KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:02:38 2014 Check: 00 .. Name: bmy_00652T0/1-485 Len: 706 Check: 6706 Weight: 1.00 Name: ENSTTRP00000012525/1-706 Len: 706 Check: 9130 Weight: 1.00 Name: ENSP00000263125/1-706 Len: 706 Check: 9002 Weight: 1.00 Name: BACU001769/1-706 Len: 706 Check: 8838 Weight: 1.00 Name: ENSBTAP00000053216/1-706 Len: 706 Check: 9521 Weight: 1.00 // 1 50 bmy_00652T0/1-485 ---------- ---------- ---------- ------MLNQ NGQMYIQKKP ENSTTRP00000012525/1-706 MSPFLRIGLS NFDCGSCQPC QGEAVNPYCA VLVKEYVESE NGQMYIQKKP ENSP00000263125/1-706 MSPFLRIGLS NFDCGSCQSC QGEAVNPYCA VLVKEYVESE NGQMYIQKKP BACU001769/1-706 MSPFLRIGLS NFDCGPCQPC QGEAVNPYCA VLVKEYVESE NGQMYIQKKP ENSBTAP00000053216/1-706 MSPFLRIGLS NFDCGSCQSC QGEAVNPYCA VLVKEYVESE NGQMYIQKKP 51 100 bmy_00652T0/1-485 TMYPPWDSTF DAHINKGRVM QIIVKGKNVD LISETTVELY SLAERCRKNN ENSTTRP00000012525/1-706 TMYPPWDSTF DAHINKGRVM QIIVKGKNVD LISETTVELY SLAERCRKNN ENSP00000263125/1-706 TMYPPWDSTF DAHINKGRVM QIIVKGKNVD LISETTVELY SLAERCRKNN BACU001769/1-706 TMYPPWDSTF DAHINKGRVM QIIVKGKNVD LISETTVELY SLAERCRKNN ENSBTAP00000053216/1-706 TMYPPWDSTF DAHINKGRVM QIIVKGKNVD LISETTVELY SLAERCRKNN 101 150 bmy_00652T0/1-485 GKTEIWLELK PQGRMLMNAR YFLEMSDTKD MSEFENEGFF ALHQRRGAIK ENSTTRP00000012525/1-706 GKTEIWLELK PQGRMLMNAR YFLEMSDTKD MSEFENEGFF ALHQRRGAIK ENSP00000263125/1-706 GKTEIWLELK PQGRMLMNAR YFLEMSDTKD MNEFETEGFF ALHQRRGAIK BACU001769/1-706 GKTEIWLELK PQGRMLMNAR YFLEMSDTKD MSEFENEGFF ALHQRRGAIK ENSBTAP00000053216/1-706 GKTEIWLELK PQGRMLMNAR YFLEMSDTKD MNEFETDSFF ALHHRRGAIK 151 200 bmy_00652T0/1-485 QAKVHHVKCH EFTATFFPQP TFCSVCHEFV WGLNKQGYQC RQCNAAIHKK ENSTTRP00000012525/1-706 QAKVHHVKCH EFTATFFPQP TFCSVCHEFV WGLNKQGYQC RQCNAAIHKK ENSP00000263125/1-706 QAKVHHVKCH EFTATFFPQP TFCSVCHEFV WGLNKQGYQC RQCNAAIHKK BACU001769/1-706 QAKVHHVKCH EFTATFFPQP TFCSVCHEFV WGLNKQGYQC RQCNAAIHKK ENSBTAP00000053216/1-706 QAKVHHVKCH EFTATFFPQP TFCSVCHEFV WGLNKQGYQC QQCNAAIHKK 201 250 bmy_00652T0/1-485 CIDKVIAKCT GSAINSRETM FHKERFKIDM PHRFKVYNYK SPTFCEHCGT ENSTTRP00000012525/1-706 CIDKVIAKCT GSAVNSRETM XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263125/1-706 CIDKVIAKCT GSAINSRETM FHKERFKIDM PHRFKVYNYK SPTFCEHCGT BACU001769/1-706 CIDKVIAKCT GSAINSRETM FHKERFKIDM PHRFKVYNYK SPTFCEHCGT ENSBTAP00000053216/1-706 CIDKVIAKCT GSAINSRETM FHKERFKIDM PHRFKVYNYK SPTFCEHCGT 251 300 bmy_00652T0/1-485 LLWGLARQGL KCDACGMNVH HRCQTKVANL CGINQKLMAE ALAMIESTQQ ENSTTRP00000012525/1-706 XXXXXXXXXX XXXXCGMNVH HRCQTKVANL CGINQKLMAE ALAMIESAQQ ENSP00000263125/1-706 LLWGLARQGL KCDACGMNVH HRCQTKVANL CGINQKLMAE ALAMIESTQQ BACU001769/1-706 LLWGLARQGL KCDACGMNVH HRCQTKVANL CGINQKLMAE ALAMIESTQQ ENSBTAP00000053216/1-706 LLWGLARQGL KCDACGMNVH HRCQTKVANL CGINQKLMAE ALAMIESTQQ 301 350 bmy_00652T0/1-485 ARCLRDSEHI FREGPVEIGL PCSIKGEAKL PYGPAPGKKE PQGISWESPL ENSTTRP00000012525/1-706 ARCLRDSEHI FREGPVEIGL PCSIKGEAKL PYGPAPGKKE PQGISWESPL ENSP00000263125/1-706 ARCLRDTEQI FREGPVEIGL PCSIKNEARP PCLPTPGKRE PQGISWESPL BACU001769/1-706 