KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:02:06 2014 Check: 00 .. Name: ENSTTRP00000016053/1-547 Len: 552 Check: 8538 Weight: 1.00 Name: ENSBTAP00000053117/1-552 Len: 552 Check: 7797 Weight: 1.00 Name: bmy_10236T0/1-547 Len: 552 Check: 9543 Weight: 1.00 Name: BACU003488/1-551 Len: 552 Check: 3429 Weight: 1.00 // 1 50 ENSTTRP00000016053/1-547 MAAPVRLGRK RPLPVCANPL FVRWLTEWRD EAASRGRRTQ FVFQKALRSL ENSBTAP00000053117/1-552 MAAPVRLGRK RPLPVCPNPL FVRWLTEWRD EAASRGRRTQ FVFQKALRSL bmy_10236T0/1-547 MAAPVRLGRK RPMPVCANPL FVRWLTEWRD EAASRGRRTQ FVFQKALRSL BACU003488/1-551 MAAPVRLGRK RPLPVCANPL FVRWLTEWRD EAASRGRRTQ FVFQKALRSL 51 100 ENSTTRP00000016053/1-547 RRYPLPLHSG KEAKILQHFG DGLCRMLDRR LQQHKASGGD HAPCSPPGAK ENSBTAP00000053117/1-552 RRYPLPLRSG KEAKILQHFG DGLCRMLDQR LQQHKASVGD HAPCSPSGTK bmy_10236T0/1-547 RRYPLPLHSG KEAKILQHFG DGLCRMLDRR LQQHKASGGD HAPCSPPGAK BACU003488/1-551 RRYPLPLHSG KEAKILQHFG DGLCRMLDRR LQQHKASGGD HAPCSPPGAK 101 150 ENSTTRP00000016053/1-547 SPARER-PAK VQDPYMPGPT QLKAGGSGKY WPARHSGARA VLLLLYREHL ENSBTAP00000053117/1-552 SPARERPPAE VQDPSMPVPT QLKAGGPGSY WPARHSGARA VLLQLYREHL bmy_10236T0/1-547 SPARER-PAK VQDPYMP--- -LKAGDSGKY WPARHSGARA VLLLLYREHL BACU003488/1-551 SPARER-PAE VQDPYMPGPT QLKAGGSGKY WPARHSGARA VLLLLYREHL 151 200 ENSTTRP00000016053/1-547 NPSSHGFPTK DELLQRCAQK APRVAPGSAR PWPALRSLLH RNLVLRTQQP ENSBTAP00000053117/1-552 NPSGQGFLTK EELLQRCAPK VPRVAPGSAR PWPALRSLLH RNLVLRTHQP bmy_10236T0/1-547 NPSSHGFLTK EELLQRCAQK APRVAPGSAR PWPALRSLLH RNLVLRMQQP BACU003488/1-551 NPSSHGFLTK EELLQRCAQK APRVAPGSAR PWPALRSLLH RNLVLRTQQP 201 250 ENSTTRP00000016053/1-547 AXXXXXXX-X XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053117/1-552 ARYSLTPQGL ELAQKLADSE GLGLLNVGSG PEEPRGEEPE VPEVASAELG bmy_10236T0/1-547 ARYSLTPEGL ELAQKLAESE GLSLLNVGSG PEEPPGEEPA VPGAASAELG BACU003488/1-551 ARYSLTPEGL ELAQKLAESE GLSLLNVGSG PEEPPGEEPA VPGAASAELG 251 300 ENSTTRP00000016053/1-547 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053117/1-552 TSEGSIQQSP LELGPGEYRV LLCVDVGETK GAGHRPELLR ELRRLHVAHT bmy_10236T0/1-547 ASEGNVQQPP LELGPGEYRV LLCVDVGETK GAGPRPELLR ELQRLHVTHT BACU003488/1-551 ASEGHVQQPP LQLGPGEYRV LLCVDVGETK GAGPRPELLR ELQRLHVTHT 301 350 ENSTTRP00000016053/1-547 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053117/1-552 VRKLHVGDFV WVAQETSPRD PARPAELVLD HIVERKRLDD LCSSIIDGRF bmy_10236T0/1-547 VRKLHVGDFV WVAQETSPRD PARPGELVLD HIVERKRLDD LCSSIIDGRF BACU003488/1-551 VRKLHVGDFV WVAQETSPRD PARPGELVLD HIVERKRLDD LCSSIIDGRF 351 400 ENSTTRP00000016053/1-547 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVIDGFFV ENSBTAP00000053117/1-552 REQKFRLKRC GLGRRVYLVE EHGSARSLSL PESTLLQAVT NTQVIDGFFV bmy_10236T0/1-547 REQKFRLKRC GLGRRVYLVE EHGSVRNLSL PEGTLLQAVT NTQVIDGFFV BACU003488/1-551 REQKFRLKRC GLGRRVYLVE EHGSVRNLSL PEGTLLQAVT NTQVIDGFFV 401 450 ENSTTRP00000016053/1-547 KRTADIKES- AYLALLTRGL QRLYQGHTLH SRPWGTQGDP ESRAGPSPNP ENSBTAP00000053117/1-552 KRTADIKESA AYLALLTRGL QRLYQGHTLR SRPWGTSGDP ESKARPSPNP bmy_10236T0/1-547 KRTADIKESA AYLALLTRGL QRLYQGHTLH SRPWGTPGDP ESRAGPSANP BACU003488/1-551 KRTADIKESA AYLALLTRGL QRLYQGHTLH SRPWGTPGDP ESRAGPSANP 451 500 ENSTTRP00000016053/1-547 LCSLLTFNDF NAGAIKNKAQ SVREVFARQL MQVRGVSGEK AAALVDQYST ENSBTAP00000053117/1-552 LCSLLTFSDF NAGAMKNKAQ SVRDVFARQL MQVRGVSGEK AAALVARYSS bmy_10236T0/1-547 LCSLLTFNDF NAGAIKNKAQ SVREVFARQL MQVHRVSGEK AAALVDQYST BACU003488/1-551 LCSLLTFNDF NAGAIKNKAQ SVREVFARQL MQVHRVSGEK AAALVDQYST 501 550 ENSTTRP00000016053/1-547 PASLLAAYDA CATPNEKEML LSTIKCGPLQ RNLGPALSRT LSQLYCSHGP ENSBTAP00000053117/1-552 PASLLAAYDA CATPKEQEML LSTIKCGPLQ RNLGPVLSRT LSQLYCSCGP bmy_10236T0/1-547 PASLLAAYDA CATPKEKEML LSTIKCGPLQ RNLGPALSRT LSQLYCSHGP BACU003488/1-551 PASLLAAYDA CATPEEKEML LSTIKCGPLQ RNLGPALSRT LSQLYCSHGP 551 600 ENSTTRP00000016053/1-547 -- ENSBTAP00000053117/1-552 LT bmy_10236T0/1-547 LT BACU003488/1-551 LT