KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:06 2014 Check: 00 .. Name: BACU016051/1-1154 Len: 1157 Check: 1037 Weight: 1.00 Name: ENSP00000261722/1-1082 Len: 1157 Check: 3346 Weight: 1.00 Name: ENSBTAP00000053236/1-1085 Len: 1157 Check: 7738 Weight: 1.00 Name: bmy_18682T0/1-1085 Len: 1157 Check: 8435 Weight: 1.00 Name: ENSTTRP00000012353/1-1080 Len: 1157 Check: 8431 Weight: 1.00 // 1 50 BACU016051/1-1154 MSAAPAYSED KGGSAGPGEP EYGHDPASGG IFSSDYKRHD DLKEMLDTNK ENSP00000261722/1-1082 MSAAPAYSED KGGSAGPGEP EYGHDPASGG IFSSDYKRHD DLKEMLDTNK ENSBTAP00000053236/1-1085 MSAAPAYNED KGGSAGPGEP EYGHDPASGG IFSSDYKRHD DLKAMLDTNK bmy_18682T0/1-1085 MSAAPAYSED KGGSAGPGEP EYGHDPASGG IFSSDYKRHD DLKEMLDTNK ENSTTRP00000012353/1-1080 MSAAPAYSED -GGSAGPGEP EYGHDPASGG IFSSDYKRHD DVKEMLDTNK 51 100 BACU016051/1-1154 DSLKLEAMKR IVALASFFSP YLDPTTQMIA RGKNASDLFP AVVKNVACKN ENSP00000261722/1-1082 DSLKLEAMKR IVA------- -------MIA RGKNASDLFP AVVKNVACKN ENSBTAP00000053236/1-1085 DSLKLEAMKR IVA------- -------MIA RGKNASDLFP AVVKNVACKN bmy_18682T0/1-1085 DSLKLEAMKR IVA------- -------MIA RGKNASDLFP AVVKNVACKN ENSTTRP00000012353/1-1080 DSLKLEAMKR IVA------- -------MIA RGKNASDLFP AVVKNVACKN 101 150 BACU016051/1-1154 IEVKKLVYVY LVRYAEEQQD LALLSISTFQ RGLKDPNQLI RASALRVLSS ENSP00000261722/1-1082 IEVKKLVYVY LVRYAEEQQD LALLSISTFQ RGLKDPNQLI RASALRVLSS ENSBTAP00000053236/1-1085 IEVKKLVYVY LVRYAEEQQD LALLSISTFQ RGLKDPNQLI RASALRVLSS bmy_18682T0/1-1085 IEVKKLVYVY LVRYAEEQQD LALLSISTFQ RGLKDPNQLI RASALRVLSS ENSTTRP00000012353/1-1080 IEVKKLVYVY LVRYAEEQQD LALLSISTFQ RGLKDPNQLI RASALRVLSS 151 200 BACU016051/1-1154 IRVPIIVPIM MLAIKEAASD MSPYVRKTAA HAIPKLYSLD SDQKDQLIEV ENSP00000261722/1-1082 IRVPIIVPIM MLAIKEAASD MSPYVRKTAA HAIPKLYSLD SDQKDQLIEV ENSBTAP00000053236/1-1085 IRVPIIVPIM MLAIKEAASD MSPYVRKTAA HAIPKLYSLD SDQKDQLIEV bmy_18682T0/1-1085 IRVPIIVPIM MLAIKEAASD MSPYVRKTAA HAIPKLYSLD SDQKDQLIEV ENSTTRP00000012353/1-1080 IRVPIIVPIM MLAIKE-ASD MSPYVRKTAA HAIPKLYSLD SDQKDQLIEV 201 250 BACU016051/1-1154 IEKLLADKTT LVAGSVVMAF EEVCPERIDL IHKNYRKLCN LLIDVEEWGQ ENSP00000261722/1-1082 IEKLLADKTT LVAGSVVMAF EEVCPERIDL IHKNYRKLCN LLIDVEEWGQ ENSBTAP00000053236/1-1085 IEKLLADKTT LVAGSVVMAF EEVCPERIDL IHKNYRKLCN LLIDVEEWGQ bmy_18682T0/1-1085 IEKLLADKTT LVAGSVVMAF EEVCPERIDL IHKNYRKLCN LLIDVEEWGQ ENSTTRP00000012353/1-1080 IEKLLADKTT LVAGSVVMAF EEVCPERIDL IHKNYRKLCN LLIDVEEWGQ 251 300 BACU016051/1-1154 VVIISMLTRY ARTQFLSPTQ NESLLEENPE KAFYGSEEDE AKGPGLRPRP ENSP00000261722/1-1082 VVIISMLTRY ARTQFLSPTQ NESLLEENAE KAFYGSEEDE AKGAGSEETA ENSBTAP00000053236/1-1085 VVIISMLTRY ARTQFLSPTQ NESLLEENSE KAFYGSEEDE AKGPGSEEAA bmy_18682T0/1-1085 VVIISMLTRY ARTQFLSPTQ NESLLEENPE KAFYGSEEDE AKGPGSEAAA ENSTTRP00000012353/1-1080 VVIISMLTRY ARTQFLSPTQ NESLLEENPE KAFYGSEEDE AKGPGSEAAA 301 350 BACU016051/1-1154 ADAWGPARPP SPL-PRAPDT LRPSPPALRP DPSPALLPLV PSPHRSSPPS ENSP00000261722/1-1082 AAAA-PSRKP YVMDPDHRLL LRNTKPLLQS RSAAVVMAVA QL-------- ENSBTAP00000053236/1-1085 STAL-PARKP YVMDPDHRLL LRNTKPLLQS RSAAVVMAVA QL-------- bmy_18682T0/1-1085 STAL-PARKP YVMDPDHRLL LRNTKPLLQS RSAAVVMAVA QL-------- ENSTTRP00000012353/1-1080 STAV-PARKP YVMDPDHRLL LRNTKPLLQS RSAAVVMAVA QL-------- 351 400 BACU016051/1-1154 YSAHLPPILP TSLLPTCCPS RGAQVPLTPP LR--SEVQYV VLQNVATMSI ENSP00000261722/1-1082 -YFHLAPKAE VGVIAKA--- ------LVRL LRSHSEVQYV VLQNVATMSI ENSBTAP00000053236/1-1085 -YFHLAPKAE VGVIAKA--- ------LVRL LRSHSEVQYV VLQNVATMSI bmy_18682T0/1-1085 -YFHLAPKAE VGVIAKA--- ------LVRL LRSHSEVQYV VLQNVATMSI ENSTTRP00000012353/1-1080 -YFHLAPK-E VGVIAKA--- ------LVRL LRSHSEVQYV VLQNVATMSI 401 450 BACU016051/1-1154 KRRGMFEPYL KSFYIRSTDP TQIKILKLEV LTNLANETNI PTVLREFQTY ENSP00000261722/1-1082 KRRGMFEPYL KSFYIRSTDP TQIKILKLEV LTNLANETNI PTVLREFQTY ENSBTAP00000053236/1-1085 KRRGMFEPYL KSFYIRSTDP TQIKILKLEV LTNLANETNI PTVLREFQTY bmy_18682T0/1-1085 KRRGMFEPYL KSFYIRSTDP TQIKILKLEV LTNLANETNI PTVLREFQTY ENSTTRP00000012353/1-1080 KRRGMFEPYL KSFYIRSTDP TQ-KILKLEV LTNLANETNI PTVLREFQTY 451 500 BACU016051/1-1154 IRSMDKDFVA ATIQAIGRCA TNIGRVRDTC LNGLVQLLSN RDELVVAESV ENSP00000261722/1-1082 IRSMDKDFVA ATIQAIGRCA TNIGRVRDTC LNGLVQLLSN RDELVVAESV ENSBTAP00000053236/1-1085 IRSMDKDFVA ATIQAIGRCA TNIGRVRDTC LNGLVQLLSN RDELVVAESV bmy_18682T0/1-1085 IRSMDKDFVA ATIQAIGRCA TNIGRVRDTC LNGLVQLLSN RDELVVAESV ENSTTRP00000012353/1-1080 IRSMDKDFVA ATIQAIGRCA TNIGRVRDTC LNGLVQLLSN RDELVVAESV 501 550 BACU016051/1-1154 VVIKKLLQMQ PAQHGEIIKH LAKLTDNIQV PMARASILWL IGEYCEHVPR ENSP00000261722/1-1082 VVIKKLLQMQ PAQHGEIIKH LAKLTDNIQV PMARASILWL IGEYCEHVPR ENSBTAP00000053236/1-1085 VVIKKLLQMQ PAQHGEIIKH LAKLTDNIQV PMARASILWL IGEYCEHVPR bmy_18682T0/1-1085 VVIKKLLQMQ PAQHGEIIKH LAKLTDNIQV PMARASILWL IGEYCEHVPR ENSTTRP00000012353/1-1080 VVIKKLLQMQ PAQHGEIIKH LAKLTDNIQV PMARASILWL IGEYCEHVPR 551 600 BACU016051/1-1154 IAPDVLRKMA KSFTAEEDIV KLQVINLAAK LYLTNSKQTK LLTQYVLSLA