KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:02:00 2014 Check: 00 .. Name: ENSP00000246657/1-378 Len: 409 Check: 5029 Weight: 1.00 Name: ENSBTAP00000052953/1-379 Len: 409 Check: 9425 Weight: 1.00 Name: ENSTTRP00000016031/1-376 Len: 409 Check: 1988 Weight: 1.00 Name: bmy_13564T0/1-409 Len: 409 Check: 2169 Weight: 1.00 Name: BACU007039/1-316 Len: 409 Check: 2786 Weight: 1.00 // 1 50 ENSP00000246657/1-378 ---------- ----MDLGKP MKS------- ---------V LVVALLVIFQ ENSBTAP00000052953/1-379 ---------- ----MDLGKP MKN------- ---------V LVVALLVIFQ ENSTTRP00000016031/1-376 ---------- ----MDLGKP MKS------- ---------V LWTAVI---Q bmy_13564T0/1-409 MLGAVPWAAG IHKSSSHSPP MITAACPKPG LSGLFMELCL PLFSLRALLN BACU007039/1-316 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000246657/1-378 VCLCQDEVTD DYIGDNTTVD YTLFESLCSK KDVRNFKAWF LPIMYSIICF ENSBTAP00000052953/1-379 VCLCQDEVTD DYIGDNTTVD YTLYESVCFK KDVRNFKAWF LPIMYSIICF ENSTTRP00000016031/1-376 VCLCQDEVTD DYVGDNTTVD YTLYESVCFK KDVRNFKAWF LPVMYSIICF bmy_13564T0/1-409 VCLCQDEVTD DYIGDNTTVD YTLYESVCFK KDVRNFKAWF LPVMYSIICF BACU007039/1-316 ---------- ---------- ---------- ---------- ---MYSIICF 101 150 ENSP00000246657/1-378 VGLLGNGLVV LTYIYFKRLK TMTDTYLLNL AVADILFLLT LPFWAYSAAK ENSBTAP00000052953/1-379 VGLLGNGLVM LTYIYFKRLK TMTDTYLLNL ALADILFLLT LPFWAYSAAK ENSTTRP00000016031/1-376 MGLLGNGLVM LTYIYFKRLK TMTDTYLLNL AVADILFLLT LPFWAYSAAK bmy_13564T0/1-409 MGLLGNGLVM LTYIYFKRLK TMTDTYLLNL AVADILFLLT LPFWAYSAAK BACU007039/1-316 MGLLGNGLVM LTYIYFKRLK TMTDTYLLNL AVADILFLLT LPFWAYSAAK 151 200 ENSP00000246657/1-378 SWVFGVHFCK LIFAIYKMSF FSGMLLLLCI SIDRYVAIVQ AVSAHRHRAR ENSBTAP00000052953/1-379 SWVFGVHVCK LIFGIYKISF FSGMLLLLCI SIDRYVAIVQ AVSAHRHRAR ENSTTRP00000016031/1-376 SWVFGVHVCK LIFGIYKISF FSSMLLLLCI SIDRYVAIVQ AVSAHRHRAR bmy_13564T0/1-409 SWVFGVHVCK LIFGIYKISF FSGMLLLLCI SIDRYVAIVQ AVSAHRHRAR BACU007039/1-316 SWVFGVHVCK LIFGIYKISF FSGMLLLLCI SIDRYVAIVQ AVSAHRHRAR 201 250 ENSP00000246657/1-378 VLLISKLSCV GIWILATVLS IPELLYSDLQ RSSSEQAMRC SLITEHVEAF ENSBTAP00000052953/1-379 VLLISKLSCL GIWMLAIVLS TPEVMYSGIQ KSSSEQALRC SLVTEHVEAL ENSTTRP00000016031/1-376 VLLISKLSCV GIWLLAVVLS SPELLYSGIQ RSSTEQALRC SLITERVEAL bmy_13564T0/1-409 VLLISKLSCV GIWMLAVVLS TPELLYSGIQ KSSSEQALRC SLITDHVEAL BACU007039/1-316 VLLISKLSCV GIWMLAVVLS TPELLYSGIQ KSSSEQALRC SLITEHVEAL 251 300 ENSP00000246657/1-378 ITIQVAQMVI GFLVPLLAMS FCYLVIIRTL LQARNFERNK AIKVIIAVVV ENSBTAP00000052953/1-379 ITIQVAQMVV GFLIPLMAMS FCYLVIIRTL LQARNFERNK AIKVIIAVVV ENSTTRP00000016031/1-376 ITIRVAQMVV GFLIPLVAMS FCYLLIIRTL LQARNFERNK AIKVIIAVVV bmy_13564T0/1-409 ITIQVAQMVV GFLIPLVAMS FCYLLIVRTL LQARNFERNK AIKVIIAVVV BACU007039/1-316 ITIQVAQMVV GFLIPLVAMS FCYLLIVRTL LQARNFERNK AIKVIIAVVV 301 350 ENSP00000246657/1-378 VFIVFQLPYN GVVLAQTVAN FNITSST-CE LSKQLNIAYD VTYSLACVRC ENSBTAP00000052953/1-379 VFVAFQLPYN GVVLAQTVAN FNITSGTSCE LSKQLNIAYD VTYSLACVRC ENSTTRP00000016031/1-376 VFVAFQLPYN GVVLAQTVAN FNITGGTSCE LSKQLNIAYD VTYSLACIRC bmy_13564T0/1-409 VFVAFQLPYN GVVLAQTVAN FNITSSTSCE LSKKLNIAYD VTYSLACIRC BACU007039/1-316 VFVAFQLPYN GVVLAQTVAN FNITSGTSCE LSKKLNIAYD VTYSLACIRC 351 400 ENSP00000246657/1-378 CVNPFLYAFI GVKFRNDLFK LFKDLGCLSQ EQLRQWSSCR HIRRSSMSVE ENSBTAP00000052953/1-379 CVNPFLYAFI GVKFRSDLFK LFKDLGCLSQ EQLRQWSSCR HTRRSSMSVE ENSTTRP00000016031/1-376 CVNPFLYAFI GVKFRSDLFK LFKDLGCLSQ ERLRQWSACR HARRSSMSVE bmy_13564T0/1-409 CVNPFLYAFI GVKFRSDLFK LFKDLGCLSQ ERLRQWSACR HARRSSMSVE BACU007039/1-316 CVNPFLYAFI GVKFRSDLFK LFKDLGCLSQ ERLRQWSACR HARRSSMSVE 401 450 ENSP00000246657/1-378 AETTTTFSP ENSBTAP00000052953/1-379 AETTTTFSP ENSTTRP00000016031/1-376 AETTTTFSP bmy_13564T0/1-409 AETTTTFSP BACU007039/1-316 AETTTTFSP