KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:56 2014 Check: 00 .. Name: ENSP00000351206/1-684 Len: 839 Check: 637 Weight: 1.00 Name: ENSTTRP00000012931/1-693 Len: 839 Check: 9254 Weight: 1.00 Name: ENSBTAP00000052854/1-738 Len: 839 Check: 8739 Weight: 1.00 Name: bmy_01785T0/1-472 Len: 839 Check: 5664 Weight: 1.00 Name: BACU014350/1-700 Len: 839 Check: 9048 Weight: 1.00 // 1 50 ENSP00000351206/1-684 MEANHSEQLS AERQSTPPGD SSSLPSHNGL EKEDGQDSPT PVQPPEKEAS ENSTTRP00000012931/1-693 METNQSVQLS GEPQSTPVGD SSVLPSQNGL EKQDDQDSST PLLAPEEEAG ENSBTAP00000052854/1-738 MESNQPGQLS GEPPSTPVRD SSALSSQNGL EKQNDLDRST PLPAPEQAAG bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000351206/1-684 VHP-----DI SEELNRQLED IINTYGSAAS TAGKEGSARA SEQPENAESP ENSTTRP00000012931/1-693 VQPERGAHDI SEELNRQLED IINTYGSAVS TAGKEGPTTA KEQPENTAPP ENSBTAP00000052854/1-738 IQLERGPHDI SEELNRQLED IINTYGSTAG AAGKEGTTMV KEQPENTDPP bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000351206/1-684 DNEDGDCEET TEEAGREPVA SGEPPTVKEP VSNKEQKLEK KILKGLGKEA ENSTTRP00000012931/1-693 DNEDRACEEA AEETEREPPA SGEPPTSKEP VSNKEQKLEK KILKGLGKEA ENSBTAP00000052854/1-738 DNEDGDCEEA PEEVEREPAA TGEPSTAKEP ASNKEQKLEK KILKGLGKEA bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 ---------- ---------- ---------- ----MIRFST SILTLRGKEA 151 200 ENSP00000351206/1-684 NLLMQNLNKL QTPEEKFDFL FKKYAELLDE HRTEQKKLKL LQKKQVQIQK ENSTTRP00000012931/1-693 NLLMQNLNKL QTPEEKLDFL FKKYAELLDE HRSEQRKLKL LQKKQAQIQK ENSBTAP00000052854/1-738 NLLMQNLNKL QTPEEKFDFL FKKYAELLDE HRTEQRKLKL LQKKQAQIQK bmy_01785T0/1-472 ---MQNLNKL QTPEEKLDFL FKKYAELLDE HRTEQRKLKL LQKKQAQIXK BACU014350/1-700 NLLMQNLNKL QTPEEKLDFL FKKYAELLDE HRTEQRKLKL LQKKQAQIQK 201 250 ENSP00000351206/1-684 EKDQLQGEHS RAILARSKLE SLCRELQRHN KTLKEEALQR AREEEEKRKE ENSTTRP00000012931/1-693 EKDQLQGEHS KAILARSKLE GLCRELQRHN KTLKEETLQR AREEEEKRKE ENSBTAP00000052854/1-738 EKDQLQGEHS RAILARSKLE SLCRELQRHN KTLKEETLQR AREEEEKRKE bmy_01785T0/1-472 EKDQLQGEHS KAILARSKLE GLCRELQRHN KTLKEETLQR AREEEEKRKE BACU014350/1-700 EKDQLQGEHS KAILARSKLE GLCRELQRHN KTLKEETLQR AREEEEKRKE 251 300 ENSP00000351206/1-684 ITSHFQSTLT DIQGQIEQQS ERNMKLCQEN TELAEKLKSI IDQYELREEH ENSTTRP00000012931/1-693 ITSHFQSTLT DIQAQIEQQS ERNMKLCQEN TELAEKLKSI IDQYELREEH ENSBTAP00000052854/1-738 ITSHFQNTLT DIQAQIEQQS ERNMKLCQEN TELAEKLKSI IDQYELREEH bmy_01785T0/1-472 ITSHFQSTLA DIQAQIEQQS ERNMKLCQEN TELAEKLKSI LDQYELREEH BACU014350/1-700 ITSHFQSTLT DIQAQIEQQS ERNMKLCQEN TELAEKLKSI IDQYELREEH 301 350 ENSP00000351206/1-684 LDKIFKHREL QQKLVDAKLE QAQEMMKEAE ERHKREKEYL LNQAAEWKLQ ENSTTRP00000012931/1-693 LDKIFKHREL QQTLVDAKLE QAQEMMMEAE EQHKREKEYL LNQAAEWKLQ ENSBTAP00000052854/1-738 LDKIFKHREL QQKLVDAKLE QAQEMMKEAE ERHKREKEYL LNQAAEWKLQ bmy_01785T0/1-472 LDKIFKHREL QQKLVDAKLE QAQEMMKEAE ERHKREKEYL LNQAAEWKLQ BACU014350/1-700 LDKIFKHREL QQKLVDAKLE QAQEMMKEAE ERHKREKEYL LNQAAEWKLQ 351 400 ENSP00000351206/1-684 AKVLKEQETV LQAQLTLYSG RFEEFQSTLT KSNEVFATFK QEMDKTTKKM ENSTTRP00000012931/1-693 AKVLKEQETV LQAQLTVYSE RFEEFQSTLA KSNEVFATFK QEMEKTTKKM ENSBTAP00000052854/1-738 AKVLKEQETV LQAQLTLYSG RFEEFQSTLT KSNEVFATFK QEMDKTTKKM bmy_01785T0/1-472 AKVLKEQETV LQAQLTVYSG RFEEFQSTLT KSNEVFATFK QEMEKTTKKM BACU014350/1-700 AKVLKEQETV LQAQLTVYSG RFEEFQSTLT KSNEVFATFK QEMEKTTKKM 401 450 ENSP00000351206/1-684 