KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:01 2014 Check: 00 .. Name: ENSP00000290573/1-917 Len: 936 Check: 6196 Weight: 1.00 Name: ENSBTAP00000053231/1-914 Len: 936 Check: 7530 Weight: 1.00 Name: ENSTTRP00000005874/1-896 Len: 936 Check: 8148 Weight: 1.00 Name: bmy_20083T0/1-891 Len: 936 Check: 47 Weight: 1.00 Name: BACU010585/1-922 Len: 936 Check: 9225 Weight: 1.00 // 1 50 ENSP00000290573/1-917 MIASHLLAYF FTELNHDQVQ -----KVDQY LYHMRLSDET LLEISKRFRK ENSBTAP00000053231/1-914 -VQRHLVSIY VT-MHFPLFQ ------VDQY LYHMRLSDET LLEIAKRFRK ENSTTRP00000005874/1-896 ---------- ---------- ------VDQY LYHMRLSDET LLEIAKRFRK bmy_20083T0/1-891 MIASHLLAYF FTELNHDQVQ -----KVDQY LYHMRLSDET LLEIAKRFRK BACU010585/1-922 MIASHLLAYF FTELNHDQVQ KKNVGKVDQY LYHMRLSDET LLEIAKRFRK 51 100 ENSP00000290573/1-917 EMEKGLGATT HPTAAVKMLP TFVRSTPDGT EHGEFLALDL GGTNFRVLWV ENSBTAP00000053231/1-914 EMEKGLGATT HPTASVKMLP TFVRSTPDGT EHGEFLALDL GGTNFRVLWV ENSTTRP00000005874/1-896 EMEKGLGATT HPTASVKMLP TFVRSTPDGT EHGEFLALDL GGTNFRVLWV bmy_20083T0/1-891 EMEKGLGATT HPTASVKMLP TFVRSTPDGT EHGEFLALDL GGTNFRVLWV BACU010585/1-922 EMEKGLGATT HPTASVKMLP TFVRSTPDGT EHGEFLALDL GGTNFRVLWV 101 150 ENSP00000290573/1-917 KVTDNGLQKV EMENQIYAIP EDIMRGSGTQ LFDHIAECLA NFMDKLQIKD ENSBTAP00000053231/1-914 RVTDNGLQKV EMESQIYAIP EDIMRGSGTQ LFDHIAECLA NFMDKLQIKD ENSTTRP00000005874/1-896 KVTDNGLQKV EMENQIYAIP EDIMRGSGTQ LFDHIAECLA NFMDKLQIKD bmy_20083T0/1-891 KVTDNGLQKV EMENQIYAIP EDIMRGSGTQ ---------- ---------- BACU010585/1-922 KVTDNGLQKV EMENQIYAIP EDIMRGSGTQ LFDHIAECLA NFMDKLQIKD 151 200 ENSP00000290573/1-917 KKLPLGFTFS FPCHQTKLDE SFLVSWTKGF KSSGVEGRDV VALIRKAIQR ENSBTAP00000053231/1-914 KKLPLGFTFS FPCLQTKLDE SFLVSWTKGF KSSGVEGKDV VTLIRKAIQR ENSTTRP00000005874/1-896 KKLPLGFTFS FPCLQTKLDE SFLVSWTKGF KSSGVEGKDV VTLIRKAIQR bmy_20083T0/1-891 ---------- ---------- SFLVSWTKGF KSSGVEGKDV VTLIRKAIQR BACU010585/1-922 KKLPLGFTFS FPCLQTKLDE SFLVSWTKGF KSSGVEGKDV VTLIRKAIQR 201 250 ENSP00000290573/1-917 RGDFDIDIVA VVNDTVGTMM TCGYDDHNCE IGLIVGTGSN ACYMEEMRHI ENSBTAP00000053231/1-914 RGDFDIDIVA VVNDTVGTMM TCGYDDQNCE IGLIVGTGSN ACYMEEMRHI ENSTTRP00000005874/1-896 RGDFDIDIVA VVNDTVGTMM TCGYDDQNCE IGLIVGTGSN ACYMEEMRHI bmy_20083T0/1-891 RGDFDIDIVA VVNDTVGTMM TCGYDDQNCE IGLIVGTGSN ACYMEEMRHI BACU010585/1-922 RGDFDIDIVA VVNDTVGTMM TCGYDDQNCE IGLIVGTGSN ACYMEEMRHI 251 300 ENSP00000290573/1-917 DMVEGDEGRM CINMEWGAFG DDGSLNDIRT EFDQEIDMGS LNPGKQLFEK ENSBTAP00000053231/1-914 DTVEGDEGRM CINMEWGAFG DDGALDDIRT EFDQEIDMGS LNPGKQLFEK ENSTTRP00000005874/1-896 DMVEGDEGRM CINMEWGAFG DDGVLDDIRT EFDQEIDMGS LNPGKQLFEK