KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:11 2014 Check: 00 .. Name: ENSP00000402861/1-1095 Len: 1096 Check: 3355 Weight: 1.00 Name: bmy_12048T0/1-901 Len: 1096 Check: 6868 Weight: 1.00 Name: ENSBTAP00000053252/1-1096 Len: 1096 Check: 6036 Weight: 1.00 Name: BACU014113/1-997 Len: 1096 Check: 9095 Weight: 1.00 Name: ENSTTRP00000005347/1-1015 Len: 1096 Check: 9407 Weight: 1.00 // 1 50 ENSP00000402861/1-1095 MAEGAAGRED PAPPDAAGGE DDPRVGPDA- AGDCVTAASG GRMRDRRSGV bmy_12048T0/1-901 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053252/1-1096 MAEGAASREG SAPPDAAGSE DDPRVGPDAT SGDCVAAAPG GRWRDRRSGV BACU014113/1-997 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005347/1-1015 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000402861/1-1095 ALPGAAGTPA DSEAGLLEAA RATPRRSSII KDPSNQKCGG RKKTVSFSSM bmy_12048T0/1-901 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000053252/1-1096 ALPGAAGPPA DSEAALLEAA RATPRRSSII KDPANQKCGG RKKTVSFSSM BACU014113/1-997 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000005347/1-1015 ---------- ---------- ---------- -DPANQKCGG RKKTVSFSSM 101 150 ENSP00000402861/1-1095 PSEKKISSAN DCISFMQAGC ELKKVRPNSR IYNRFFTLDT DLQALRWEPS bmy_12048T0/1-901 PSEKKISSAS DCISFMQAGC ELKKVRPNSR IYNRFFTLDT DLQALRWEPS ENSBTAP00000053252/1-1096 PSEKKISSAS DCITFMQAGC ELKKVRPNSR IYNRFFTLDT DLQALRWEPS BACU014113/1-997 PSEKKISSAS DCISFMQAGC ELKKVRPNSR IYNRFFTLDT DLQALRWEPS ENSTTRP00000005347/1-1015 PSEKKISSAS DCISFMQAGC ELKKVRPNSR IYNRFFTLDT DLQALRWEPS 151 200 ENSP00000402861/1-1095 KKDLEKAKLD ISAIKEIRLG KNTETFRNNG LADQICEDCA FSILHGENYE bmy_12048T0/1-901 KKDLEKAKLD ISAIKEIRLG KNTETFRNNG LADQICEDCA FSILHGENYE ENSBTAP00000053252/1-1096 KKDLEKAKLD ISAIKEIRLG KNTETFRNNG LADQICEDCA FSILHGENYE BACU014113/1-997 KKDLEKAKLD ISAIKEIRLG KNTETFRNNG LADQICEDCA FSILHGENYE ENSTTRP00000005347/1-1015 KKDLEKAKLD ISAIKEIRLG KNTETFRNNG LADQICEDCA FSILHGENYE 201 250 ENSP00000402861/1-1095 SLDLVANSAD VANIWVSGLR YLVSRSKQPL DFMEGNQNTP RFMWLKTVFE bmy_12048T0/1-901 SLDLVANSAD VANIWVSGLR YLVSRSKQPL DFMEGNQNTP RFMWLKKVFE ENSBTAP00000053252/1-1096 SLDLVANSAD VANIWVSGLR YLVSRSKQPL DFMEGNQNTP RFMWLKTVFE BACU014113/1-997 SLDLVANSAD VANIWVSGLR YLVSRSKQPL DFMEGNQNTP RFMWLKKVFE ENSTTRP00000005347/1-1015 