ARCLRDSEHI FREGPVEIGL PCSIKGEAKL PYGPAPGKKE PQGISWESPL ENSBTAP00000053216/1-706 ARCLRDSEHI FREGPVEIGL PCSIKGEAKP PYVPGPGKKE PQGISWESPL 351 400 bmy_00652T0/1-485 DEMEKVGHRP EPELNVERPS LHMKLKIEDF TLHKMLGKGS FGKVFLAEFK ENSTTRP00000012525/1-706 DEMEKVGHRP EPELNVERPS LRMKLKIEDF TLHKMLGKGS FGKVFLAEFK ENSP00000263125/1-706 DEVDKMCHLP EPELNKERPS LQIKLKIEDF ILHKMLGKGS FGKVFLAEFK BACU001769/1-706 DEMEKVGHRP EPELNVERPS LHMKLKIEDF TLHKMLGKGS FGKVFLAEFK ENSBTAP00000053216/1-706 EEMEKVCHRP EPEPNKERGS LRMKLKIEDF TLHKMLGKGS FGKVFLAEFK 401 450 bmy_00652T0/1-485 KSNQFFAIKA LKKDVVLMDD DVECTMVEKR VLSLAWEHPF LTHMFCTFQT ENSTTRP00000012525/1-706 KTNQFFAIKA LKKDVVLMDD DVECTMVEKR VLSLAWEHPF LTHMFCTFQT ENSP00000263125/1-706 KTNQFFAIKA LKKDVVLMDD DVECTMVEKR VLSLAWEHPF LTHMFCTFQT BACU001769/1-706 KSNQFFAIKA LKKDVVLMDD DVECTMVEKR VLSLAWEHPF LTHMFCTFQT ENSBTAP00000053216/1-706 KTNQFFAIKA LKKDVVLMDD DVECTMVEKR VLSLAWEHPF LTHMFCTFQT 451 500 bmy_00652T0/1-485 KLEL------ ---------- ---------- ---------- ---------- ENSTTRP00000012525/1-706 KENLFFVMEY LNGGDLMYHI QSCHKFDLCR ATFYAAEIIL GLXXXXXXXX ENSP00000263125/1-706 KENLFFVMEY LNGGDLMYHI QSCHKFDLSR ATFYAAEIIL GLQFLHSKGI BACU001769/1-706 KENLFFVMEY LNGGDLMYHI QSCHKFDLCR ATFYAAEIIL GLQFLHSKGI ENSBTAP00000053216/1-706 KENLFFVMEY LNGGDLMYHI QSCHKFDLCR ATFYAAEIIL GLQFLHSKGI 501 550 bmy_00652T0/1-485 ---------- ------QAEF ASFPVTGNAL ----KIPSLC N--DLPKPEK ENSTTRP00000012525/1-706 XXXDLKLDNI LLDKDGHIKI ADFGMCKENM LGDARTNTFC GTPDYIAPEI ENSP00000263125/1-706 VYRDLKLDNI LLDKDGHIKI ADFGMCKENM LGDAKTNTFC GTPDYIAPEI BACU001769/1-706 VYRDLKLDNI LLDKDGHIKI ADFGMCKENM LGDTRTNTFC GTPDYIAPEI ENSBTAP00000053216/1-706 VYRDLKLDNI LLDKDGHIKI ADFGMCKENM LGDARTNTFC GTPDYIAPEI 551 600 bmy_00652T0/1-485 LVC------- ---------- ---------- ---------- ---------- ENSTTRP00000012525/1-706 LLGQKYNHSV DWWSFGVLLY EMLIGQSPFH GQDEEELFHS IRMDSPFYPR ENSP00000263125/1-706 LLGQKYNHSV DWWSFGVLLY EMLIGQSPFH GQDEEELFHS IRMDNPFYPR BACU001769/1-706 LLGQKYNHSV DWWSFGVLLY EMLIGQSPFH GQDEEELFHS IRMDSPFYPR ENSBTAP00000053216/1-706 LLGQKYNHSV DWWSFGVLLY EMLVGQSPFH GQDEEELFHS IRMDNPFYPR 601 650 bmy_00652T0/1-485 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012525/1-706 WLEKEAKDLL VQLFVREPEK RLGVRGDIRQ HPLFREINWE ELERKEIDPP ENSP00000263125/1-706 WLEKEAKDLL VKLFVREPEK RLGVRGDIRQ HPLFREINWE ELERKEIDPP BACU001769/1-706 WLEKEAKDLL VKLFVREPEK RLGVRGDIRQ HPLFREINWE ELERKEIDPP ENSBTAP00000053216/1-706 WLEKEAKDLL VKLFVREPEK RLGVRGDIRQ HPLFREINWE ELERKEIDPP 651 700 bmy_00652T0/1-485 -------PY- CSSVPPSAVL PKPQNTSFPR ---NTDILHL LPGY----PG ENSTTRP00000012525/1-706 FRPKVKSPYD CSNFDKEFLN EKPRLSFADR ALINSMDQNM FQNFSFMNPG ENSP00000263125/1-706 FRPKVKSPFD CSNFDKEFLN EKPRLSFADR ALINSMDQNM FRNFSFMNPG BACU001769/1-706 FRPKVKSPYD CSNFDKEFLN EKPRLSFADR ALINSMDQNM FRNFSFMNPG ENSBTAP00000053216/1-706 FRPKVKSPYD CSNFDKEFLN EKPRLSFADR ALINSMDQNM FRNFSFMNPG 701 750 bmy_00652T0/1-485 K----- ENSTTRP00000012525/1-706 MEKLIS ENSP00000263125/1-706 MERLIS BACU001769/1-706 MEKLIS ENSBTAP00000053216/1-706 MEKLIS