KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:35 2014 Check: 00 .. Name: BACU011549/1-109 Len: 310 Check: 9358 Weight: 1.00 Name: ENSP00000341543/1-190 Len: 310 Check: 6803 Weight: 1.00 Name: bmy_21938T0/1-279 Len: 310 Check: 87 Weight: 1.00 Name: ENSTTRP00000001613/1-296 Len: 310 Check: 5365 Weight: 1.00 Name: ENSBTAP00000053324/1-190 Len: 310 Check: 8148 Weight: 1.00 // 1 50 BACU011549/1-109 ---------- ---------- ---------- ---------- ---------- ENSP00000341543/1-190 ---------- ---------- ---------- ---------- ---------- bmy_21938T0/1-279 MLGRSRRSRH HLAAAPPLPH PFPLG----- ---------- -----SLATR ENSTTRP00000001613/1-296 LRASVSRWPG FGSVLATWPF RRPRGAYPLL PSGSTTTWSE SSRACSLAAR ENSBTAP00000053324/1-190 ---------- ---------- ---------- ---------- ---------- 51 100 BACU011549/1-109 ---------- ---------- ---------- ---------- ---------- ENSP00000341543/1-190 ---------- ---------- ---------- ---------- ---------- bmy_21938T0/1-279 RPPLLPACPG ATDSPPTERG LRGHVVRAKR FRFSEEPGLG AEGAVLEVRV ENSTTRP00000001613/1-296 RPPLLPACRG ATDSPPTERG LRGHVVRAKR FRFSEEPGLG AEGAVLEVRV ENSBTAP00000053324/1-190 ---------- ---------- ---------- ---------- ---------- 101 150 BACU011549/1-109 ---------- ---------- ---------- ---------- ---------- ENSP00000341543/1-190 ---------M YVWPCAVVLA QYLWFHRRSL PGKAILEIGA GVSLPGILAA bmy_21938T0/1-279 PQVLHLQYGM YVWPCAVVLA QYLWFHRGSL PGKAVLEIGA GVSLPGIMAA ENSTTRP00000001613/1-296 PQVLHLQYGM YVWPCAVVLA QYLWFHRGSL PGKAVLE--A GVSLPGIMAA ENSBTAP00000053324/1-190 ---------M YVWPCAVVLA QYLWFHRGSL PGKAVLEIGA GVSLPGIVAA 151 200 BACU011549/1-109 ---------- ---------- ------MNNL PQVHVVGLTW GHVSRDLLAL ENSP00000341543/1-190 KCGAEVILSD SSELPHCLEV CRQSCQMNNL PHLQVVGLTW GHISWDLLAL bmy_21938T0/1-279 KCGAEVILSD SSELPHCLEI CRQSCQMNNL PQVHVVGLTW GHVSRDLLAL ENSTTRP00000001613/1-296 KCGAEVTLSD -SELPHCLEI CRQSCQMNNL PQVHVVGLTW GHVSRDLLAL ENSBTAP00000053324/1-190 KCGAEVTLSD SSELPHCLAI CRESCQMNNL PQVHVVGLTW GHVSRDLLAL 201 250 BACU011549/1-109 PPQDIILASD VFFEPEGDLG GLLDRDLDLD SLLDTGGGLL DRDLDLD--- ENSP00000341543/1-190 PPQDIILASD VFFEPE---- -------DFE DILATIYFLM HKNPKVQLWS bmy_21938T0/1-279 PPQDIILASD VFFEPE---- -------DFE DILTTVYFLM QKNPKVQLWS ENSTTRP00000001613/1-296 PPQDIILASD VFFEPE---- -------DFE DILTTVYFLM QKNPKVQLWS ENSBTAP00000053324/1-190 PPQDIILASD VFFEPE---- -------DFE DILTTVYFLM QKNPKVKLWS 251 300 BACU011549/1-109 ----RERDLE TDED-FDLDL RA-DLDLE-V DRDLERVRDR DL-------- ENSP00000341543/1-190 TYQVRSADWS LEALLYKWDM KCVHIPLESF DADKEDIAES TLPGRHTVEM bmy_21938T0/1-279 TYQVRSADWS LEALLYKWDM KCVHIPLESF GADKEDIAES ALPGRHTVEM ENSTTRP00000001613/1-296 TYQVRSADWS LEALLYKWDM KCVHIPLESF GADKEDIAES ALPGRHTVEM ENSBTAP00000053324/1-190 TYQVRSADWS LEALLYKWDM KCVHIPLESF GADKEDIAES ALPGRHTVEM 301 350 BACU011549/1-109 -------ERL ENSP00000341543/1-190 LVISFAKDSL bmy_21938T0/1-279 LVISFAKDSL ENSTTRP00000001613/1-296 LVISFAKDSL ENSBTAP00000053324/1-190 LVISFAKDNL