KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:52 2014 Check: 00 .. Name: ENSP00000321976/1-832 Len: 859 Check: 458 Weight: 1.00 Name: ENSBTAP00000052685/1-828 Len: 859 Check: 31 Weight: 1.00 Name: ENSTTRP00000014447/1-600 Len: 859 Check: 4734 Weight: 1.00 Name: bmy_15587T0/1-639 Len: 859 Check: 6994 Weight: 1.00 Name: BACU002102/1-837 Len: 859 Check: 2341 Weight: 1.00 // 1 50 ENSP00000321976/1-832 MHKHYKVHFA KDA---QSPN GHYFWDPELG HRKGCCHQWR QDSAALRAHG ENSBTAP00000052685/1-828 MHQHYTVHFA KGALPPRIAT ERYFLDPELG HRKGRCHQRC HDPAAPGAHR ENSTTRP00000014447/1-600 ---------- ---------- ---------- ---------- ---------- bmy_15587T0/1-639 MNEQYTIHFA KGALPPRNPA KHYFLDRELG HQK------- ---------- BACU002102/1-837 MADAVLFEF- ---LHTEMVA ELWAQDPDPG PGGQKVSLSV LEGMGFRVGQ 51 100 ENSP00000321976/1-832 PCRPSPQSHW QLAYHSHQVG GSGWRRGLLP SVLQQQRQ-P QSQPSPPSPL ENSBTAP00000052685/1-828 SCQPTPQACR QPAYHDHQGG RGGCRRGPQP PTQQQQQQRR QPQPPPPQPL ENSTTRP00000014447/1-600 ---------- ---------- ---------- ---------- ---------- bmy_15587T0/1-639 ---------- ---------- ---------- ---------- ---------- BACU002102/1-837 ALGERLPRET LAFREELDVL KFLCKDVWAA VFQKQMDSLR TNHQGTYVLQ 101 150 ENSP00000321976/1-832 RQRLCPIHEA QKGLPATSTV PK-------- ---EPASAPQ APTLPTTAPA ENSBTAP00000052685/1-828 QQRLCSVHGV QKGPPATTTA PA-------- ---QPATAPQ PPPNSLTATS ENSTTRP00000014447/1-600 ---------- ---------- ---------- ---------- ---------- bmy_15587T0/1-639 ---------- ---------- ---------- ---------- ---------- BACU002102/1-837 DNSFPLLIRM ASGLQYLEEA PKFLAFTCGL LRGTLSTLGI KSLVTASVAA 151 200 ENSP00000321976/1-832 -MARSGPALP SAAGVLLKPS EPTDARPLPA PAACGSFTAY SSDILTEDDV ENSBTAP00000052685/1-828 TLATGGPALP YAAGTLLEPS RPTDARPLPA PAACGCFTSY SSDILTEDDV ENSTTRP00000014447/1-600 ---------- ---------- ---------- ---------- ---------- bmy_15587T0/1-639 ---------- ---------- ---------- ---------- --DILTEDDV BACU002102/1-837 LPASGTPAAM SQHYTIHFAK GALPPRNPAK HYFLDRELGH QKGILTEDDV 201 250 ENSP00000321976/1-832 YCSCLAKTLC HVPVPVTVGF YAPFGCRLHM MLDKITALMQ QEAAQRESEE ENSBTAP00000052685/1-828 YCSCLAKTLC HVPVPVTVGF YAPFGCRLHM MLDKITALMQ QEAAQREAEE ENSTTRP00000014447/1-600 ---------- ---------- ---------- --------MQ QEATQREAEE bmy_15587T0/1-639 YCSCLAKTLC HVPVPVTVGF YAPFGCRLHM MLDKIMVLMQ QEATQCEAKE BACU002102/1-837 YCSCLAKTLC HVPVPVTVGF YAPFGCRLHM MLDKIMVLMQ QEATQCEAKE 251 300 ENSP00000321976/1-832 LQHVQWRPRA VSGWGVPQLL WYLVFLQPII