KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:07 2014 Check: 00 .. Name: bmy_05191T0/1-475 Len: 481 Check: 9603 Weight: 1.00 Name: BACU019559/1-381 Len: 481 Check: 3083 Weight: 1.00 Name: ENSP00000363349/1-437 Len: 481 Check: 7233 Weight: 1.00 Name: ENSTTRP00000008815/1-385 Len: 481 Check: 6872 Weight: 1.00 Name: ENSBTAP00000053240/1-389 Len: 481 Check: 6825 Weight: 1.00 // 1 50 bmy_05191T0/1-475 MSGGPPKALP STGPHSLRDM PHPLAGSSSE EAVGGDSTPS PDLLTARSFG BACU019559/1-381 ---------- ---------- ---------- ---------- -----MILFF ENSP00000363349/1-437 MAGGPPKALP STGPHSLRDM PHPLAGSSSE EAVGGDSTPS PDLLMARSFG ENSTTRP00000008815/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053240/1-389 ---------- ---------- ---------- ---------- --------FF 51 100 bmy_05191T0/1-475 DK---MCHLH LELTDMTARL TSHFL--LQL DDDIDGETRD LFVTVDDPKK BACU019559/1-381 LQDLILPNGG TPAGPASPAS SSSLLNRLQL DDDIDGETRD LFVTVDDPKK ENSP00000363349/1-437 DKDLILPNGG TPAGTSSPAS SSSLLNRLQL DDDIDGETRD LFVIVDDPKK ENSTTRP00000008815/1-385 --DLILPNGG TPAGPASPAS SSSLLNRLQL DDDIDGETRD LFVTVDDPKK ENSBTAP00000053240/1-389 PQDLILPNGG TPAGTASPAS SSSLLNRLQL DDDMDGETRD LFVTVDDPKK 101 150 bmy_05191T0/1-475 HVCTMETYIT YRITTKSTRV EFDLPEYSVR RRYQDFDWLR NKLEESQPTH BACU019559/1-381 HVCTMETYIT YRITTKSTRV EFDLPEYSVR RRYQDFDWLR NKLEESQPTH ENSP00000363349/1-437 HVCTMETYIT YRITTKSTRV EFDLPEYSVR RRYQDFDWLR SKLEESQPTH ENSTTRP00000008815/1-385 HVCTMETYIT YRITTKSTRV EFDLPEYSVR RRYQDFDWLR NKLEESQPTH ENSBTAP00000053240/1-389 HVCTMETYIT YRITTKSTRV EFDLPEYSVR RRYQDFDWLR NKLEESQPTH 151 200 bmy_05191T0/1-475 LIPPLPEKFV VKGVVDRFSE EFVETRRKAL DKFLKRITDH PVLSFNEHFN BACU019559/1-381 LIPPLPEKFV VKGVVDRFSE EFVETRRKAL DKFLKRITDH PVLSFNEHFN ENSP00000363349/1-437 LIPPLPEKFV VKGVVDRFSE EFVETRRKAL DKFLKRITDH PVLSFNEHFN ENSTTRP00000008815/1-385 LIPPLPEKFV VKGVVDRFSE EFVETRRKAL DKFLKRITDH PVLSFNEHFN ENSBTAP00000053240/1-389 LIPPLPEKFV VKGVVDRFSE EFVETRRKAL DKFLKRITDH PVLSFNEHFN 201 250 bmy_05191T0/1-475 VFLTAKDLNA HKKQGMALLT RVGESVKHVT GGYKLRSRPL EFAAIGEYLD BACU019559/1-381 VFLTAKDLNA HKKQGMALLT RVGESVKHVT GGYKLRSRPL EFAAIGEYLD ENSP00000363349/1-437 IFLTAKDLNA YKKQGIALLT RMGESVKHVT GGYKLRTRPL EFAAIGDYLD ENSTTRP00000008815/1-385 VFLTAXDLNA HKKQGMALLT RVGESVKHVT GGYKLRSRPL EFAAIGEYLD ENSBTAP00000053240/1-389 VFLTAKDLNA HKKQGMALLT RVGESVKHVA GGYKLRNRPL EFAAIGEYLD 251 300 bmy_05191T0/1-475 TFALKLGTID RIAQRIIKEE IEYLVELREY GPVYSTWSAL EGELAEPLEG BACU019559/1-381 TFALKLGTID RIAQRIIKEE IEYLVELREY GPVYSTWSAL EGELAEPLEG ENSP00000363349/1-437 TFALKLGTID RIAQRIIKEE IEYLVELREY GPVYSTWSAL EGELAEPLEG ENSTTRP00000008815/1-385 TFALKLGTID RIAQRIIKEE IEYLVELREY GPVYSTWSAL EGELAEPLEG ENSBTAP00000053240/1-389 TFALKLGTID RIAQRIIKEE IEYLVELREY GPVYSTWSAL EGELAEPLEG 301 350 bmy_05191T0/1-475 VSACIGNCST ALEELTEDMT EDFLPVLREY ILYSDSMKSV LKKRDQVQAE BACU019559/1-381 VSACIGNCST ALEELTEDMT EDFLPVLREY ILYSDSMKTS QKERNSPRTW ENSP00000363349/1-437 VSACIGNCST ALEELTDDMT EDFLPVLREY ILYSDSMKSV LKKRDQVQAE ENSTTRP00000008815/1-385 VSACIGNCST ALEELTEDMT EDFLPVLREY ILYSDCMKSV LKKRDQVQAE ENSBTAP00000053240/1-389 VSACIGNCST ALEELTDDMT EDFLPVLREY ILYSDSMKSV LKKRDQVQAE 351 400 bmy_05191T0/1-475 YEAKLEAVAL RKEERP-KVP ADVEKCQDRM ECFNADLKAD MERWQNSKRQ BACU019559/1-381 VGQKKKEVTA PVYASPFQVP ADVEKCQDRM ECFNADLKAD MERWQNSKRQ ENSP00000363349/1-437 YEAKLEAVAL RKEDRP-KVP ADVEKCQDRM ECFNADLKAD MERWQNNKRQ ENSTTRP00000008815/1-385 YEAKLEAVAL RKEERP-KVP ANVEKCQDRM ECFNADLKAD MERWQNSKRQ ENSBTAP00000053240/1-389 YETKLEAVAL KKEERP-KVP ADVEKCQDRM ECFNADLKAD MERWQNNKRQ 401 450 bmy_05191T0/1-475 DFRQLLMGMA DKNIQYYEKL KVIDEEWPNV VFNEYLFLGG VCKAVIISQQ BACU019559/1-381 DFRQLLMGMA DKNIQYYEKV M-------SR L--------- ---------- ENSP00000363349/1-437 DFRQLLMGMA DKNIQYYEKC LM---AWESI I--------- ---------- ENSTTRP00000008815/1-385 DFRQLLMGMA DKNIQYYEKC LM---AWESI I--------- ---------- ENSBTAP00000053240/1-389 DFRQLLMGMA DKNIQYYEKC LM---AWESI I--------- ---------- 451 500 bmy_05191T0/1-475 KKHTSVVXRN LFGGTLRRFE TEGQDSPQLT F BACU019559/1-381 ---------- ----TL---- ---------- - ENSP00000363349/1-437 ---------- ----PLLQEK QEAK------ - ENSTTRP00000008815/1-385 ---------- ----PLLQEK QEAK------ - ENSBTAP00000053240/1-389 ---------- ----PLLQEK QEAK------ -