KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:53 2014 Check: 00 .. Name: ENSP00000296003/1-650 Len: 654 Check: 2550 Weight: 1.00 Name: ENSTTRP00000009246/1-650 Len: 654 Check: 3058 Weight: 1.00 Name: bmy_00452T0/1-648 Len: 654 Check: 5251 Weight: 1.00 Name: BACU015158/1-648 Len: 654 Check: 5195 Weight: 1.00 Name: ENSBTAP00000052724/1-597 Len: 654 Check: 582 Weight: 1.00 // 1 50 ENSP00000296003/1-650 MAGARAAAAA ASAGSSASSG N----QPPQE LGLGELLEEF SRTQYRAKDG ENSTTRP00000009246/1-650 KAGALP-AAA ASERSPVTSS NIGSKPVHRG XGLGELLEE- SRTQYRAKDC bmy_00452T0/1-648 MAGARA-AAA ASAGSSASSG T----PQPQE PGLGELLEEF SRTQYRAKDC BACU015158/1-648 MAGARA-AAA ASAGSSASSG T----PQPQE PGLGELLEEF SRTQYRAKDC ENSBTAP00000052724/1-597 MAGARA-AAA ASAGSSASSG S----PQPQE PGLGELLEEF SRTQYRAKDC 51 100 ENSP00000296003/1-650 SGTGGSKVER IEKRCLELFG RDYCFSVIPN TNGDICGHYP RHIVFLEYES ENSTTRP00000009246/1-650 SGTGGSKVER IEKRCLELFG RDYCYSVIQN VNGDICGHYP QHIVFLEYES bmy_00452T0/1-648 SGTGGSKVER IEKRCLELFG RDYCYSVIQN VNGDICGHYP QHIVFLEYES BACU015158/1-648 SGTGGSKVER IEKRCLELFG RDYCYSVIQN VNGDICGHYP QHIVFLEYES ENSBTAP00000052724/1-597 SGTGGSKVER IEKRCLELFG RDYCYSVIQN VNGDICGHYP QHIVFLEYES 101 150 ENSP00000296003/1-650 SEKEKDTFES TVQVSKLQDL IHRSKMARCR GRFVCPVILF KGKHICRSAT ENSTTRP00000009246/1-650 SEKEKDTFQS TVQVSKLQDL VNRSKTARCR GRFVCPVILF KGKHICRSAT bmy_00452T0/1-648 SEKEKDTFQS TVQVSKLQDL VNRSKTARCR GRFVCPVILF KGKHICRSAT BACU015158/1-648 SEKEKDTFQS TVQVSKLQDL VNRSKTARCR GRFVCPVILF KGKHICRSAT ENSBTAP00000052724/1-597 SEKEKDTFQS TVQVSKLQDL VNRSKTARCR GRFVCPVILF KGKHICRSAT 151 200 ENSP00000296003/1-650 LAGWGELYGR SGYNYFFSGG ADDAWADVED VTEEDCALRS GDTHLFDKVR ENSTTRP00000009246/1-650 LAGWGELYGR TGYNYIFSGG ADDAWADAED VTEEDCALRS SDTHLFDKVR bmy_00452T0/1-648 LAGWGELYGR TGYNYIFSGG ADDAWADAED VTEEDCALRS SDTHLFDKVR BACU015158/1-648 LAGWGELYGR TGYNYIFSGG ADDAWADAED VTEEDCALRS SDTHLFDKVR ENSBTAP00000052724/1-597 LAGWGELYGR TGYNYIFSGG ADDAWADAED LTEEDCALRS SDTHLFDKVR 201 250 ENSP00000296003/1-650 GYDIKLLRYL SVKYICDLMV ENKKVKFGMN VTSSEKVDKA QRYADFTLLS ENSTTRP00000009246/1-650 GYDIKLLRYL SVKYICDLMV ENKKVKFGMN VTSSEKVDKA QRYADFTLLS bmy_00452T0/1-648 GYDIKLLRYL SVKYICDLMV ENKKVKFGMN VTSSEKVDKA QRYADFTLLS BACU015158/1-648 GYDIKLLRYL SVKYICDLMV ENKKVKFGMN VTSSEKVDKA QRYADFTLLS ENSBTAP00000052724/1-597 GYDIKLLRYL SVKYICDLMV ENKKVKFGMN VTSSEKVDKA QRYADFTLLS 251 300 ENSP00000296003/1-650 IPYPGCEFFK EYKDRDYMAE GLIFNWKQDY VDAPLSIPDF LTHSLNIDWS ENSTTRP00000009246/1-650 IPYPGCEFFK EYKDRDYMAE GLIFNWKQDY VDAPLSIPDF LTCSLNIDWS bmy_00452T0/1-648 IPYPGCEFFK EYKDRDYMAE GLIFNWKQDY VDAPLSIPEF LTCSLNIDWS BACU015158/1-648 IPYPGCEFFK EYKDRDYMAE GLIFNWKQDY VDAPLSIPDF LTCSLNIDWS ENSBTAP00000052724/1-597 IPYPGCEFFK EYKDRDYMAE GLIFNWKQDY VDAPLSIPDF LTCSLNIDWS 301 350 ENSP00000296003/1-650 QYQCWDLVQQ TQNYLKLLLS LVNSDDDSGL LVHCISGWDR