TEVHLRRRNV QFLFIRFSAW ENSBTAP00000052685/1-828 LEHVQWRPRP VQGWAFPKLL WYLVFLRPII TEVHLRRKNV KFLFIRFSAW ENSTTRP00000014447/1-600 LRHVQWQLRP VRGWGFSKLL WYLVFLQPII TELHLRRKNV KFLFIRFSAW bmy_15587T0/1-639 LQHVQWQPRP VQGWGFSKLL WYLVFLQPII TEVHLRRKNV KFLFIRFSAW BACU002102/1-837 LQHVQWQPRP VQGWGFSKLL WYLVFLQPII TEVHLRRKNV KFLFIRFSAW 301 350 ENSP00000321976/1-832 QYAGTDKLWA GLVTTLCEGI RRHYGALPFS VYSVLGNKPA TRQDCCQSEW ENSBTAP00000052685/1-828 QYAGTDKLWA GLVTTLCEGI RHQYGALPFS VYSVLGTKAA TTQGFRQREW ENSTTRP00000014447/1-600 QYAGSDKLWA GLVATLCEGI RQQYGALPFS LYSVLGKKAA TRLDYRHREW bmy_15587T0/1-639 QYAGTDKLWA GLVTTLCEGI RQQYGALPFS LYSVLGKKAA TRPGCRQREW BACU002102/1-837 QYAGTDKLWA GLVTTLCEGI RQQYGALSFS LYSVLGKKAA TRPGCRQREW 351 400 ENSP00000321976/1-832 HCRRRVCLGL LALLAALGLG VGLLYLSLGG HALGHGSPSG SLLKVFGGAA ENSBTAP00000052685/1-828 QCRHRVCLAL LALLAVLSLG VGLLYLSVGA RSLSHRATNS SLLRVFGGAA ENSTTRP00000014447/1-600 HCRSRVCLAM LGLLAAFSLG MSLLYLSMSS HVLGH----G NMFRAFGGAA bmy_15587T0/1-639 HCRHQLCLTL LALLAALSLG MSLLYVSMGS HTLSH----S NLFRAFGGVA BACU002102/1-837 HCRRQLCLTL LALLAALSLG MSLLYLSMGS HALSH----G NLFRAFGGAA 401 450 ENSP00000321976/1-832 TTLSGSGLLM AVYSVGKHLF VSQRKKIERL VSREKFGSQL GFMCEVKKEV ENSBTAP00000052685/1-828 TTLSGSGLLM AVYSVGKHLF VSQRKKIERL VSREKFGSQL GFMCEVKKEV ENSTTRP00000014447/1-600 TTLSSSGLLM ALFSLGKHLF VSQRKRIERL VSQERFSSHL GFMCEVKKEV bmy_15587T0/1-639 TTLSSSGLLM AMYSVGKHLF VSQRKRIERL VLREKFGSHL GFMCEVKKEV BACU002102/1-837 TTLSSSGLLM AMYSVGKHLF VSQRKRIERL VLREKFGSHL GFMCEVKKEV 451 500 ENSP00000321976/1-832 ELLTDFLCFL EIYQRRRLRV VLEVTGLDTC YPERVVGVLN AINTLLSDSH ENSBTAP00000052685/1-828 ELLTDFLCFL EIYQRRRLRV VLEVTGLDTC YPERVVGVLN AINTLLSDSH ENSTTRP00000014447/1-600 GLLTDFLCFL EIYQRRRLRV VLEITGLDTC YPERVVGVLN AINTLLSDSH bmy_15587T0/1-639 ELLTDFLCFL EIYQRRRLRV VLEITGLDTC YPERVVGVLN AINTLLSDSH BACU002102/1-837 RLLTDFLCFL EIYQRRRLRV VLEITGLDTC YPERVVGVLN AINTLLSDSH 501 550 ENSP00000321976/1-832 APFIFILVVD PSILAACLES AGNMKGTADN GYLFLNRTVT LPFSVPIMGR ENSBTAP00000052685/1-828 APFIFILVVD PSILAACLES AGSMKGTADN GYLFLNRTVT LPFSVPIMGR ENSTTRP00000014447/1-600 APFIFILVVD PSILAACLES AGSMKGTADN GYLFLNRTVT LPFSVPIMGR bmy_15587T0/1-639 APFIFILVVD PSILASCLES ACSMKGTADN GYLFLNRTVT LPFSVPIMGR BACU002102/1-837 APFIFILVVD PSILASCLES ACSMKGTADN GYLFLNRTIT LPFSVPIMGH 551 600 ENSP00000321976/1-832 RTKLQFLHDA VQSRDDLLYR EMTRKPWLPG DAGGE----- --SAQLLAVQ ENSBTAP00000052685/1-828 