KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:53 2014 Check: 00 .. Name: ENSP00000258400/1-481 Len: 550 Check: 2553 Weight: 1.00 Name: ENSBTAP00000052700/1-474 Len: 550 Check: 6930 Weight: 1.00 Name: ENSTTRP00000015255/1-479 Len: 550 Check: 8137 Weight: 1.00 Name: bmy_04902T0/1-548 Len: 550 Check: 6175 Weight: 1.00 Name: BACU020406/1-479 Len: 550 Check: 9193 Weight: 1.00 // 1 50 ENSP00000258400/1-481 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052700/1-474 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015255/1-479 ---------- ---------- ---------- ---------- ---------- bmy_04902T0/1-548 MLGRVKSKRE NTKHSGLTYR HGQMKESTLA LSFWHGYKGL KTQMTSLATD BACU020406/1-479 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000258400/1-481 ---------- ------MALS YRVSELQSTI PEHILQSTFV HVISSNWSGL ENSBTAP00000052700/1-474 ---------- ---------- --IFE-QRTS PGHVLLSSFD HLISSNWSGL ENSTTRP00000015255/1-479 ---------- ------MALS YRIFE-RRTI PEHILQSSFD HLISSNWSGL bmy_04902T0/1-548 HADHCLELDL IKEKQRMALS YRIFE-QRTI PEHILQSSFD HLISSNWSGL BACU020406/1-479 ---------- ------MALS YRIFE-QRTI PEHILQSSFD HLISSNWSGL 101 150 ENSP00000258400/1-481 QTESIPEEMK QIVEEQGNKL HWAALLILMV IIPTIGGNTL VILAVSLEKK ENSBTAP00000052700/1-474 QTESITEKMK QTGEEQGNKP RWAALLILMV IIPTIGGNIL VILAVSLEKK ENSTTRP00000015255/1-479 QTESIPDEMK QIVEEQGNKL HWAALLILMV IIPTIGGNIL VILAVALEKK bmy_04902T0/1-548 QTESIPDEMK QIVEEQGNKL RWAALLILMV IIPTIGGNIL VILAVALEKK BACU020406/1-479 QTESIPDEMK QIVEEQGNKL RWAALLILMV IIPTIGGNIL VILAVALEKK 151 200 ENSP00000258400/1-481 LQYATNYFLM SLAVADLLVG LFVMPIALLT IMFEAMWPLP LVLCPAWLFL ENSBTAP00000052700/1-474 LQYATNYFLM SLAVADLLVG LFVMPIALLT IMFEAMWPLP LVLCPAWLFL ENSTTRP00000015255/1-479 LQYATNYFLM SLAVADLLVG LFVMPIALLT IMFEAMWPLP LVLCPAWLFL bmy_04902T0/1-548 LQYATNYFLM SLAVADLLVG LFVMPIALLT IMFEAMWPLP LVLCPAWLFL BACU020406/1-479 LQYATNYFLM SLAVADLLVG LFVMPIALLT IMFEAMWPLP LVLCPAWLFL 201 250 ENSP00000258400/1-481 DVLFSTASIM HLCAISVDRY IAIKKPIQAN QYNSRATAFI KITVVWLISI ENSBTAP00000052700/1-474 DVLFSTASIL HLCAISVDRY IAIKKPIQAN QYNSRATAFI KIIVVWLISI ENSTTRP00000015255/1-479 DVLFSTASIM HLCAISVDRY IAIKKPIQAN QYNSRATAFI KITVVWLISI bmy_04902T0/1-548 DVLFSTASIM HLCAISVDRY IAIKKPIQAN QYNSRATAFI KITVVWLISI BACU020406/1-479 DVLFSTASIM HLCAISVDRY IAIKKPIQAN QYNSPATAFI KITVVWLISI 251 300 ENSP00000258400/1-481 