KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:54 2014 Check: 00 .. Name: ENSP00000229758/1-447 Len: 786 Check: 7349 Weight: 1.00 Name: ENSTTRP00000000374/1-448 Len: 786 Check: 5134 Weight: 1.00 Name: ENSBTAP00000052733/1-360 Len: 786 Check: 4957 Weight: 1.00 Name: bmy_17480T0/1-448 Len: 786 Check: 9367 Weight: 1.00 Name: BACU011781/1-786 Len: 786 Check: 5951 Weight: 1.00 // 1 50 ENSP00000229758/1-447 ---------- ---------- MSRRPCSCAL RPPRC----- ---------- ENSTTRP00000000374/1-448 ---------- ---------- MSRCPCSCSP RPPSG----- ---------- ENSBTAP00000052733/1-360 ---------- ---------- MSRRPCSCSL RPLSG----- ---------- bmy_17480T0/1-448 ---------- ---------- MSRCPCSCSP RPPSD----- ---------- BACU011781/1-786 MRSRFLRSAF WGFWARQAAG PARRHVSCGS LPLEELFARG GPLRTFLERQ 51 100 ENSP00000229758/1-447 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000374/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052733/1-360 ---------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU011781/1-786 VRSEVQLPVR RPELVAVAKL LNEKEQELQE TGHLLHDENE DLRKLAESEI 101 150 ENSP00000229758/1-447 -SC------- ---------- ---------- ---------- ---------- ENSTTRP00000000374/1-448 -SC------- ---------- ---------- ---------- ---------- ENSBTAP00000052733/1-360 -SC------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 -SC------- ---------- ---------- ---------- ---------- BACU011781/1-786 TSCQKEIAQL KHQIILLLVP SEETDENDLI LEVTAGVGGQ EAMLFTSEIF 151 200 ENSP00000229758/1-447 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000374/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052733/1-360 ---------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU011781/1-786 DMYQQYAAFK RWHFETLEYF PSEIGGLRHA SASIGGSEAY KHMKFEGGVH 201 250 ENSP00000229758/1-447 ---------- --SASPSAVT AAGRPRPSD- ---------- ---------- ENSTTRP00000000374/1-448 ---------- --RCSYGVLT AAGRPRSLD- ---------- ---------- ENSBTAP00000052733/1-360 ---------- --RCSYGTLT AAGRPCPSD- ---------- ---------- bmy_17480T0/1-448 ---------- --RCSYGVLT AAGRPRPSD- ---------- ---------- BACU011781/1-786 RVQRVPKTEK QGRIHTSTMT VAILPQPTEI NLVINPKDLR IDTKRASGAG 251 300 ENSP00000229758/1-447 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000374/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052733/1-360 ---------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU011781/1-786 GQHVNTTDSA VRIVHLPTGV VSECQQERSQ LKNREMAMKK LRAKLYSLRV 301 350 ENSP00000229758/1-447 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000374/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052733/1-360 ---------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU011781/1-786 EEETSKRYNA RKIQLLPTAA LRFLSLQLQR PDSRRTPSPL GRTSPTSVDL 351 400 ENSP00000229758/1-447 ---------- ---------- --SCKEESST LSVKMKCDFN CNHVHSGLKL ENSTTRP00000000374/1-448 ---------- ---------- --GCKEESST VSVKMKCDFN YNHVHSGIKP ENSBTAP00000052733/1-360 ---------- ---------- --GCKEESST LSVKMKCDFN YNHVHSGIKP bmy_17480T0/1-448 ---------- ---------- --GCKEESST VSVKMKCDFN YNHVHSGIKP BACU011781/1-786 TLLKRSQIYP VIFISAAAIL VSGCKEESST VSVKMKCDFN