KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:55 2014 Check: 00 .. Name: ENSP00000265000/1-657 Len: 657 Check: 5706 Weight: 1.00 Name: ENSBTAP00000052823/1-652 Len: 657 Check: 2115 Weight: 1.00 Name: ENSTTRP00000014821/1-657 Len: 657 Check: 6878 Weight: 1.00 Name: bmy_17171T0/1-469 Len: 657 Check: 8982 Weight: 1.00 Name: BACU015231/1-408 Len: 657 Check: 1521 Weight: 1.00 // 1 50 ENSP00000265000/1-657 MRLKIGFILR SLLVVGSFLG LVVLWSSLTP RPDDPSPLSR MREDRDVNDP ENSBTAP00000052823/1-652 -QLGPGCGLR ALLALVS--- -VVRACFIVL NSAELSQSRN TEEDRAVNNP ENSTTRP00000014821/1-657 MRLKIQLLLC SLLVVGSFLG LEVLWYFLSL WLDKPSPLSR MREDRAVNNP bmy_17171T0/1-469 ---MMKYSFC ---------- ---------- ---------- ---------- BACU015231/1-408 ---MMKCSFC ---------- ---------- ---------- ---------- 51 100 ENSP00000265000/1-657 MPNRGGNGLA PGEDRFKPVV PWPHVEGVEV DLESIRRINK AKNEQEHHAG ENSBTAP00000052823/1-652 MPDRAGNGLA LGDDRFKPVV PWPHVEGVEV DLESIRRRNK ARHEQERRPG ENSTTRP00000014821/1-657 MPDRGGNGLA PGDDRFKPVV PWPHVEGVEV DLESIRRKNK AKHEQERHAG bmy_17171T0/1-469 ---------- ---------- ---------- ---------- ---------- BACU015231/1-408 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000265000/1-657 GDSQKDIMQR QYLTFKPQTF TYHDPVLRPG ILGNFEPKEP EPPGVVGGPG ENSBTAP00000052823/1-652 GENQKDIMRR QYLTFKPQTF TYRDPVLRPG VLGNFEPKEP EPPGVVGGPG ENSTTRP00000014821/1-657 GDNQKDIMQR QYLTFKPQTF TYRDPVLRPG VLGNFEPKEP EPHGVVGGPG bmy_17171T0/1-469 ---------- ---------- ---------- ---------- ---------- BACU015231/1-408 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000265000/1-657 EKAKPLVLGP EFKQAIQASI KEFGFNMVAS DMISLDRSVN DLRQEECKYW ENSBTAP00000052823/1-652 EKAKPLVLGP EFKHAVQASI KEFGFNMVAS DMISLDRSVN DLRQEECKYW ENSTTRP00000014821/1-657 EKAKPLVLGP EFKHAVQASI KEFGFNMVAS DMISLDRSVS DLRQEECKYW bmy_17171T0/1-469 ---------- ---------- ---------- ---------- -----RCKYW BACU015231/1-408 ---------- ---------- ---------- ---------- -----RCKYW 201 250 ENSP00000265000/1-657 HYDENLLTSS VVIVFHNEGW STLMRTVHSV IKRTPRKYLA EIVLIDDFSN ENSBTAP00000052823/1-652 HYDENLLTAS IIIVFHNEGW STLMRTVHSV IKRTPRKYLA EIVLIDDFSN ENSTTRP00000014821/1-657 HYDENLLTAS IVIVFHNEGW STLMRTVHSV IKRTPRKYLA EIVLIDDFSN bmy_17171T0/1-469 HYDENLLTAS IVIVFHNEGW STLMRTIHSV IKRTPRKYLA EIVLIDDFSN BACU015231/1-408 HYDENLLTAS IVIVFHNEGW STLMRTVHSV IKRTPRKYLA EIVLIDDFSS 251 300 ENSP00000265000/1-657 KEHLKEKLDE YIKLWNGLVK VFRNERREGL IQARSIGAQK AKLGQVLIYL ENSBTAP00000052823/1-652 KEHLKEKLDD YIKLWNGLVK VFRNERREGL IQARSIGAQK AKLGQVLIYL ENSTTRP00000014821/1-657 KEHLKEKLDD YIKLWNGLVK VFRNERREGL IQARSIGAQK AKLGQVLIYL bmy_17171T0/1-469 KEHLKEKLDD YIKLWNGLVK VFRNERREGL IQARSIGAQK AKLGQVLIYL BACU015231/1-408 KEHLKEKLDD YIKLWNGLVK VFRNERREGL IQARSIGAQK AKLGQVLIYL 301 350 ENSP00000265000/1-657 DAHCEVAVNW YAPLVAPISK DRTICTVPLI DVINGNTYEI IPQGGGDEDG