KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:02:30 2014 Check: 00 .. Name: ENSBTAP00000053200/1-723 Len: 723 Check: 9112 Weight: 1.00 Name: ENSTTRP00000002119/1-723 Len: 723 Check: 984 Weight: 1.00 Name: bmy_16561T0/1-434 Len: 723 Check: 8359 Weight: 1.00 Name: BACU016558/1-723 Len: 723 Check: 6444 Weight: 1.00 // 1 50 ENSBTAP00000053200/1-723 MAEFTRLQNC LALIRLRNPP VNAISTTVAR GIKESLQKAI TDDTVKAIVI ENSTTRP00000002119/1-723 MAEFTRLQNC LALIRLRNPP VNALSETVLR GIKEGLQKAL TDHTVKAIVI bmy_16561T0/1-434 ---------- ---------- ---------- ---------- ---------- BACU016558/1-723 MAEFTRLQNC LALIRLRNPP VNALSQTVLR GIKEGLQKAL TDHTVKAIVI 51 100 ENSBTAP00000053200/1-723 CGADGIFCAG ADIREFKVHK TFDIQLGDIV DEIQRNKKPV VAAIQKLALG ENSTTRP00000002119/1-723 CGADGIFSAG ADIRGFSADK TFDLTLGSVV DEVQRNKKPV VAAIQRVALG bmy_16561T0/1-434 ---------- ---------- ---------- --MHRDSCP- ---------- BACU016558/1-723 CGADGIFSAG ADIRGFSADM TFDLTLGSVV DEIQRNKKPV VAAIQRVALG 101 150 ENSBTAP00000053200/1-723 GGLELALGCH YRIAHAEAQV GFPEVTLGIL PGARGTQLLP RLVGVPAALD ENSTTRP00000002119/1-723 GGLELALGCH YRIAHAEAQV GFPEVTLGIL PGARGTQLLP RLIGVPAALD bmy_16561T0/1-434 ------LDC- ---------- ---------- ---------- ---------- BACU016558/1-723 GGLELALGCH YRIAHAEAQV GFPEVTLGIL PGARGTQLLP RLIGVPAALD 151 200 ENSBTAP00000053200/1-723 LIISGRHISA NEALKLGIID KIVNSDPIEE SIKFAQRISD QSPESRRICN ENSTTRP00000002119/1-723 LITSGRHISA NEALKLGILD KIVNSDPVEE AIKFAQRVSX XXXXXXXXXX bmy_16561T0/1-434 ---------- ---------- ---------- ---------- ------KVY- BACU016558/1-723 LITSGRHISA NEALKLGILD KIVNSDPVEE AIKFAQRVSD QSLESRRIYN 201 250 ENSBTAP00000053200/1-723 MPVPSLPNMD AIFSEALLQV RKRYPGWLSP EACVQAVQAA VQYPYDMGSK ENSTTRP00000002119/1-723 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16561T0/1-434 ---------- ---------- ---------- ---------- ---------- BACU016558/1-723 KPIQSLSNMD TIFSEALLKM RKQHPGCLSQ ETSIRAVQAA VQYPYEVGIK 251 300 ENSBTAP00000053200/1-723 KEKELGLYLN TSGQAKALQY VFFAERMANK WSTPSGASWK TALGRPISSV ENSTTRP00000002119/1-723 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16561T0/1-434 ---------- ---------- ---------- ---------- ---------- BACU016558/1-723 KEKELYVYLQ RSGQARALQY SFLAERTTRK WSTPSGASWK TALARPISSV 301 350 ENSBTAP00000053200/1-723 GVLGLGTMGR GIVISFAKAQ IPVIAVESDK KQLETASKII TSILEKEASK ENSTTRP00000002119/1-723 XXXXLGTMGR GIAISFAMAK IPVIAVESDK KQLETANKII TSILEKEVSK bmy_16561T0/1-434 --IGLGTMGR GIAISFAMAK IPVIAVESDK KQLETANKII TSILQKEVSK BACU016558/1-723 