bmy_20083T0/1-891 DMVEGDEGRM CINMEWGAFG DDGALDDIRT EFDQEIDMGS LNPGKQLFEK BACU010585/1-922 DMVEGDEGRM CINMEWGAFG DDGALDDIRT EFDQEIDMGS LNPGKQLFEK 301 350 ENSP00000290573/1-917 MISGMYMGEL VRLILVKMAK EELLFGGKLS PELLNTGRFE TKDISDIEG- ENSBTAP00000053231/1-914 MISGMYMGEL VRLILVKMAK EELLFGGKLS PELLATGHFE TKDVSDIEG- ENSTTRP00000005874/1-896 MISGMYMGEL VRLILVKMAK EELLFGGKLS PELLATGHFE TKDVSDIEG- bmy_20083T0/1-891 MISGMYMGEL VRLILVKMAK EELLFGGKLS PELLATGHFE TKDVSDIEGS BACU010585/1-922 MISGMYMGEL VRLILVKMAK EELLFGGKLS PELLATGHFE TKDVSDIEG- 351 400 ENSP00000290573/1-917 ---------- ---EKDGIRK AREVLMRLGL DPTQEDCVAT HRICQIVSTR ENSBTAP00000053231/1-914 ---------- ---EKDGIQK AREILVRLGL DPTHEDCVAT HRVCQIVSTR ENSTTRP00000005874/1-896 ---------- ---EKDGIRK AREILVRLGL DPTQEDCVAT HRVCQIVSTR bmy_20083T0/1-891 LDGPEIDPFI SEREKDGIQK AREILVRLGL DPTQEDCVAT HRVCQIVSTR BACU010585/1-922 ---------- ---EKDGIQK AREILVRLGL DPTQEDCVAT HRVCQIVSTR 401 450 ENSP00000290573/1-917 SASLCAATLA AVLQRIKENK GEERLRSTIG VDGSVYKKHP HFAKRLHKTV ENSBTAP00000053231/1-914 SASLCAATLA AVLWRIKENK GVDRLRSTVG VDGSVYKKHP HFAKRLHKTV ENSTTRP00000005874/1-896 SASLCAATLA AVLRRIKENK GEERLRSTIG VDGSVYKKHP HFAKRLHKTV bmy_20083T0/1-891 SASLCAATLA AVLRRIKENK GEERLRSTIG VDGSVYKKHP HFAKRLHKTV BACU010585/1-922 SASLCAATLA AVLRRIKENK GEERLRSTIG VDGSVYKKHP HFAKRLHKTV 451 500 ENSP00000290573/1-917 RRLVPGCDVR FLRSEDGSGK GAAMVTAVAY RLADQHRARQ KTLEHLQLSH ENSBTAP00000053231/1-914 RRLVPDCDVR FLRSEDGSGK GAAMVTAVAY RLADQHRARQ KTLESLKLSR ENSTTRP00000005874/1-896 RRLVPDCDIR FLRSEDGSGK GAAMVTAVAY RLADQHRARQ KTLESLKLSR bmy_20083T0/1-891 RRLVPDCDIR FLRSEDGSGK GAAMVTAVAY RLVDQHRARQ KTLEPLKLSR BACU010585/1-922 RRLVPDCDIR FLRSEDGSGK GAAMVTAVAY RLVDQHRARQ KTLEPLKLSR 501 550 ENSP00000290573/1-917 DQLLEVKRRM KVEMERGLSK ETHASAPVKM LPTYVCATPD GTEKGDFLAL ENSBTAP00000053231/1-914 EQLLEVKRRM KIEMERGLSK ETHAIAPVKM LPTYVCATPD GTEKGDFLAL ENSTTRP00000005874/1-896 EQLLEVKRRM KVEMERGLSK ETHTIAPVKM LPTYVCATPD GTEKGDFLAL bmy_20083T0/1-891 EQLLEVKRRM KVEMERGLSK ETHTIAPVKM LPTYVCATPD GTEKGDFLAL BACU010585/1-922 EQLLEVKRRM KVEMERGLSK ETHTIAPVKM LPTYVCATPD GTEKGDFLAL 551 600 ENSP00000290573/1-917 DLGGTNFRVL LVRVRNGKWG GVEMHNKIYA IPQEVMHGTG DELFDHIVQC ENSBTAP00000053231/1-914 DLGGTNFRVL LVRVRNGKRR GVEMHNKIYS IPQEVMHGTG DELFDHIVQC ENSTTRP00000005874/1-896 DLGGTNFRVL LVRVRNGKRR GVEMHNKIYS IPREVMHGTG DELFDHIVQC bmy_20083T0/1-891 DLGGTNFRVL LVRVRNGKRR GVEMHNKIYS IPREVMHGTG DELFDHIVQC BACU010585/1-922 DLGGTNFRVL LVRVRNGKRR GVEMHNKIYS IPREVMHGTG DELFDHIVQC 601 650 ENSP00000290573/1-917 IADFLEYMGM KGVSLPLGFT FSFPCQQNSL DESILLKWTK GFKASGCEGE