGDLVE ILNGDKVKFD BACU020117/1-523 MLMAGQRGTW TMDNVVEKSL EGPLAPSTDE PSQKRGDLVE ILNGDKVKFD ENSTTRP00000012988/1-521 MLMAGQRGTW TMDNVVEKSL EGPLAPSTDE PSQKRGDLVE ILNGDKVKFD 51 100 bmy_12629T0/1-485 ---------- ---------- ---------- ---------- ---------M ENSP00000341342/1-621 DAGLSLILQN GLETLRMENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM ENSBTAP00000052629/1-621 DTGLSLILQN GLETLRVENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM BACU020117/1-523 DTGLSLILQN GLETLRVENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM ENSTTRP00000012988/1-521 DTGLSLILQN GLETLRVENS LTDVTLCVDI QEFSCHRVVL AAASNYFRAM 101 150 bmy_12629T0/1-485 FCNDLKEKYE ERIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN ENSP00000341342/1-621 FCNDLKEKYE KRIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN ENSBTAP00000052629/1-621 FCNDLKEKYE KRIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN BACU020117/1-523 FCNDLKEKYE ERIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN ENSTTRP00000012988/1-521 FCNDLKEKYE ERIIIKGVDA ETMHTLLNYT YTSKALITKQ NVQRVLEAAN 151 200 bmy_12629T0/1-485 LFQ----ANA GKVYLP---- --FCSGGCHL -NTHSLDSLK KQVQSYIIQN ENSP00000341342/1-621 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN ENSBTAP00000052629/1-621 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN BACU020117/1-523 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN ENSTTRP00000012988/1-521 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN 201 250 bmy_12629T0/1-485 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER ENSP00000341342/1-621 FVQILNSEEF LDLPVDTLHH ILKSDDLYVT EEAQVFETVM SWVRHKPSER ENSBTAP00000052629/1-621 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EEAQVFETVM SWVRHKQSER BACU020117/1-523 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER ENSTTRP00000012988/1-521 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER 251 300 bmy_12629T0/1-485 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS ENSP00000341342/1-621 LCLLPYVLEN VRLPLLDPWY FVETVEADPL IRQCPEVFPL LQEARMYHLS ENSBTAP00000052629/1-621 LCLLPYILEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS BACU020117/1-523 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS ENSTTRP00000012988/1-521 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS 301 350 bmy_12629T0/1-485 GNE------- ---------- ---------D ERFVAEVTCL DPLRRSRLEV ENSP00000341342/1-621 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV ENSBTAP00000052629/1-621 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV BACU020117/1-523 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV ENSTTRP00000012988/1-521 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV 351 400 bmy_12629T0/1-485 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK ENSP00000341342/1-621 AKLPLTEHEL ESENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK ENSBTAP00000052629/1-621 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK BACU020117/1-523 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK ENSTTRP00000012988/1-521 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK 401 450 bmy_12629T0/1-485 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE ENSP00000341342/1-621 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE ENSBTAP00000052629/1-621 WIQIEYLNIG RWRHKMVVLG GKVYVLGGFD GLQRINNVET YDPFHNCWSE BACU020117/1-523 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE ENSTTRP00000012988/1-521 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE 451 500 bmy_12629T0/1-485 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS ENSP00000341342/1-621 AAPLLVHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWSLKA ENSBTAP00000052629/1-621 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS BACU020117/1-523 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS ENSTTRP00000012988/1-521 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS 501 550 bmy_12629T0/1-485 TMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS ENSP00000341342/1-621 AMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS ENSBTAP00000052629/1-621 AMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS BACU020117/1-523 TMPVEAKCIN AVSFRDRIYV VGK------- ---------- ---------- ENSTTRP00000012988/1-521 TMPVEAKCIN AVSFRDRIYV V--------- ---------- ---------- 551 600 bmy_12629T0/1-485 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG ENSP00000341342/1-621 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG ENSBTAP00000052629/1-621 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG BACU020117/1-523 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012988/1-521 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_12629T0/1-485 SVTIRKSYTH IRRIVPGAVS V ENSP00000341342/1-621 SVTIRKSYTH IRRIVPGAVS V ENSBTAP00000052629/1-621 SVTIRKSYTH IRRIVPGAVS V BACU020117/1-523 ---------- ---------- - ENSTTRP00000012988/1-521 ---------- ---------- -