KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:02:03 2014 Check: 00 .. Name: ENSTTRP00000009515/1-628 Len: 649 Check: 8666 Weight: 1.00 Name: ENSP00000336831/1-629 Len: 649 Check: 8201 Weight: 1.00 Name: ENSBTAP00000053019/1-630 Len: 649 Check: 8178 Weight: 1.00 Name: bmy_10666T0/1-616 Len: 649 Check: 3319 Weight: 1.00 Name: BACU012769/1-611 Len: 649 Check: 652 Weight: 1.00 // 1 50 ENSTTRP00000009515/1-628 MENSTTTISR EELEELQEAF NKIDIDNSGY VSDYELQDLF KEASLPLPGY ENSP00000336831/1-629 MENSTTTISR EELEELQEAF NKIDIDNSGY VSDYELQDLF KEASLPLPGY ENSBTAP00000053019/1-630 MENSTTTISR EELEELQEAF NKIDIDNSGY VSDYELQDLF KEASLPLPGY bmy_10666T0/1-616 MENSTTTISR EELEELQEAF NKIDIDNSGY VSDYELQDLF KEASLPLPGY BACU012769/1-611 ---------- ---------F MFLDIDNSGY VSDYELQDLF KEASLPLPGY 51 100 ENSTTRP00000009515/1-628 KVREIVEKIL AVADNNKDGK ISFEEFV--- ---------- ------SLMQ ENSP00000336831/1-629 KVREIVEKIL SVADSNKDGK ISFEEFV--- ---------- ------SLMQ ENSBTAP00000053019/1-630 KVREIVEKIL AVADNNKDSR ISFEEFV--- ---------- ------SLMQ bmy_10666T0/1-616 KVREIVEKIL AVADNNKDGK ISFEEFVSVS NLNPLLXTDC FXSSRXSLMQ BACU012769/1-611 KVREIVEKIL AVADNNKDGK ISFEEFV--- ---------- ------SLMQ 101 150 ENSTTRP00000009515/1-628 ELKSKDISKT FRKIINKREG ITAIGGTSSI SSEGTQHSYS EEEKVAFVNW ENSP00000336831/1-629 ELKSKDISKT FRKIINKREG ITAIGGTSTI SSEGTQHSYS EEEKVAFVNW ENSBTAP00000053019/1-630 ELKSKDISKT FRKIINKREG ITAIGGTSSI SSEGTQHSYS EEEKVAFVNW bmy_10666T0/1-616 ELKSKDISKT FRKIINKREG ITAIGGTSSL SSEGTQHSYS EEEKVAFVNW BACU012769/1-611 ELKSKDISKT FRKIINKREG ITAIGGTSSI SSEGTQHSYS EEEKVAFVNW 151 200 ENSTTRP00000009515/1-628 INKALENDAD CKHLIPMNPN DGSLFKSLAD GILLCKMINL SEPDTIDERA ENSP00000336831/1-629 INKALENDPD CKHLIPMNPN DDSLFKSLAD GILLCKMINL SEPDTIDERA ENSBTAP00000053019/1-630 INKALENDPD CKHLIPMNPN DDSLFKSLAD GILLCKMINL SEPDTIDERA bmy_10666T0/1-616 INKALENDAD CKHLIPMNPN DGSLFKSLAD GILLCKMINL SEPDTIDERA BACU012769/1-611 VNKALENDAD CKHLIPMNPN DGSLFKSLAD GILLCKMINL SEPDTIDERA 201 250 ENSTTRP00000009515/1-628 INKKKLTPFT ISENLNLALN SASAIGCTVV NIGAQDLKEG KPHLVLGLLW ENSP00000336831/1-629 INKKKLTPFT ISENLNLALN SASAIGCTVV NIGASDLKEG KPHLVLGLLW ENSBTAP00000053019/1-630 INKKKLTPFT ISENLNLALN SASAIGCTVV NIGAQDLTEG KPHLVLGLLW bmy_10666T0/1-616 INKKKLTPFT ISENLNLALN SASAIGCTVV NIGAQDLKEG KPHLVLGLLW BACU012769/1-611 INKKKLTPFT ISENLNLALN SASAIGCTVV NIGAQDLKEG KPHLVLGLLW 251 300 ENSTTRP00000009515/1-628 QIIKVGLFAD IEISRNEALI ALLNEREDLE ELMKLSPEEL LLRWVNYHLT ENSP00000336831/1-629 QIIKVGLFAD IEISRNEALI ALLNEGEELE ELMKLSPEEL LLRWVNYHLT ENSBTAP00000053019/1-630 QIIKVGLFAD IEISRNEALI ALLKEGEDLE ELMRLSPEEL LLQWVNYHLT bmy_10666T0/1-616 QIIKVGLFAD IEISRNEALI ALLNEGEDLE ELMKLSPEEL LLRWVNYHLT BACU012769/1-611 QIIKVGLFAD IEISRNEALI ALLNEGEDLE ELMKLSPEEL LLRWVNYHLT 