SLDLVANSAD VANIWVSGLR YLVSRSKQPL DFMEGNQNTP RFMWLKKVFE 251 300 ENSP00000402861/1-1095 AADVDGNGIM LEDTSVELIK QLNPTLKEAK IRLKFKEIQK SKEKLTTRVT bmy_12048T0/1-901 AADIDGNGIM LEDTSVELIK QLNPTLKESK IRLKFKEIQK SKEKLTTRVT ENSBTAP00000053252/1-1096 AADIDGNGIM LEDTSVELIK QLNPTLKESK IRLKFKEIQK SKEKLTTRVT BACU014113/1-997 AADIDGNGIM LEDTSVELIK QLNPTLKESK IRLKFKEIQK SKEKLTTRVT ENSTTRP00000005347/1-1015 AADIDGNGIM LEDTSVELIK QLNPTLKESK IRLKFKEIQK SKEKLTTRVT 301 350 ENSP00000402861/1-1095 EEEFCEAFCE LCTRPEVYFL LVQISKNKEY LDANDLMLFL EAEQGVTHIT bmy_12048T0/1-901 EEEFCEAFCE LCTRPEVYFL LVQISKNKEY LDANDLMLFL EAEQGVTQIT ENSBTAP00000053252/1-1096 EEEFCEAFCE LCTRPEVYFL LVQISKNKEY LDANDLMLFL EAEQGVTHIT BACU014113/1-997 EEEFCEAFCE LCTRPEVYFL LVQISKNKEY LDANDLMLFL EAEQGVTQIT ENSTTRP00000005347/1-1015 EEEFCEAFCE LCTRPEVYFL LVQISKNKEY LDANDLMLFL EAEQGVTHIT 351 400 ENSP00000402861/1-1095 EDICLDIIRR YELSEEGRQK GFLAIDGFTQ YLLSSECDIF DPEQKKVAQD bmy_12048T0/1-901 EDMCLDIIRR YELSEEGRQK GFLAIDGFTQ YLLSPECDIF DPEQKKVAQD ENSBTAP00000053252/1-1096 EDMCLDIIRR YELSEEGRQK GFLAIDGFTQ YLLSSECNIF DPEQSKVAQD BACU014113/1-997 EDMCLDIIRR YELSEEGRQK GFLAIDGFTQ YLLSPECDIF DPEQKKVAQD ENSTTRP00000005347/1-1015 EDMCLDIIRR YELSEEGRQK GFLAIDGFTQ YLLSPECDIF DPEQKKVAQD 401 450 ENSP00000402861/1-1095 MTQPLSHYYI NASHNTYLIE DQFRGPADIN GYIRALKMGC RSVELDVSDG bmy_12048T0/1-901 MTQPLSHYYI NASHNTYLIE DQFRGPADIN GYVRALKMGC RSIELDVNDG ENSBTAP00000053252/1-1096 MTQPLSHYYI NASHNTYLIE DQFRGPADIN GYVRALKMGC RSIELDVNDG BACU014113/1-997 MTQPLSHYYI NASHNTYLIE DQFRGPADIN GYVRALKMGC RSIELDVNDG ENSTTRP00000005347/1-1015 MTQPLSHYYI NASHNTYLIE DQFRGPADIN GYVRALKMGC RSIELDVNDG 451 500 ENSP00000402861/1-1095 SDNEPILCNR NNMTTHVSFR SVIEVINKFA FVASEYPLIL CLGNHCSLPQ bmy_12048T0/1-901 SDNEPILCNR NNMTTHLSFR SVIEVINKFA FVASEYPLIL CLGNHCSLPQ ENSBTAP00000053252/1-1096 SDNEPILCNR NNMTTHLSFR SVIEVINKFA FVASEYPLIL CLGNHCSLPQ BACU014113/1-997 SDNEPILCNR NNMTTHLSFR SVIEVINKFA FVASEYPLIL CLGNHCSLPQ ENSTTRP00000005347/1-1015 SDNEPILCNR NNMTTHLSFR SVIEVINKFA FVASEYPLIL CLGNHCSLPQ 501 550 ENSP00000402861/1-1095 QKVMAQQMKK VFGNKLYTEA PLPSESYLPS PEKLKRMIIV KGKKLPSDPD bmy_12048T0/1-901 QKVMVQQMKK VFGSKLYTEA PLPSESYLPS PEKLKRMIIV KGKKLPSDPD ENSBTAP00000053252/1-1096 QKVMVQQMKK VFGSKLYTEA PLLSESYLPS