KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:00 2014 Check: 00 .. Name: ENSP00000361845/1-475 Len: 475 Check: 1337 Weight: 1.00 Name: ENSBTAP00000053228/1-475 Len: 475 Check: 2240 Weight: 1.00 Name: ENSTTRP00000005585/1-475 Len: 475 Check: 1755 Weight: 1.00 Name: BACU000399/1-396 Len: 475 Check: 9909 Weight: 1.00 Name: bmy_02080T0/1-422 Len: 475 Check: 4596 Weight: 1.00 // 1 50 ENSP00000361845/1-475 MGMWASLDAL WEMPAEKRIF GAVLLFSWTV YLWETFLAQR QRRIYKTTTH ENSBTAP00000053228/1-475 MGMWALLDAI WEMPAEKRIF GAVLLFSWTV YLWETFLAQR QRRVYKTTTH ENSTTRP00000005585/1-475 MGMWASLDAV WEMSAEKRIF GAVLLFSWTV YLWETFLARR QRRIYKTTTH BACU000399/1-396 MGMWASLDAM WDMSAEKRIF GAVLLFSWTV YLWETFLSRR QRRIYKTTTH bmy_02080T0/1-422 --MWASLDAM WEMSAEKRIF GAVLVFSWTV YLWETFLSRR QRRIYKTTTR 51 100 ENSP00000361845/1-475 VPPELGQIMD SETFEKSRLY QLDKSTFSFW SGLYSETEGT LILLFGGIPY ENSBTAP00000053228/1-475 VPLELGQIMD SETFEKSRLY QLDKSTFSFW SGLYSEVEGT LILLFGGIPY ENSTTRP00000005585/1-475 VPLELGQIMD SETFEKSRLY QLDKSTFSFW SGLYSEVEGT LILLFGGIPY BACU000399/1-396 VPLELGQIMD SETFEKSRLY QLDKSTFSFW SGLYSEIEGT LILLFGGIPY bmy_02080T0/1-422 VPLELGQIMD SETFEKSRLY QLDKSTFSFW SGLYSEIEGT LILLFGGIPY 101 150 ENSP00000361845/1-475 LWRLSGRFCG YAGFGPEYEI TQSLVFLLLA TLFSALTGLP WSLYNTFVIE ENSBTAP00000053228/1-475 LWRVSGRFCG YAGFGPEYEI TQSLVFLLLA TLFSALTGLP WSLYNTFVIE ENSTTRP00000005585/1-475 LWRLSGRFCG YAGFGPEYEI TQSLVFLLLA TLFSALTGLP WSLYNTFVIE BACU000399/1-396 LWRLSGRFCG HAGFGPEYEI TQSLVFLLLA TLFSALTGLP WSLYNTFVIE bmy_02080T0/1-422 LWRLSGRFCG YAGFGPEYEI TQSLVFLLLA TLFSALTGLP WSLYNTFVIE 151 200 ENSP00000361845/1-475 EKHGFNQQTL GFFMKDAIKK FVVTQCILLP VSSLLLYIIK IGGDYFFIYA ENSBTAP00000053228/1-475 EKHGFNQQTL GFFMKDAIKK FVVTQCILLP VSSLLLYIIK IGGDYFFIYA ENSTTRP00000005585/1-475 EKHGFNQQTL GFFMKDAIKK FIVTQCILLP VSSLLLYIIK IGGDYFFIYA BACU000399/1-396 EKHGFNQQ-- ---------- ---------- ---------- ---------- bmy_02080T0/1-422 EKHGFNQQ-- ---------- ---------- ---------- ---------- 201 250 ENSP00000361845/1-475 WLFTLVVSLV LVTIYADYIA PLFDKFTPLP EGKLKEEIEV MAKSIDFPLT ENSBTAP00000053228/1-475 WLFTLVVSLV LVTIYADYIA