KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 18:01:50 2014 Check: 00 ..
Name: bmy_12629T0/1-485 Len: 621 Check: 313 Weight: 1.00
Name: ENSP00000341342/1-621 Len: 621 Check: 945 Weight: 1.00
Name: ENSBTAP00000052629/1-621 Len: 621 Check: 1551 Weight: 1.00
Name: BACU020117/1-523 Len: 621 Check: 7998 Weight: 1.00
Name: ENSTTRP00000012988/1-521 Len: 621 Check: 7181 Weight: 1.00
//
1 50
bmy_12629T0/1-485 ---------- ---------- ---------- ---------- ----------
ENSP00000341342/1-621 MLMAGQRGAW TMGDVVEKSL EGPLAPSTDE PSQKTGDLVE ILNGEKVKFD
ENSBTAP00000052629/1-621 VLMAGQRGTW TMDDVVEKSL EGPLALSTDE PPEKRGDLVE ILNGDKVKFD
BACU020117/1-523 MLMAGQRGTW TMDNVVEKSL EGPLAPSTDE PSQKRGDLVE ILNGDKVKFD
ENSTTRP00000012988/1-521 MLMAGQRGTW TMDNVVEKSL EGPLAPSTDE PSQKRGDLVE ILNGDKVKFD
51 100
bmy_12629T0/1-485 ---------- ---------- ---------- ---------- ---------M
ENSP00000341342/1-621 DAGLSLILQN GLETLRMENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM
ENSBTAP00000052629/1-621 DTGLSLILQN GLETLRVENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM
BACU020117/1-523 DTGLSLILQN GLETLRVENA LTDVILCVDI QEFSCHRVVL AAASNYFRAM
ENSTTRP00000012988/1-521 DTGLSLILQN GLETLRVENS LTDVTLCVDI QEFSCHRVVL AAASNYFRAM
101 150
bmy_12629T0/1-485 FCNDLKEKYE ERIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN
ENSP00000341342/1-621 FCNDLKEKYE KRIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN
ENSBTAP00000052629/1-621 FCNDLKEKYE KRIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN
BACU020117/1-523 FCNDLKEKYE ERIIIKGVDA ETMHTLLDYT YTSKALITKQ NVQRVLEAAN
ENSTTRP00000012988/1-521 FCNDLKEKYE ERIIIKGVDA ETMHTLLNYT YTSKALITKQ NVQRVLEAAN
151 200
bmy_12629T0/1-485 LFQ----ANA GKVYLP---- --FCSGGCHL -NTHSLDSLK KQVQSYIIQN
ENSP00000341342/1-621 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN
ENSBTAP00000052629/1-621 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN
BACU020117/1-523 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN
ENSTTRP00000012988/1-521 LFQFLRMVDA CASFLTEALN PENCVGILRL ADTHSLDSLK KQVQSYIIQN
201 250
bmy_12629T0/1-485 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER
ENSP00000341342/1-621 FVQILNSEEF LDLPVDTLHH ILKSDDLYVT EEAQVFETVM SWVRHKPSER
ENSBTAP00000052629/1-621 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EEAQVFETVM SWVRHKQSER
BACU020117/1-523 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER
ENSTTRP00000012988/1-521 FVQILNSEEF LELPVDTLYH ILKSDDLYVT EESQVFETVM SWVRHKQSER
251 300
bmy_12629T0/1-485 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS
ENSP00000341342/1-621 LCLLPYVLEN VRLPLLDPWY FVETVEADPL IRQCPEVFPL LQEARMYHLS
ENSBTAP00000052629/1-621 LCLLPYILEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS
BACU020117/1-523 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS
ENSTTRP00000012988/1-521 LCLLPYVLEN VRLPLLDPWY FVEMVEADPL IRQCPEVFPL LQEARMYHLS
301 350
bmy_12629T0/1-485 GNE------- ---------- ---------D ERFVAEVTCL DPLRRSRLEV
ENSP00000341342/1-621 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV
ENSBTAP00000052629/1-621 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV
BACU020117/1-523 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV
ENSTTRP00000012988/1-521 GNEIISERTK PRMHEFQSEV FMIIGGCTKD ERFVAEVTCL DPLRRSRLEV
351 400
bmy_12629T0/1-485 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK
ENSP00000341342/1-621 AKLPLTEHEL ESENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK
ENSBTAP00000052629/1-621 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK
BACU020117/1-523 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK
ENSTTRP00000012988/1-521 AKLPMTEHEL DSENKKWVEF ACVTLKNEVY ISGGKETQHD VWKYNSSINK
401 450
bmy_12629T0/1-485 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE
ENSP00000341342/1-621 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE
ENSBTAP00000052629/1-621 WIQIEYLNIG RWRHKMVVLG GKVYVLGGFD GLQRINNVET YDPFHNCWSE
BACU020117/1-523 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE
ENSTTRP00000012988/1-521 WIQIEYLNIG RWRHKMVVLG GKVYVIGGFD GLQRINNVET YDPFHNCWSE
451 500
bmy_12629T0/1-485 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS
ENSP00000341342/1-621 AAPLLVHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWSLKA
ENSBTAP00000052629/1-621 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS
BACU020117/1-523 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS
ENSTTRP00000012988/1-521 AAPLLIHVSS FAATSHKKKL YVIGGGPNGK LATDKTQCYD PSTNKWNLKS
501 550
bmy_12629T0/1-485 TMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS
ENSP00000341342/1-621 AMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS
ENSBTAP00000052629/1-621 AMPVEAKCIN AVSFRDRIYV VGGAMRALYA YSPLEDSWCL VTQLSHERAS
BACU020117/1-523 TMPVEAKCIN AVSFRDRIYV VGK------- ---------- ----------
ENSTTRP00000012988/1-521 TMPVEAKCIN AVSFRDRIYV V--------- ---------- ----------
551 600
bmy_12629T0/1-485 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG
ENSP00000341342/1-621 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG
ENSBTAP00000052629/1-621 CGIAPCNNRL YITGGRDEKN EVIATVLCWD PEAQKLTEEC VLPRGVSHHG
BACU020117/1-523 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012988/1-521 ---------- ---------- ---------- ---------- ----------
601 650
bmy_12629T0/1-485 SVTIRKSYTH IRRIVPGAVS V
ENSP00000341342/1-621 SVTIRKSYTH IRRIVPGAVS V
ENSBTAP00000052629/1-621 SVTIRKSYTH IRRIVPGAVS V
BACU020117/1-523 ---------- ---------- -
ENSTTRP00000012988/1-521 ---------- ---------- -