KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:55 2014 Check: 00 .. Name: bmy_05554T0/1-335 Len: 417 Check: 6430 Weight: 1.00 Name: ENSP00000299665/1-215 Len: 417 Check: 5597 Weight: 1.00 Name: ENSBTAP00000052843/1-213 Len: 417 Check: 6524 Weight: 1.00 Name: BACU020188/1-131 Len: 417 Check: 4932 Weight: 1.00 Name: ENSTTRP00000013514/1-135 Len: 417 Check: 836 Weight: 1.00 // 1 50 bmy_05554T0/1-335 -----MNNKL KKEHEVKLIL SSVKM----- ---------- ---------- ENSP00000299665/1-215 MGLEKPQSKL EGGMHPQLIP SVIAVVFILL LSVCFIASCL VTHHNFSRCK ENSBTAP00000052843/1-213 MGQEEPLNKL ERGQHSQLIP WTIAIFFMSL LSACFIANYV VTHHNFLSCK BACU020188/1-131 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013514/1-135 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05554T0/1-335 ---------- ---------- ---------- ---------- ---------- ENSP00000299665/1-215 RGTGVHKL-E HHAKLKCIKE KSELKSAEGS TWNCCPIDWR AFQSNCYFPL ENSBTAP00000052843/1-213 KGTGFFRLPK QHPKVICVRE KPELK---GG TWNCCPVGWR AFQSNCYFPF BACU020188/1-131 ---------- ---------- ---------- -WNCCLVGWR AFQSNCYFPF ENSTTRP00000013514/1-135 ---------- ---------- ---------V TWNCCLVGWR AFPSNCCF-- 101 150 bmy_05554T0/1-335 --RMKYTLEK KYKRLLRLLL LPTSEPFEEA YLIMTKILKY ELMIAVVVHI ENSP00000299665/1-215 TDNKTWAESE RNCSGMGAHL MTISTEAEQN FIIQFLDRRL SYFLGL---- ENSBTAP00000052843/1-213 NDNKTWAQSE SHCSGMGGHL ATISTGAEQN FITQFLDRRF SYFLGL---- BACU020188/1-131 NDNKTWAQSE SHCMGMGAHL ATISTEAEQN VITQFLDRRF SYFLGL---- ENSTTRP00000013514/1-135 NDSKTWAQSE RHCMGTGAHL ATISTEAEQN VITQFLD-RF SYFLGL---- 151 200 bmy_05554T0/1-335 GDGDGEEEVE ESEHDFGEEE GHQFKDFRFW HEGEPNNYQK EKCVVFVNDK ENSP00000299665/1-215 -----RDENA KGQWRWVDQT PFNPRRV-FW HKNEPDNSQG ENCVVLVYNQ ENSBTAP00000052843/1-213 -----RSENL DGQWHWVDKK PFNPQIV-FW HKREPNNDQK EKCVVLVNDK BACU020188/1-131 -----TDENL EGQWHWVDKT PFNPQMV-FW HEGEPNNYQK EKCVVFVNDK ENSTTRP00000013514/1-135 -----TDENL ESQWHWVDKT PLNPQMV-FW PEGEPNNYQK EKCVVFVNDK 201 250 bmy_05554T0/1-335 DKWAWNDFPC DFKTSRICKI PGYLQQEAWR GTEVYLLKER RENSHFMVFL ENSP00000299665/1-215 DKWAWNDVPC NFEASRICKI PG-------- ---------- ---------- ENSBTAP00000052843/1-213 DKWAWSDFPC DSKTSWICKI TG-------- ---------- ---------- BACU020188/1-131 DKWSWNDFPC DFKTSRICKI PG-------- ---------- ---------- ENSTTRP00000013514/1-135 DKWAWNDFPC DFKTSRICKI PG-------- ---------- ---------- 251 300 bmy_05554T0/1-335 IYENKRLKQS IIVDLYVFYQ SLEVHVKGKH KKARGRMSGS DTKPTKNFIV ENSP00000299665/1-215 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052843/1-213 ---------- ---------- ---------- ---------- ---------- BACU020188/1-131 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013514/1-135 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_05554T0/1-335 LVAFKAMKPG NMLQIWMVTQ FSNTIIYSGS LIQLLLFGHK IGRKRSKYST ENSP00000299665/1-215 ---------- --------TT LN-------- ---------- ---------- ENSBTAP00000052843/1-213 ---------- --------TA FN-------- ---------- ---------- BACU020188/1-131 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013514/1-135 ---------- --------AA FNK------- ---------- ---------- 351 400 bmy_05554T0/1-335 GICSDVNKLN YSHSLRPEDN GNDCVVEVVL ESFYNYIVHL FTRTYHLKRE ENSP00000299665/1-215 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052843/1-213 ---------- ---------- ---------- ---------- ---------- BACU020188/1-131 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013514/1-135 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_05554T0/1-335 RSLVLRNWEE DQHLYMN ENSP00000299665/1-215 ---------- ------- ENSBTAP00000052843/1-213 ---------- ------- BACU020188/1-131 ---------- ------- ENSTTRP00000013514/1-135 ---------- -------