PLFDKFTPLP EGKLKQEIEV MAKSIDFPLT ENSTTRP00000005585/1-475 WLFTLVVSLV LVTIYADYIA PLFDKFTPLP EGKLKQEIEI MAKSIDFPLT BACU000399/1-396 ---------V LVTIYADYIA PLFDKFTPLP EGKLKQEIEV MAKSIDFPLT bmy_02080T0/1-422 ---------V LVTIYADYIA PLFDKFTPLP EGKLKQEIEV MAKSIDFPLT 251 300 ENSP00000361845/1-475 KVYVVEGSKR SSHSNAYFYG FFKNKRIVLF DTLLEEYSVL NKDIQEDSGM ENSBTAP00000053228/1-475 KVYVVEGSKR SSHSNAYFYG FFKNKRIVLF DTLLEEYSVL NKDIQEESGM ENSTTRP00000005585/1-475 KVYVVQGSKR SSHSNAYFYG FFKNKRIVLF DTLLEEYSVL NKDIQEESGM BACU000399/1-396 KVYVVE---- ---------- ---------- ----EEYSVL NKDKQEESGM bmy_02080T0/1-422 KVYVVEGSKR SSHSNAYFYG FFKNKRIVLF DTLLEEYSVL NKDNQEESGM 301 350 ENSP00000361845/1-475 EPRNEEEGNS EEIKAKVKNK KQGCKNEEVL AVLGHELGHW KLGHTVKNII ENSBTAP00000053228/1-475 EPRNDGEGDS EEIKAKVKNK KQGCKNEEVL AVLGHELGHW KLGHTVKNII ENSTTRP00000005585/1-475 EPCNDGEGDS EEIKAKVKNK KQGCKNEEVL AVLGHELGHW KLGHTVKNII BACU000399/1-396 EPRNDGEGDS EEIKAKVKNK KQGCKNEEVL AVLGHELGHW KLGHTVKNII bmy_02080T0/1-422 EPRNDGEGDS EEIKAKVKNK KQGCKNEEVL AVLGHELGHW KLGHTVKNII 351 400 ENSP00000361845/1-475 ISQMNSFLCF FLFAVLIGRK ELFAAFGFYD SQPTLIGLLI IFQFIFSPYN ENSBTAP00000053228/1-475 ISQMNSFLCF FLFAVLIGRK ELFVAFGFND SQPTLIGLLI IFQFIFSPYN ENSTTRP00000005585/1-475 ISQMNSFLCF FLFAVLIGRK ELFVAFGFYD SQPTLIGLLI IFQFIFSPYN BACU000399/1-396 ISQMNSFLCF FLFAVLIGRK ELFVAFGFYD SQPTLIGLLI IFQFIFSPYN bmy_02080T0/1-422 ISQMNSFLCF FLFAVLIGRK ELFVAFGFYD SQPTLIGLLI IFQFIFSPYN 401 450 ENSP00000361845/1-475 EVLSFCLTVL SRRFEFQADA FAKKLGKAKD LYSALIKLNK DNLGFPVSDW ENSBTAP00000053228/1-475 EVLSFCLTVL SRRFEFQADA FAKKLGKAKD LYSALIKLNK DNLGFPVSDW ENSTTRP00000005585/1-475 EVLSFCLTVL SRRFEFQADA FAKKLGKAKD LYSALIKLNK DNLGFPVSDW BACU000399/1-396 EVLSFCLTVL SRRFEFQADA FAKKLGKAKD LYSALIKLNK DNLGFPVSDW bmy_02080T0/1-422 EVLSFCLTVL SRRFEFQADA FAKKLGKAKD LYSALIKLNK DNLGFPVSDW 451 500 ENSP00000361845/1-475 LFSMWHYSHP PLLERLQALK TMKQH ENSBTAP00000053228/1-475 LFSMWHYSHP PLLERLQALK NSKQD ENSTTRP00000005585/1-475 LFSMWHYSHP PLLERLQALK NSKQD BACU000399/1-396 LFSMWHYSHP PLLERLQALK NSKQD bmy_02080T0/1-422 LFSMWHYSHP PLLERLQALK NSKQD