PEKLKRMIIV KGKKLPSDTD BACU014113/1-997 QKVMVQQMKK VFGSKLYTEA PLPSESYLPS PEKLKRMIIV KGKKLPSDPD ENSTTRP00000005347/1-1015 QKVMVQQMKK VFGSKLYTEA PLPSESYLPS PEKLKRMIIV KGKKLPSDPD 551 600 ENSP00000402861/1-1095 VLEGEVTDED EEAEMSRRMS VDYNGEQKQI RLCRELSDLV SICKSVQYRD bmy_12048T0/1-901 VLEGEVTDED EEAEMSRRMS VDYNGEQKQI LLCRELSDLV SICKSVQYRD ENSBTAP00000053252/1-1096 VLEGEVTDED EEAEMSRRMS VDYNGEQKQI LLCRELSDLV SICKSVQYRD BACU014113/1-997 VLEGEVTDED EEAEMSRRMS VDYNGEQKQI LLCRELSDLV SICKSVQYRD ENSTTRP00000005347/1-1015 VLEGEVTDED EEAEMSRRMS VDYNGEQKQI LLCRELSDLV SICKSVQYRD 601 650 ENSP00000402861/1-1095 FELSMKSQNY WEMCSFSETE ASRIANEYPE DFVNYNKKFL SRIYPSAMRI bmy_12048T0/1-901 FELSMKSQNY WEICSFSETE ASRIANEYPE DFVNYNKKFL SRIYPSAMRI ENSBTAP00000053252/1-1096 FELSMKSQNY WEICSFSETE ASRIANEYPE DFVNYNKKFL SRIYPSAMRI BACU014113/1-997 FELSMKSQNY WEICSFSETE ASRIANEYPE DFVNYNKKFL SRIYPSAMRI ENSTTRP00000005347/1-1015 FELSMKSQNY WEICSFSETE ASRIANEYPE DFVNYNKKFL SRIYPNAMRI 651 700 ENSP00000402861/1-1095 DSSNLNPQDF WNCGCQIVAM NFQTPGPMMD LHTGWFLQNG GCGYVLRPSI bmy_12048T0/1-901 DSSNLNPQDF WNCGCQIVAM NFQTPGPMMD LHTGWFLQNG GCGYVLRPSI ENSBTAP00000053252/1-1096 DSSNLNPQDF WNCGCQIVAM NFQTPGPMMD LHTGWFLQNG GCGYVLRPSI BACU014113/1-997 DSSNLNPQDF WNCGCQIVAM NFQTPGPMMD LHTGWFLQNG GCGYVLRPSI ENSTTRP00000005347/1-1015 DSSNLNPQDF WNCGCQIVAM NFQTPGPMMD LHTGWFLQNG GCGYVLRPSI 701 750 ENSP00000402861/1-1095 MRDEVSYFSA NTKGILPGVS PLALHIKIIS GQNFPKPKGA CAKGDVIDPY bmy_12048T0/1-901 MRDEVSYFSA NTKGIVPGVS PLVLHIKIIS GQNFPKPKGA CAKGDVIDPY ENSBTAP00000053252/1-1096 MRDEVSYFSA NTKGIVPGVS PLVLHIKIIS GQNFPKPKGA CAKGDVIDPY BACU014113/1-997 MRDEVSYFSA NTKGIVPGVS PLVLHIKIIS GQNFPKPKGA CAKGDVIDPY ENSTTRP00000005347/1-1015 MRDEVSYFSA NTKGIVPGVS PLVLHIKIIS GQNFPKPKGA CAKGDVIDPY 751 800 ENSP00000402861/1-1095 VCIEIHGIPA DCSEQRTKTV QQNSDNPIFD ETFEFQVNLP ELAMIRFVVL bmy_12048T0/1-901 VCIEIHGIPA DCSEQRTKTV QQNSDNPIFD ETFEFQVNLP ELAVIRFVVL ENSBTAP00000053252/1-1096 VCIEIHGIPA DCSEQRTKTV QQNSDNPIFD ETFEFQVNLP ELAMIRFVVL BACU014113/1-997 VCIEIHGIPA DCSEQRTKTV QQNSDNPIFD ETFEFQVNLP ELAVIRFVVL ENSTTRP00000005347/1-1015 VCIEIHGIPA DCSEQRTKTV QQNSDNPIFD ETFEFQVNLP ELAMIRFVVL 801 850 ENSP00000402861/1-1095 DDDYIGDEFI GQYTIPFECL QPGYRHVPLR SFVGDIMEHV TLFVHIAITN bmy_12048T0/1-901 