ENSP00000261722/1-1082 IAPDVLRKMA KSFTAEEDIV KLQVINLAAK LYLTNSKQTK LLTQYVLSLA ENSBTAP00000053236/1-1085 IAPDVLRKMA KSFTAEEDIV KLQVINLAAK LYLTNSKQTK LLTQYVLSLA bmy_18682T0/1-1085 IAPDVLRKMA KSFTAEEDIV KLQVINLAAK LYLTNSKQTK LLTQYVLSLA ENSTTRP00000012353/1-1080 IAPDVLRKMA KSFTAEEDIV KLQVINLAAK LYLTNSKQTK LLTQYVLSLA 601 650 BACU016051/1-1154 KYDQNYDIRD RARFTRQLIV PSEQGGALSR HAKKLFLAPK PAPVLESSFK ENSP00000261722/1-1082 KYDQNYDIRD RARFTRQLIV PSEQGGALSR HAKKLFLAPK PAPVLESSFK ENSBTAP00000053236/1-1085 KYDQNYDIRD RARFTRQLIV PSEQGGALSR HAKKLFLAPK PAPVLESSFK bmy_18682T0/1-1085 KYDQNYDIRD RARFTRQLIV PSEQGGALSR HAKKLFLAPK PAPVLESSFK ENSTTRP00000012353/1-1080 KYDQNYDIRD RARFTRQLIV PSEQGGALSR HAKKLFLAPK PAPVLESSFK 651 700 BACU016051/1-1154 DRDHFQLGSL SHLLNAKATG YQELPDWPEE APDPSVRNVE VPEWTKCSNR ENSP00000261722/1-1082 DRDHFQLGSL SHLLNAKATG YQELPDWPEE APDPSVRNVE VPEWTKCSNR ENSBTAP00000053236/1-1085 DRDHFQLGSL SHLLNAKATG YQELPDWPEE APDPSVRNVE VPEWTKCSNR bmy_18682T0/1-1085 DRDHFQLGSL SHLLNAKATG YQELPDWPEE APDPSVRNVE VPEWTKCSNR ENSTTRP00000012353/1-1080 DRDHFQLGSL SHLLNAKATG YQELPDWPEE APDPSVRNVE V-EWTKCSNR 701 750 BACU016051/1-1154 EKRKEKEKPF YSDSEGESGP TESADSDPES ESESDSKSSS ESGSGESSSE ENSP00000261722/1-1082 EKRKEKEKPF YSDSEGESGP TESADSDPES ESESDSKSSS ESGSGESSSE ENSBTAP00000053236/1-1085 EKRKEKEKPF YSDSEGESGP TESADSDPES ESESESKSSS ESGSGESSSE bmy_18682T0/1-1085 EKRKEKEKPF YSDSEGESGP TESADSDPES ESESDSKSSS ESGSGESSSE ENSTTRP00000012353/1-1080 EKRKEKEKPF YSDSEGESGP TESADSDPES ESESDSKSSS ESGSGESSSE 751 800 BACU016051/1-1154 SDNKGQDEDE EKGRSSESEH SEEEGKKRKM KKRKKVPEGQ EGGSSSDEGS ENSP00000261722/1-1082 SDNEDQDEDE EKGRGSESEQ SEEDGKR--- KTKKKVPERK GEASSSDEGS ENSBTAP00000053236/1-1085 SDNEDQEEDE EKGRSSESEQ SEEEGKKKKM KKRKKVPEGQ EGGLSSDEGS bmy_18682T0/1-1085 SDNKGQDEDE EKGRSSESEH SEEEGKKRKM KKRKKVPEGQ EGGSFSDEGS ENSTTRP00000012353/1-1080 SDNKDQDEDE EKGRSSESEH SEEEGKKRKM KKRKKEPEGQ EGGSSSEEGS 801 850 BACU016051/1-1154 DSSSSSSESE MTSETEEEQV EPASWRKKTP PSSKSAPAAK EISLLDLEDF ENSP00000261722/1-1082 DSSSSSSESE MTSESEEEQL EPASWSRKTP PSSKSAPATK EISLLDLEDF ENSBTAP00000053236/1-1085 DSSSSSSESE MTSETEEEQV EPASWRKKTP PSSKSAPAAK EVSLLDLEDF bmy_18682T0/1-1085 DSSSSSSESE MTSETEEEQV EPASWRKQTP PSSKSAPAAK EISLLDLEDF ENSTTRP00000012353/1-1080 DSSSSSSESE MTSETEEEQA EPASWRKKTP PSSKSAPAAK EISLLDLEDF 851 900 BACU016051/1-1154 TPPSVQPVSP PTVVSTSLAA DLEGLTLTDS PLVPSLLSPV LGVGRQELLH ENSP00000261722/1-1082 TPPSVQPVSP PAIVSTSLAA