GILGLGTMGR GIAISFAMAK IPVIAVESDK KQLETANKII TSILQKEVSK 351 400 ENSBTAP00000053200/1-723 MQQSGHPWSG PKPRLTTSMK ELSGVDLVIE AVYEDMNLKK HVFAELSAVC ENSTTRP00000002119/1-723 MQQSGHSWSG PKPRLTTSIK ELSGVDLVIE AVFEERNLKK QVFAELSAVC bmy_16561T0/1-434 MQQSGHPWSG PKPRLTTSMK ELSGVDLVIE AVFEERNLKK QVFAELSAVC BACU016558/1-723 MQQSGHPWSG PKPRLTTSMK ELSGVDLVIE AVFEERNLKK QVFAELSAVC 401 450 ENSBTAP00000053200/1-723 KPEALLCTNT SALDIDEIAS SSDRPHLVIG THFFSPAHVM KLLEVIPSRF ENSTTRP00000002119/1-723 KPEAFLCTNT SALDIDEIAS SSDRPHLVIG THFFSPAHVM KLLEVIPSRY bmy_16561T0/1-434 KPETFLCTNT SALDIDEIAS SSDRPHLVIG THFFSPAHVM KLLEVIPSRY BACU016558/1-723 KPEAFLCTNT SALDIDEIAS SSDRPHLVIG THFFSPAHVM KLLEVIPSRY 451 500 ENSBTAP00000053200/1-723 SSPTTIATVM NLSKKIKKIG VVVGNCFGFV GNRMLRSYYD QTYFLLEEGS ENSTTRP00000002119/1-723 SSPTTIATIM NLSKKINKIG VVVGNCFGFV GNRMLKPYYN QTYFLLEEGS bmy_16561T0/1-434 SSPTTIATIM NLSKKIKKIG VVVGNCFGFV GNRMLKPYYN QTYFLLEEGS BACU016558/1-723 SSPTTIATIM NLSKKIKKIG VVVGNCFGFV GNRMLKPYYN QTYFLLEEGS 501 550 ENSBTAP00000053200/1-723 KPEEIDEVLE EFGFKMGPFR VSDLAGLDIG WKSRKGQGLT GPTLPPGSSA ENSTTRP00000002119/1-723 KPEEIDQVLE EFGFKMGPFR VSDLAGLDVG WKSRKGQGLT GPTLPPGTPS bmy_16561T0/1-434 KPEEIDQVLE EFGFKMGPFR VSDLAGLDVG WKSRKGQGLT GPTLPPGTPS BACU016558/1-723 KPEEIDQVLE EFGFKMGPFR VSDLAGLDVG WKSRKGQGLT GPTLPPGTPS 551 600 ENSBTAP00000053200/1-723 RKRGGRRYCP IPDMLCESGR FGQKTGKGWY LYDKPLGRIH KPDPWLSQFL ENSTTRP00000002119/1-723 RKRGSWRYCP IPDMLCESGR FGQKTGEGWY LYDKPLGRIH KPNPWLSKFL bmy_16561T0/1-434 RKRGSWRYCP IPDMLCESGR FGQKTGEGWY LYDKPLGRIH KPNPWLSKFL BACU016558/1-723 RKRGSWRYCP IPDMLCESGR FGQKTGEGWY LYDKPLGRIH KPNPWLSKFL 601 650 ENSBTAP00000053200/1-723 AQYRETYHIK PRIISRDEIL ERCLYSLINE AFRILGEGMA AIPEHIDVIY ENSTTRP00000002119/1-723 TQYRETYNIE PRIISRDEIL ERCLYSLINE AFRILGEGMA ATPEHIDVVY bmy_16561T0/1-434 TQYRETYHIE PRIISRDEIL ERCLYSLINE AFRILGEGIA ATPEHIDVVY BACU016558/1-723 TQYRETYHIE PRVISRDEIL ERCLYSLINE AFRILGEGIA ATPEHIDVVY 651 700 ENSBTAP00000053200/1-723 LHGFGWPRHR GGPMFYASTV GLPTVLEKLQ KYHRQNPDIP QLEPCDYLKK ENSTTRP00000002119/1-723 LHGYGWPRHR GGPMFYASTV GLPTVVEKLQ KYHRQNPDIP QLEPCDYLKK bmy_16561T0/1-434 LHGYGWPRHR GGPMFYASTV GLPTVVEKLQ KYHRQNPDIP QLEPCDYLKK BACU016558/1-723 LNGYGWPRHR GGPMFYASTV GLPTVVEKLQ KYHRQNPDIP QLEPCDYLKK 701 750 ENSBTAP00000053200/1-723 LASQGNLPLE EWQSLAGPPS SKL ENSTTRP00000002119/1-723 LASQGNPPLK EWQSLAGPPS SKL bmy_16561T0/1-434 LASQGNPPLK EWQSLAGPPS SKL BACU016558/1-723 LASQGNPPLK EWQSLAGPPS SKL