DDDYIGDEFI GQYTIPFECL QPGYRHVPLR SFVGDIMEHV TLFVHIAITN ENSBTAP00000053252/1-1096 DDDYIGDEFI GQYTIPFECL QPGYRHVPLR SFVGDIMEHV TLFVHIAITN BACU014113/1-997 DDDYIGDEFI GQYTIPFECL QPGYRHVPLR SFVGDVMEHV TLFVHIAITN ENSTTRP00000005347/1-1015 DDDYIGDEFI GQYTIPFECL QPGYRHVPLR SFVGDIMEHV TLFVHIAITN 851 900 ENSP00000402861/1-1095 RSGGGKAQKR SLSVRMGKKV REYTMLRNIG LKTIDDIFKI AVHPLREAID bmy_12048T0/1-901 RSGGGKPQKR SLSVRMGKKV REYTMLRNIG LKTIDDIFKI AVHPLREAID ENSBTAP00000053252/1-1096 RSGGGKPQKR SLSVRMGKKV RECTMLRNIG LKNIDDIFKV AVHPLREAID BACU014113/1-997 RSGGGKPQKR SLSVRMGKKV REYTMLRNIG LKTIDDIFKI AVHPLREAID ENSTTRP00000005347/1-1015 RSGGGKPQKR SLSVRMGKKV REYTMLRNIG LKTIDDIFKL AVHPLREAID 901 950 ENSP00000402861/1-1095 MRENMQNAIV SIKELCGLPP IASLKQCLLT LSSRLITSDN TPSVSLVMKD bmy_12048T0/1-901 MRENMQNAIV SVKELCGLPP IASLKQCLLT LSSRLITSDN TPSVSLVMKD ENSBTAP00000053252/1-1096 MRENMQNAIV SVKELCGLPP IASLKQCLLT LSSRLITSDN TPSVSLVMKD BACU014113/1-997 MRENMQNAIV SVKELCGLPP IASLKQCLLT LSSRLITSDN TPSVSLVMKD ENSTTRP00000005347/1-1015 MRENMQNAIV SVKELCGLPP IASLKQCLLT LSSRLITSDN TPSVSLVMKD 951 1000 ENSP00000402861/1-1095 SFPYLEPLGA IPDVQKKMLT AYDLMIQESR FLIEMADTVQ EKIVQCQKAG bmy_12048T0/1-901 NFPHLEPLGA IPDVQKKMLA AYDL------ ---------- ---------- ENSBTAP00000053252/1-1096 NFPYLEPLGA IPDMQKKMLA AYDLMIQESR FLIEMADTVQ EKIVQCQKAG BACU014113/1-997 NFPHLEPLGA IPDVQKKMLA AYDLMIQESR FLIEMADTVQ EKIVQCQKAG ENSTTRP00000005347/1-1015 NFPHLEPLGA IPDVQKKMLA AYDLMIQESR FLIEMADTVQ EKIVQCQKAG 1001 1050 ENSP00000402861/1-1095 MEFHEELHNL GAKEGLKGRK LNKATESFAW NITVLKGQGD LLKNAKNEAI bmy_12048T0/1-901 ---------- ---------- ---------- ---------- ---------V ENSBTAP00000053252/1-1096 MEFHEELHNL GAKEGLKGRK LNKATESFAW NITVLKGQGD LLKNAKNEAI BACU014113/1-997 MEFHEELHNL GAKEGLKGRK LNKATESFAW NITVLKGQGD LLKNAKNEAI ENSTTRP00000005347/1-1015 MEFHEELHNL GAKEGLKGRK LNKATESFAW NITVLKGQGD LLKNAKNEAI 1051 1100 ENSP00000402861/1-1095 ENMKQIQLAC LSCGLSKAPS SSAEAKSKRS LEAIEEKESS EENGKL bmy_12048T0/1-901 GNCYSLFFLC V-----RRKS YG-----RGS FVELQ----- ------ ENSBTAP00000053252/1-1096 ENMKQIQLAC LSCGLSKAPS SGAEVKSKRS LEAIEEKESC EDNGKL BACU014113/1-997 ENMKQIQLAC LSCGLSKAPS SGAEAKSKRS LEAIEEKESS EDNGKL ENSTTRP00000005347/1-1015 ENMKQIQLAC LSCGLSKAPS SGAEAKSKRS LEAIEEKESS EDNGKL