301 350 ENSTTRP00000009515/1-628 NA-WRTIXXX XXXXXDSRAY FHLLNQIAPK GDRDDGPAIA IDLSGF-NRN ENSP00000336831/1-629 NAGWHTISNF SQDIKDSRAY FHLLNQIAPK GG-EDGPAIA IDLSGINETN ENSBTAP00000053019/1-630 NAGWPTISNF SHDIKDSRAY FHLLNQIAPK GDRDDGPAIA IDLTGFSEKN bmy_10666T0/1-616 NAGWRTISNF SQDIK----- ---------- ---------- -------EGN BACU012769/1-611 NAGWRTISNF SQDIKDSRAY FHLLNQIAPK GDRDDGPAIA IDFSGFNEEN 351 400 ENSTTRP00000009515/1-628 DLKRAEFMLQ EADKLGCRQF VTPADVVSGN PKLNLAFVAN LFNTYPSLHK ENSP00000336831/1-629 DLKRAGLMLQ EADKLGCKQF VTPADVVSGN PKLNLAFVAN LFNTYPCLHK ENSBTAP00000053019/1-630 DLKRAEFMLQ EADKLGCRQF VTPADVVSGN PKLNLAFVAN LFNTYPGLHK bmy_10666T0/1-616 DLKRAEFMLR EADKLGCRQF VTPADVVSGN PKLNLAFVAN LFNTYPSLQK BACU012769/1-611 DLKRAEFMLR EADKLGCRQF VTPADVVSGN PKLNLAFVAN LFNTYPSLHK 401 450 ENSTTRP00000009515/1-628 PDNNDIDMNL LEGESKEERT FRNWMNSLGV NPYINHLYSD LADALVIFQL ENSP00000336831/1-629 PNNNDIDMNL LEGESKEERT FRNWMNSLGV NPYINHLYSD LADALVIFQL ENSBTAP00000053019/1-630 PDNNDIDVNL LEGESKEERT FRNWMNSLGV NPYINHLYSD LADALVIFQL bmy_10666T0/1-616 PD-NDIDMNL LEGESKEERT FRNWMNSLGV NPYVNHLYSD LADALVIFQL BACU012769/1-611 PDNNDIDMNL LEGESKEERT FRNWMNSLGV NPYINHLYSD LADALVIFQL 451 500 ENSTTRP00000009515/1-628 YEMIRVPVDW SHVNKPPYPA LGGNMKKXXX XXXXXXXXXX XXXXXXXXXX ENSP00000336831/1-629 YEMIRVPVNW SHVNKPPYPA LGGNMKKIEN CNYAVELGKN KAKFSLVGIA ENSBTAP00000053019/1-630 YEMIRVPVDW SHVNKPPYPA LGGNMKKIEN CNYAVELGKN KAKFSLVGIA bmy_10666T0/1-616 YEMIRVPVDW SHVNKPPYPA LGGNMKKIEN CNYAVKLGKN KAKFSLVGIA BACU012769/1-611 YEMIRVPVDW SHVNKPPYPA LGGNMKKIEN CNYAVELGKN KAKFSLVGIA 501 550 ENSTTRP00000009515/1-628 XXXXXXXXXX XXXXXXXXXX XXYTLNVLSD LGEGEKVNDA IIIEWVNQTL ENSP00000336831/1-629 GQDLNEGNST LTLALVWQLM RRYTLNVLSD LGEGEKVNDE IIIKWVNQTL ENSBTAP00000053019/1-630 GQDLNEGNST LTLALVWQLM RRYTLNVLSD LGEGEKVNDA IIIEWVNQTL bmy_10666T0/1-616 GQDLNEGNST LTLALVWQLM RRYTLNVLSD LGEGEKVNDA IIIEWVNQTL BACU012769/1-611 GQDLNEGNST LTLALVWQLM RRYTLNVLSD LGEGEKVNDA IIIEWVNQTL 551 600 ENSTTRP00000009515/1-628 KSANKNTFIS SFKDKSITTS LPVLDLIDAI APNAVRQEMI KREDLSNEDK ENSP00000336831/1-629 KSANKKTSIS SFKDKSISTS LPVLDLIDAI APNAVRQEMI RRENLSDEDK ENSBTAP00000053019/1-630 KSANKNTFIS SFKDKSISTS LPVLDLIDAI APNAVRQEMI KREDLSDEDK bmy_10666T0/1-616 KSANKNTFIS SFKDKSISTS LPVLDLIDAI APNAVRQEMI KRDDLSDEDK BACU012769/1-611 KSANKNTFIS SFKDKSISTS LPVLDLIDAI APNAVRQEMI KREDLSDEDK 601 650 ENSTTRP00000009515/1-628 LNNAKYAISV ARKIGARIYA LPDDLVEVKP KMVMTVFACL MGKGLNKIK ENSP00000336831/1-629 LNNAKYAISV ARKIGARIYA LPDDLVEVKP KMVMTVFACL MGKGLNRIK ENSBTAP00000053019/1-630 LNNAKYAISV ARKIGARIYA LPDDLVEVKP KMVMTVFACL MGKGLNKIK bmy_10666T0/1-616 LNNAKYAISV ARKIGARIYA LPDDLVEVKP KMVMTVFACL MGKGLNKIK BACU012769/1-611 LNNAKYAISV ARKIGARIYA LPDDLVEVKP KMVMTVFACL MGKGLNKIK