DLEGLTLTDS TLVPSLLSPV SGVGRQELLH ENSBTAP00000053236/1-1085 TPASVQPVSP PTVVSTSLAA DLEGLTLTDS PLVPSLLSPV SGAGRQELLH bmy_18682T0/1-1085 TPPSVQPVSP PTVVSTSLAA DLEGLTLTDS PLVPSLLSPV LGVGRQELLH ENSTTRP00000012353/1-1080 TPPSVQPVSP PTVVSTSLAA DLEGLTLTDS PLVPSLLSPV LGVGRQELLH 901 950 BACU016051/1-1154 RVAGEGLAVD YTFSRQPFSG DPHMVAVHIH FSNSSDTPIK GLHVGTPKLP ENSP00000261722/1-1082 RVAGEGLAVD YTFSRQPFSG DPHMVSVHIH FSNSSDTPIK GLHVGTPKLP ENSBTAP00000053236/1-1085 RVAGEGLAVD YTFSRQPFSG DPHMVSVHIH FSNSSDTPIK ALHLGTPKLP bmy_18682T0/1-1085 RVAGEGLAVD YTFSRQPFSG DPHMVAVHIH FSNSSDTPIK GLXVGTPKLP ENSTTRP00000012353/1-1080 RVAGEGLVVD YTFSRQPFSG DPHMVSVHIH FSNSSDTPIK GLHVGTPKLP 951 1000 BACU016051/1-1154 AGISIQEFPE IESLAPGESA TAVMGINFCD STQAANFQLC TQTRQFYVSI ENSP00000261722/1-1082 AGISIQEFPE IESLAPGESA TAVMGINFCD STQAANFQLC TQTRQFYVSI ENSBTAP00000053236/1-1085 PGISIQEFPE IESLAPGESA TVVMGINFCD STQAANFQLC TQTRQFYVSI bmy_18682T0/1-1085 AGISIQEFPE IESLAPGESA TAVMGINFCD STQAANFQLC TQTRQFYVSI ENSTTRP00000012353/1-1080 AGISIQEFPE IESLAPGESA TAVMGINFCD STQAANFQLC TQTRQFYVSI 1001 1050 BACU016051/1-1154 QPPVGELMAP VFMSENEFKK EQGKLTGMNE ITEKLTLPDT CRSDHVVVQK ENSP00000261722/1-1082 QPPVGELMAP VFMSENEFKK EQGKLMGMNE ITEKLMLPDT CRSDHIVVQK ENSBTAP00000053236/1-1085 QPPVGELMAP VFLSENEFKK EQAKLTGMNE ITEKLTLPDT CRSDHVVVQK bmy_18682T0/1-1085 QPPVGELMAP VFMSENEFKK EQGKLTGMNE ITEKLTLPDT CRSDHVVVQK ENSTTRP00000012353/1-1080 QPPVGELMAP VFMSENEFKK EQGKLSGMNE ITEKLTLPDT CRSDHVVVQK 1051 1100 BACU016051/1-1154 VTATANLGRV PCGTSDEYRF AGRTLTSGSL VLLTLDAQPT GAAQLTVNSE ENSP00000261722/1-1082 VTATANLGRV PCGTSDEYRF AGRTLTGGSL VLLTLDARPA GAAQLTVNSE ENSBTAP00000053236/1-1085 VTATANLGRV PCGTSDEYRF AGRTLTSGSL VLLTLDARPT GAAQLTVNSE bmy_18682T0/1-1085 VTATANLGRV PCGTSDEYRF AGRTLTSGSL VLLTLDAQPT GAAQLTVNSE ENSTTRP00000012353/1-1080 VTATANLGRV PCGTSDEYRF AGRTLTSGSL VLLTLDAQPT GAAQLTVNSE 1101 1150 BACU016051/1-1154 KMVIGTMLVK DVVQALTQSM AEPSTALPRR HPRVSLCRDK TGPARNTLVE ENSP00000261722/1-1082 KMVIGTMLVK DVIQALTQ-- ---------- ---------- ---------- ENSBTAP00000053236/1-1085 KMVIGTMLVK DVVQALTQ-- ---------- ---------- ---------- bmy_18682T0/1-1085 KMVIGTMLVK DVVQALTQ-- ---------- ---------- ---------- ENSTTRP00000012353/1-1080 KMVIGTMLVK DVVQALTQ-- ---------- ---------- ---------- 1151 1200 BACU016051/1-1154 TDQTYRT ENSP00000261722/1-1082 ------- ENSBTAP00000053236/1-1085 ------- bmy_18682T0/1-1085 ------- ENSTTRP00000012353/1-1080 -------