RTKLQFLHDA VQSRDDLLYR EMTRKLRPLG GAGAR----G GEGAQLLEVQ ENSTTRP00000014447/1-600 RTKLQFLHDA VRRRDDLLYR EMTLNVRSRG GTGGG----- --VAPLLEME bmy_15587T0/1-639 RSKLQFLHDA ---------- ---------- ---------- ----PLLEME BACU002102/1-837 RTKLQFLHDA VRSRDDLLYR EMTRNVRSRG GDGGGDGDGG GDVEPLLEME 601 650 ENSP00000321976/1-832 AQAGTERGQG RIDDEAARRI QEALFCLHDE RDCLYEYVPD NVVSMRRIVN ENSBTAP00000052685/1-828 TQAGGEREQS RIDAEAARRI REALFCLHDE RDCLYEYVPD NVVSMRRIVN ENSTTRP00000014447/1-600 GPARAESAQS LLEVKAARSI QEALCCLHDE YDCLIDYVPD NVVSMRRIVN bmy_15587T0/1-639 EQARADSAQS LLEVQAARSI QEALFCLHDE GDCLFEYVPD NVVSMRRIVN BACU002102/1-837 EQARAESAQS VLEVQAARSI QEALCCLHDE GDCLFEYVPD NVVSMRRIVN 651 700 ENSP00000321976/1-832 TVPITVRLLQ QQQQQGDFGG PTPRQAVAWV VLANQWPCRL SWALQCLEDR ENSBTAP00000052685/1-828 TVPITVRLL- -QQQQGDFGG PSPRQAVAWV VLANQWPCRL SWALQCLEDR ENSTTRP00000014447/1-600 TVPITVRLL- -QRQQGDFEG LSPRQAVAWV VLANQWPCRL SWALQCLEDQ bmy_15587T0/1-639 TVPITVRLL- -QQQQGGFGG LSPRQAVAWV VLANQWPCRL SWVLQCLEDR BACU002102/1-837 TVPITVRLL- -QQQQGDFGG LSPRQAVAWV VLANQWPCRL SWVLQCLEDR 701 750 ENSP00000321976/1-832 QQTGGAPEGR ARLWDVFRDN SRELHTMTKA LQNVLDLDGD PELFERFLGA ENSBTAP00000052685/1-828 QQAGGAPEAR ARLWDVFSDH SRELHTMTKP LQNVLDLDGD PELFERFLGA ENSTTRP00000014447/1-600 QQAGSAPEAY APLWDVFCDH SLELHTLTAT LQKVLDLDGD PELFRRFLGA bmy_15587T0/1-639 QQAGGAPETC ARLWDAFCDH SLELHTMTET LQKVLDLDGD PELFQRFLDA BACU002102/1-837 QQAGGAPEAC ARLWDVFCDH SLELHTMNET LQKVLDLDGD PELFQRFLGA 751 800 ENSP00000321976/1-832 DFPFTVAEAQ SLLRCTVNLD HSIRRRMGLI RAVSALKPPS PPKSPTRDTP ENSBTAP00000052685/1-828 DFPFTVAEAQ SLLRCTVNLD HSIRRRMGLI RAVSALKPPS PPKSPARDSP ENSTTRP00000014447/1-600 DFPFTVAEAQ SLLRCTVNLD HSIRHRMGLI RAVSTLKTPR PPESPARKDP bmy_15587T0/1-639 DFAFTVAEAQ SLLRCTVNLD HSIRHRMGLI RAVSTLKPPR PPKSPAAKPR BACU002102/1-837 DFPFTVAEAQ RLLRCTVNLD HSIRRRMGLI RAVSTLKSPR PPKSPARKAP 801 850 ENSP00000321976/1-832 HAAHRANSAS RAP----PSG RASGQAGEGH HTGDLAHRGK LWPVACALFR ENSBTAP00000052685/1-828 HAANGANHAP GPARAGHPAG HSPVHASEAH HPRDWAQGVK PRPMA----- ENSTTRP00000014447/1-600 HAASGANHAP GAA----WAG QAPARVCEAH QPQD---GGK SRPMAVP-FT bmy_15587T0/1-639 TPPAEPTTPP GRP----GQA KLLRMPAKPT NPPD---GGE SRPMA----- BACU002102/1-837 HTASGANHAP GAA----WAG QAPAHACEAH QPPG---RGQ VQTHGLSALH 851 900 ENSP00000321976/1-832 PGQSSPGGP ENSBTAP00000052685/1-828 --------- ENSTTRP00000014447/1-600 WGQSSPGGP bmy_15587T0/1-639 --------- BACU002102/1-837 LGSV-----