YNHVHSGIKP 401 450 ENSP00000229758/1-447 VKPDDIGRLV SYTPAYLEGS CKDCIKDYER LSCIGSPIVS PRIVQLETES ENSTTRP00000000374/1-448 VKPDDSRRQG SDTTANLEGS YKDFIKDYER LSDIGSPIVS PRIVELETES ENSBTAP00000052733/1-360 VKPDDSRRKG SYTTAYLEGS YKDCIKDYDR VSDVGSPVVS PRIVELEPES bmy_17480T0/1-448 XKPDDSRRQG SYTTANLEGS YKDFIKDYER LSDIGSPIVS PRIVELETES BACU011781/1-786 VKPDDNRRQG SYTTANLEGS YKDFIKDYER LSDIGSPIVS PRIVELETES 451 500 ENSP00000229758/1-447 KRLHNKENQH VQQTLNSTNE IEALETSRLY EDSGYSSFSL QSGLSEHEEG ENSTTRP00000000374/1-448 KPLHNKENLH VQQTLNSSND IEELETSGPY EDSGYSSFSQ QSGLNEHEDS ENSBTAP00000052733/1-360 KPLHNKENQH IQQTLDSSNN IQELETSGCY EDSGYSSFSQ RSGLSEHEDS bmy_17480T0/1-448 KPLHNKENLH VQQTLNSSND IEELETSGPY EDSGYSSFSQ QSGLSEHEDS BACU011781/1-786 KPLHNKENLH VQQTLNSSND IEELETGGPY EDSGYSSFSQ QSGLSEHEDS 501 550 ENSP00000229758/1-447 SL-LEENFGD SLQSCLLQIQ SPDQYPNKNL LPVLHFEKVV CSTLKKNAKR ENSTTRP00000000374/1-448 SLPLVENFSD SPQSCLLRTQ SPDQYPNKNL LPALHFEKVV CSTLKKNCKR ENSBTAP00000052733/1-360 SLALVESFND SPQCCLLQTQ SPDQYPNKNL LPALHFEKVV CSTLKKNCKR bmy_17480T0/1-448 SLPLVENFSD SPQSCLLRTQ SPDQYPNKNL LPALHFEKVV CSTLKKNCKR BACU011781/1-786 SLPLVENFSD SPQSCLLRTQ SPDQYPNKNL LPALHFEKVV CSTLKKNCKR 551 600 ENSP00000229758/1-447 NPKVDREMLK EIIARGNFRL QNIIGRKMGL ECVDILSELF RRGLRHVLAT ENSTTRP00000000374/1-448 NPKIDWEKLK EFISSGNFRL QNIIGRKMGL DCVDILSELF RRGLKHLLGN ENSBTAP00000052733/1-360 NPKIDWEKLK EFISSGNFRL QNIIGRKMGL ECVDILSELF RRGLKHLLAN bmy_17480T0/1-448 NPKIDWEKLK EFISSGNFRL QNIIGRKMGL DCVDILSELF RRGLRHLLAN BACU011781/1-786 NPKIDWEKLK EFISSGNFRL QNIIGRKMGL DCVDILSELF RRGLRHLLAN 601 650 ENSP00000229758/1-447 ILAQLSDMDL INVSKVSTTW KKILEDDKGA FQLYSKAIQR VTENNNKFSP ENSTTRP00000000374/1-448 ILTQLSDMDL INVSKVSTTW KKILEDDKGA LQLYNNAIQR ITEKNIKFSP ENSBTAP00000052733/1-360 ILTQLSEMDL INVSKVSTTW KKILEDDKVA LQLYNKAIQR IT-------- bmy_17480T0/1-448 ILTQLSDMDL INVSKVSTTW KKILEDDKGA LQLYNKAIQR ITEKNVKFSP BACU011781/1-786 ILTQLSDMDL INVSKVSTTW KKILEDDKGA LQLYNKAIQR ITEKNIKFSP 651 700 ENSP00000229758/1-447 HASTREYVMF RTPLASVQKS AAQTSLKKDA QTKLSNQGDQ KGSTYSRHNE ENSTTRP00000000374/1-448 HASTRDYVLF RTPLVSVQKS ATQTLPKKEA RTKLPDPGDQ KGSTYSRHSE ENSBTAP00000052733/1-360 ---------- ---------- ---------- ---------- ---------- bmy_17480T0/1-448 HASTREYVLF RTPLVSVQKS ATQTLPKKDA RTKLPDPGDQ KGSTYSRHSE BACU011781/1-786 HASTREYVLF RTPLVSVQKS ATQTLPKKDA RTKLPDPGDQ KGSTYSRHSE 701 750 ENSP00000229758/1-447 FSEVAKTLKK NESLKACIRC NSPAKYDCYL QRATCKREGC GFDYCTKCLC ENSTTRP00000000374/1-448 FSEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXRCLC ENSBTAP00000052733/1-360 ---VAKTLKK NESLKACIRC NSPAKYDCYL QRATCKRESC GFDYCTKCLC bmy_17480T0/1-448 FSEVXRTLKK NESLKACIRC NSPAKYDCYL QRATCKREGC GFDYCTRCLC BACU011781/1-786 FSEVARTLKK NESLKACIRC NSPAKYDCYL QRATCKREGC GFDYCTRCLC 751 800 ENSP00000229758/1-447 NYHTTKDCSD GKLLKASCKI GPLPGTKKSK KNLRRL ENSTTRP00000000374/1-448 NYHTTEDCSN GKPLKASYKM GPLPGTKKSK KNLRRL ENSBTAP00000052733/1-360 TYHTTEDCS- ---------- ---------- ------ bmy_17480T0/1-448 NYHTTEDCSN GKPLKASYKM GPLPGTKKSK KNLRRL BACU011781/1-786 NYHTTEDCSN GKPLKASFKM GPLPGTKKSK KNLRRL