KKLEKDTATW KARFENCNKA LLDMIEEKAL RAKEYECFVM KIGRLENLCR ENSTTRP00000012931/1-693 KKLEKDTATW KARFENCNKA LLDMIEEKAL RAKEYECFVM KIGRLENLCR ENSBTAP00000052854/1-738 KKLEKDTATW KARFENCNKA LLDMIEEKAL RAKEYECFVM KIGRLENLCR bmy_01785T0/1-472 KKLEKDTATW KARFENCNKA LLDMIEEKAL RAKEYECFVM KIGRLENLCR BACU014350/1-700 KKLEKDTATW KARFENCNKA LLDMIEEKAL RAKEYECFVM KIGRLENLCR 451 500 ENSP00000351206/1-684 ALQEERNELH KKIRDAEISE KDDQSQHNSD E-EPESNVSV DQEIDAEEVN ENSTTRP00000012931/1-693 ALQEERNELY KKIRETKMPE KDDQGQLTSD DDEPESNTSV GEEADAEEAN ENSBTAP00000052854/1-738 ALQEERNELY KKIREAKMPK KDDQGQHTSD D---EPNTSV NEEADAEEAN bmy_01785T0/1-472 ALQEERNELY KKIRETKMPE KDDQGQLTSD DDEPESNTSV GEEAEAEEAN BACU014350/1-700 ALQEERNELY KKIRETKMPE KDAQGQLTSD DDEPESNTSV GEEAEAEEAK 501 550 ENSP00000351206/1-684 SVQTAVKNLA TAFMIIHHPE STPHQSKETQ PEIGSSQESA DAALKEPEQP ENSTTRP00000012931/1-693 SVHNAVQNLT AAFMVIHRPE STLDASKEIQ TEVSSPHGGG -TVLKGLEQS ENSBTAP00000052854/1-738 NVHKAVQNLA AAFMIMHCPE STLDVSKEIH PEVDSPPGDC DTALRGLEQA bmy_01785T0/1-472 SVHNAVQNLA AAFMVIHRPE STLDASKEIQ TEVSSPQGGG GTALKGLEQA BACU014350/1-700 GVHNAVQNLA AAFMVIHRPE STLDASKEIQ TEVSSPQGGG GTALKGLEQA 551 600 ENSP00000351206/1-684 PLIPSRDSES PLPPLTPQAE AEGGSDAEPP SKASNSPAGL GAETQCEGLP ENSTTRP00000012931/1-693 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000052854/1-738 PLSPACHSEI PLPPPNPQAE GKRVSETEPT LR-----AET GAEAQDDGLP bmy_01785T0/1-472 PLSPACHSGS PLHPPSPQAE AEGGNEAEPP LR-----SGS GAQAQGNGPP BACU014350/1-700 PLSPACHSGS PLHPPSPQAE AEGGNEGEPP LR-----SGS GAQAQGNGPP 601 650 ENSP00000351206/1-684 VGAQADQASW KPEAEASGQA PQAPTEASLQ ---------- ---------- ENSTTRP00000012931/1-693 XXXXXXXXXR KPEAAASGQA LEPPAEAF-- ---------- ---------- ENSBTAP00000052854/1-738 GAAPADQQNR KPEAAASSQA PKAPAKPSLP VVKANEQPWK PEAA------ bmy_01785T0/1-472 AGPQADPQPR KPETAFSSRA PEPPAEAFLR ---------- ---------- BACU014350/1-700 AGPQADPQPR KPEAAFSGQA PEPPAEAFLR VMEADGQPRK PEAAFSGQAP 651 700 ENSP00000351206/1-684 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012931/1-693 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052854/1-738 ---------- ---------- ---------- ---------- ---------- bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 EPPAEAFLRV MEADGQPRKP EAAFSGQAPE PPAEAFLRVM EADGQPRKPE 701 750 ENSP00000351206/1-684 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012931/1-693 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052854/1-738 ---------- ---------- ---------- --SGQAQEPT AEASLPVMEV bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 AAFSGQAPEP PAEAFLREME ADGQPRKPEA AFSSWAPEPP AEAFLRVMEA 751 800 ENSP00000351206/1-684 ---------- ---------- -----KMEAD VPAPACAAEE HVAAMVPACE ENSTTRP00000012931/1-693 ---------- ---------- ---RWVMEAD GRAPPPAAGE HVPAGESRCE ENSBTAP00000052854/1-738 NGQSRKPEAA TSGQALEPPA ETFLCVMEAK CSAPPPAVGA HLPARESGCE bmy_01785T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU014350/1-700 DGQPRRPEAA ASGRAPEPPA EAFLWVMEAA GRAPPPAAGE HVPAGESRCE 801 850 ENSP00000351206/1-684 PSRQPP---- RAAAEELPVG ASAGPQPRNV ADTNLEGVD ENSTTRP00000012931/1-693 PRRQPPAAAA AAAAEGLPGG ASAGPPLPKV ADTNLEGVD ENSBTAP00000052854/1-738 PMTQPP---- -PTAEGLPGG ASGGPPLPKV ADTNLEGVD bmy_01785T0/1-472 ---------- ---------- ---------- --------- BACU014350/1-700 PRRQPPAAAA AAAAEGLPGG ASAGPPLPEV ADTNLEGAD