ENSBTAP00000053231/1-914 IADFLEYMGM KGVSLPLGFT FSFPCQQNSL DESILLKWTK GFKASGCEGE ENSTTRP00000005874/1-896 IADFLEYMGM KGVSLPLGFT FSFPCQQNSL DESILLKWTK GFKASGCEGE bmy_20083T0/1-891 IADFLEYMGM KGVSLPLGFT FSFPCQQNSL DESILLKWTK GFKASGCEGE BACU010585/1-922 IADFLEYMGM KGVSLPLGFT FSFPCQQNSL DESILLKWTK GFKASGCEGE 651 700 ENSP00000290573/1-917 DVVTLLKEAI HRREEFDLDV VAVVNDTVGT MMTCGFEDPH CEVGLIVGTG ENSBTAP00000053231/1-914 DVVMLLKEAI HRREEFDLDV VAVVNDTVGT MMTCGYEDPH CEVGLIVGTG ENSTTRP00000005874/1-896 DVVTLLKEAI HRREEFDLDV VAVVNDTVGT MMTCGYEDPH CEVGLIVGTG bmy_20083T0/1-891 DVVTLLKEAI HRREEFDLDV VAVVNDTVGT MMTCGYEDPH CEVGLIVGTG BACU010585/1-922 DVVTLLKEAI HRREEFDLDV VAVVNDTVGT MMTCGYEDPH CEVGLIVGTG 701 750 ENSP00000290573/1-917 SNACYMEEMR NVELVEGEEG RMCVNMEWGA FGDNGCLDDF RTEFDVAVDE ENSBTAP00000053231/1-914 SNACYMEEMR NVELVEGEEG RMCVNMEWGA FGDNGCLDDL RTEFDAAVDE ENSTTRP00000005874/1-896 SNACYMEEMR NVELVEGEEG RMCVNMEWGA FGDNGCLDDF RTEFDAAVDE bmy_20083T0/1-891 SNACYMEEMR NVELVEGEEG RMCVNMEWGA FGDNGCLDDF RTEFDAAVDE BACU010585/1-922 SNACYMEEMR NVELVEGEEG RMCVNMEWGA FGDNGCLDDF RTEFDAAVDE 751 800 ENSP00000290573/1-917 LSLNPGKQRF EKMISGMYLG EIVRNILIDF TKRGLLFRGR ISERLKTRGI ENSBTAP00000053231/1-914 LSLNPGRQRF EKMISGMYLG EIVRNILIDF TKRGLLFRGR ISERLKTRGI ENSTTRP00000005874/1-896 LSLNPGKQRF EKMISGMYLG EIVRNILIDF TKHGLLFRGR ISERLKTRGI bmy_20083T0/1-891 LSLNAGKQRF EKMISGMYLG EIVRNILIDF TKHGLLFRGR ISERLKARGI BACU010585/1-922 LSLNAGKQRF EKMISGMYLG EIVRNILIDF TKHGLLFRGR ISERLKTRGI 801 850 ENSP00000290573/1-917 FETKFLSQIE SDCLALLQVR AILQHLGLES TCDDSIIVKE VCTVVARRAA ENSBTAP00000053231/1-914 FETKFLSQIE SDCLALLQVR AILHHLGLES TCDDSIIVKE VCTVVARRAA ENSTTRP00000005874/1-896 FETKFLSQIE SDCLALLQVR AILHHLGLES TCDDSIIVKE VCTVVARRAA bmy_20083T0/1-891 FETKFLSQIE SDCLALLQVR AILHHLGLES TCDDSIIVKE VCTVVARRAA BACU010585/1-922 FETKFLSQIE SDCLALLQVR AILHHLGLES TCDDSIIVKE VCTVVARRAA 851 900 ENSP00000290573/1-917 QLCGAGMAAV VDRIRENRGL DALKVTVGVD GTLYKLHPHF AKVMHETVKD ENSBTAP00000053231/1-914 QLCGAGMAAV VDKIRENRGL DTLKVTVGVD GTLYKLHPHF AKVMHETVKD ENSTTRP00000005874/1-896 QLCGAGMAAV VDKIRENRGL DTLKVTVGVD GTLYKLHPHF AKVMHETVKD bmy_20083T0/1-891 QLCGAGMAAV VDKIRENRGL DTLKVTVGVD GTLYKLHPHF AKVMHETVKD BACU010585/1-922 QLCGAGMAAV VDKIRENRGL DTLKVTVGVD GTLYKLHPHF AKVMHETVKD 901 950 ENSP00000290573/1-917 LAPKCDVSFL QSEDGSGKGA ALITAVACRI REAGQR ENSBTAP00000053231/1-914 LAPKCDVSFL ESEDGSGKGA ALITAVACRI REAGQR ENSTTRP00000005874/1-896 LAPKCDVSFL ESEDGSGKGA ALITAVACRI REAGQR bmy_20083T0/1-891 LAPKCDVSFL ESEDGSGKGA ALITAVACRI REAGQR BACU010585/1-922 LAPKCDVSFL ESEDGSGKGA ALITAVACRI REAGQR