TPLFISLLRL ENSTTRP00000009246/1-650 QYQSWDLVQQ TQNYLKLLLS IINSDDDSGL LVHCISGWDR TPLFISLLRL bmy_00452T0/1-648 QYQSWDLVQQ TQNYLKLLLS IINSDDDSGL LVHCISGWDR TPLFISLLRL BACU015158/1-648 QYQSWDLVQQ TQNYLKLLLS IINSDDDSGL LVHCISGWDR TPLFISLLRL ENSBTAP00000052724/1-597 QYQSWDLVQQ TQNYLKLLLS IINNDDDSGL LVHCISGWDR TPLFISLLRL 351 400 ENSP00000296003/1-650 SLWADGLIHT SLKPTEILYL TVAYDWFLFG HMLVDRLSKG EEIFFFCFNF ENSTTRP00000009246/1-650 SLWADGLIHA SLKPAEILYL TVAYDWFLFG HMLVDRLSKG EEIFFFCFNF bmy_00452T0/1-648 SLWADGLIHA SLKPAEILYL TVAYDWFLFG HMLVDRLSKG EEIFFFCFNF BACU015158/1-648 SLWADGLIHA SLKPAEILYL TVAYDWFLFG HMLVDRLSKG EEIFFFCFNF ENSBTAP00000052724/1-597 SLWADGLIHT SLKPAEILYL TVAYDWFLFG HMLVDRLSKG EEIFFFCFNF 401 450 ENSP00000296003/1-650 LKHITSEEFS ALKTQRRKSL PARDGGFTLE DICMLRRKDR GSTTSLGSDF ENSTTRP00000009246/1-650 LKHIISEEFS ALKIQRRKSL PARDAGFTVE DICMLRRKDR GSTTSLGSDF bmy_00452T0/1-648 LKHIISEEFS ALKIQRRKSL PARDAGFTVE DICMLRRKDR GSTTSLGSDF BACU015158/1-648 LKHIISEEFS ALKIQRRKSL PARDAGFTVE DICMLRRKDR GSTTSLGSDF ENSBTAP00000052724/1-597 LKHIISEEFS ALKTQRRKSL PARDAGFTVE DICMLRRKDR GSTTSLGSDF 451 500 ENSP00000296003/1-650 SLVMESSPGA TGSFTYEAVE LVPAGAPTQA AWRKSHSSSP QSVLWNRPQP ENSTTRP00000009246/1-650 SLVMESSPGA AGSFTYETVE LVPAGAQTQA AWRKSHSSSP QSVLWNRPQP bmy_00452T0/1-648 SLVMESSPGA AGSFTYETVE LVPAGAQTQA AWRKSHSSSP QSVLWNRPQL BACU015158/1-648 SLVMESSPGA AGSFTYETVE LVPAGAQTQA AWRKSHSSSP QSVLWNRPQL ENSBTAP00000052724/1-597 SLVMESSPGA AGSFTYETVE LVPAGSQTQA AWRKSHSSSP QSMLWNRPQP 501 550 ENSP00000296003/1-650 SEDRLPSQQG LAEARSSSSS SSNHSDNFFR MGSSPLEVPK PRSVDHPLPG ENSTTRP00000009246/1-650 SEDRLPSHQA LVEAKSSSSS SSNHSDNFFR LGSSPLEVPK PRSVDHPLPG bmy_00452T0/1-648 SEDRLPSHQG LVEAKSSSSS SSNHSDNFFR LGSSPLEVPK PRSVDHPLPG BACU015158/1-648 SEDRLPSHQG LVEAKSSSSS SSNHSDNFFR LGSSPLEVPK PRSVDHPLPG ENSBTAP00000052724/1-597 SEDRLPPHQG LVEAKSSSSS SSNHSDNFFR MGSSPLEVPK PR-------- 551 600 ENSP00000296003/1-650 SSLSTDYGSW QMVTGCGSIQ ERAVLHTDSS LPFSFPDELP NSCLLAALSD ENSTTRP00000009246/1-650 SSLSTDFGSW QMVTGCGSIQ -RAVLHTDSS LPFSFPDELP NNCLLTALSE bmy_00452T0/1-648 SSLSTDFGSW QMVTGCGSIQ ERAALHTDSS LPFSFPDELP NNCLLTALSE BACU015158/1-648 SSLSTDFGSW QMVTGCGSIQ ERAALHTDSS LPFSFPDELP NNCLLTALSE ENSBTAP00000052724/1-597 ---------- ---------- ---------- ---------- ----LTALSE 601 650 ENSP00000296003/1-650 RETRLQEVRS AFLAAYSSTV GLRAVAPSPS GAIGGLLEQF ARGVGLRSIS ENSTTRP00000009246/1-650 RETRLQEVRS AFLAAYSSTV GLRAAAPSPS GAI-GLLEQF VRGVGLRGTS bmy_00452T0/1-648 RETRLQEVRS AFLAAYSSTV GLRAAAPSPS GAI-GLLEQF VRGVGLRGTS BACU015158/1-648 RETRLQEVRS AFLAAYSSTV GLRAAAPSPS GAI-GLLEQF VRGVGLRGTS ENSBTAP00000052724/1-597 RETRLQEVRS AFLAAYSSTV GLRAAAPSPS GAIGGLLEQF VRGVGLRGTS 651 700 ENSP00000296003/1-650 SNAL ENSTTRP00000009246/1-650 SSTL bmy_00452T0/1-648 SSTL BACU015158/1-648 SSTL ENSBTAP00000052724/1-597 SSTL