GIAIPVPIKG IETDVDNPNN ITCVLTKERF GDFMLFGSLA AFFTPLAIMI ENSBTAP00000052700/1-474 GIALPVPIKG IETDVANPNN ITCGLTKDRF GSFMLFGSLA SFFTPLAIMI ENSTTRP00000015255/1-479 GIAIPIPIKG IDTDVGNPNN ITCGLTKDRF GNFMLFGSLA SFFTPLAIMI bmy_04902T0/1-548 GIAVPVPIKG IDTDVGNPNN ITCGLTKDRF GNFMLFGSLA SFFTPLAIMI BACU020406/1-479 GIAVPVPIKG IDTDVGNPNN ITCGLTKDRF GNFMLFGSLA SFFTPLAIMI 301 350 ENSP00000258400/1-481 VTYFLTIHAL QKKAYLVKNK PPQRLTWLTV STVFQRDETP CSSPEKVAML ENSBTAP00000052700/1-474 VTYFLTIHAL QKKAYLVKNK PPQRLTWLTV STVFQRDETP CSSPEKVAML ENSTTRP00000015255/1-479 VTYFLTIHAL QKKAYLVKNK PPQRLMWLTV STVFQRDETP CSTPEKVAML bmy_04902T0/1-548 VTYFLTIHAL QKKAYLVKNK PPQRLMWLTV STVFQRDETP CSSPEKVAML BACU020406/1-479 VTYFLTIHAL QKKAYLVKNK PPQRLMWLTV STVFQRDETP CSSPEKVAML 351 400 ENSP00000258400/1-481 DGSRKDKALP NSGDETLMRR TSTIGKKSVQ TISNEQRASK VLGIVFFLFL ENSBTAP00000052700/1-474 DGFHKDKTLP NASADILMRR MSTVGKKSVQ TISNEQRASK VLGIVFFLFL ENSTTRP00000015255/1-479 DGSHKDKTLP NASDNILMRR TSTVGKKSVH TISNEQRASK VLGIVFFLFL bmy_04902T0/1-548 DGSHKDKTLP NASDDILMRR TSTVGKKSVQ TISNEQRASK VLGIVFFLFL BACU020406/1-479 DGSHKDKTLS NASDDILMRR KSTVGKKSVQ TISNEQRASK VLGIVFFLFL 401 450 ENSP00000258400/1-481 LMWCPFFITN ITLVLCDSCN QTTLQMLLEI FVWIGYVSSG VNPLVYTLFN ENSBTAP00000052700/1-474 LMWCPFFITN VTLVLCDSCN QTTLNMLLEI FVWIGYVSSG VNPLVYTLFN ENSTTRP00000015255/1-479 LMWCPFFITN ITLALCDSCN QTTLKMLLEI FVWIGYVSSG VNPLVYTLFN bmy_04902T0/1-548 LMWCPFFITN ITLALCDSCN QTTLKMLLEI FVWIGYVSSG VNPLVYTLFN BACU020406/1-479 LMWCPFFITN ITLALCDSCN QTTLKMLLEI FVWIGYVSSG VNPLVYTLFN 451 500 ENSP00000258400/1-481 KTFRDAFGRY ITCNYRATKS VKTLRKRSSK IYFRNPMAEN SKFFKKHGIR ENSBTAP00000052700/1-474 KTFRDAFGRY LTCNYRAPTS VKALGKCSSN IYFQNPMAEN SIFFMKHGMR ENSTTRP00000015255/1-479 KTFRDAFGRY ITCNYWATKS VKTLKKCSGN VYFQNQMAEN SKYFMKHRMR bmy_04902T0/1-548 KTFRDAFGRY ITCNYQATKS VKILRKCSGN VYFQNPMAEN SKFFMKHRMR BACU020406/1-479 KTFRDAFGRY ITCNYRATKS VKTLRKCSGN VYFQNPMAEN SKFFMKHRMR 501 550 ENSP00000258400/1-481 NGINPAMYQS PMRLRSSTIQ SSSIILLDTL LLTENEGDKT EEQVSYV--- ENSBTAP00000052700/1-474 NGINPAMYQS PMRLRGSTVQ SSSIILLDTL LLTENEGDKT EEQISYV--- ENSTTRP00000015255/1-479 NGINPAMYQS PMRLRSSTIQ FSSIILLDT- LLTENEGDKT EEQISYV--- bmy_04902T0/1-548 NGINPAMYQS PMKLRSSTIQ SSSIILLDT- LLTENEGDKT EEQISYIMNI BACU020406/1-479 NGINPAMYQS PMRLRSSTIQ SSSIILLDT- LLTENEGDKT EEQISYV---