ENSBTAP00000052823/1-652 DAHCEVAVNW YAPLVAPISK DRTICTVPLI DVINGNTYEI VPQGGGDEDG ENSTTRP00000014821/1-657 DAHCEVAVNW YAPLVAPISK DRTTCTVPII DVINGNTYEI VPQGGGDEDG bmy_17171T0/1-469 DAHCEVAVNW YTPLVAPISK DRTTCTVPLI DYIDGNDYSI EPQQGGDEDG BACU015231/1-408 DAHCEVAVNW YAPLVAPISK D--------- ---------- ---------- 351 400 ENSP00000265000/1-657 YARGAWDWSM LWKRVPLTPQ EKRLRKTKTE PYRSPAMAGG LFAIEREFFF ENSBTAP00000052823/1-652 YARGAWDWSM LWKRVPLTLR EKRLRKTKTE PYRSPAMAGG LFAIERDFFF ENSTTRP00000014821/1-657 YARGAWDWSM LWKRVPLTPQ EKRMRKTKTE PYRSPAMAGG LFAIERDFFF bmy_17171T0/1-469 FARGAWDWSL LWKRIPLSHK EKAKRKHKTE PYRSPAMAGG LFAIERDFFF BACU015231/1-408 ---------- ---------- ---------- --RSPAMAGG LFAIERDFFF 401 450 ENSP00000265000/1-657 ELGLYDPGLQ IWGGENFEIS YKIWQCGGKL LFVPCSRVGH IYRLEGWQGN ENSBTAP00000052823/1-652 ELGLYDPGLQ IWGGENFEIS YKIWQCGGKL LFVPCSRVGH IYRLEGWQGN ENSTTRP00000014821/1-657 ELGLYDPGLQ IWGGENFEIS YKIWQCGGKL LFVPCSRVGH IYRLEGWQGN bmy_17171T0/1-469 ELGLYDPGLQ IWGGENFEIS YKIWQCGGKL LFVPCSRVGH IYRLEGWQGN BACU015231/1-408 ELGLYDPGLQ IWGGENFEIS YKIWQCGGKL LFVPCSRVGH IYRLEGWQGN 451 500 ENSP00000265000/1-657 PPPIYVGSSP TLKNYVRVVE VWWDEYKDYF YASRPESQAL PYGDISELKK ENSBTAP00000052823/1-652 PPPVYVGSSP TLKNYVRVVE VWWDEYKDYF YASRPESKAL AYGDISELKK ENSTTRP00000014821/1-657 PPPVYVGSSP TLKNYVRVVE VWWDEYKDYF YASRPESKAL PYGDISELKK bmy_17171T0/1-469 PPPVYVGSSP TLKNYVRVVE VWWDEYKDYF YASRPESKAL PYGDISELKK BACU015231/1-408 PPPVYVGSSP TLKNYVRVVE VWWDEYKDYF YASRPESKAL PYGDISELKK 501 550 ENSP00000265000/1-657 FREDHNCKSF KWFMEEIAYD ITSHYPLPPK NVDWGEIRGF ETAYCIDSMG ENSBTAP00000052823/1-652 FREDHNCKSF KWFMEEIAYD ITSHYPLPPK NVDWGEIRGF ETVYCIDSMG ENSTTRP00000014821/1-657 FREDHNCKSF KWFMEEIAYD ITSHYPLPPK NVDWGEIRGF ETVYCIDSMG bmy_17171T0/1-469 FREDHNCKSF KWFMEEIAYD ITSHYPLPPR NVEWGEIRGF ETVYCIDSMG BACU015231/1-408 FREDHNCKSF KWFMEEIAYD ITSHYPLPPK NVEWGEIRGF ETVYCIDSMG 551 600 ENSP00000265000/1-657 KTNGGFVELG PCHRMGGNQL FRINEANQLM QYDQCLTKGA DGSKVMITHC ENSBTAP00000052823/1-652 KTNGGFVELG PCHRMGGNQL FRINEANQLM QYDQCLTKGP DGSKVMITHC ENSTTRP00000014821/1-657 KTNGGFVELG PCHRMGGNQL FRINEANQLM QYDQCLTKGP DGSKIMITHC bmy_17171T0/1-469 KTNGGFVELG PCHRMGGNQL FRINEANQLM QYDQCLTKGP DGSKIMITHC BACU015231/1-408 KTNGGFVELG PCHRMGGNQL FRINEANQLM QYDQCLTKGP DGSKIMITHC 601 650 ENSP00000265000/1-657 NLNEFKEWQY FKNLHRFTHI PSGKCLDRSE VLHQVFISNC DSSKTTQKWE ENSBTAP00000052823/1-652 NLNEFKEWQY FKNLHRLTHI PSGKCLDRSE VLHQVFISDC DSSKMTQKWE ENSTTRP00000014821/1-657 NLNEFKEWQY FKNLHRLTHI PSRKCLDRSE VLHQVFISDC DSSKMTQKWE bmy_17171T0/1-469 NLNEFKEWQY FKNLHRLTHI PSRKCLDRSE VLHQVFISDC DSSKMTQKWE BACU015231/1-408 NLNELKEWQY FKNLHRLTHI PSRKCLDRSE VLHQVFISDC DSSKMTQKWE 651 700 ENSP00000265000/1-657 MNNIHSV ENSBTAP00000052823/1-652 INNIHSV ENSTTRP00000014821/1-657 INNIHSV bmy_17171T0/1-469 INNIHSV BACU015231/1-408 INNIHSV