KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:03:35 2014 Check: 00 .. Name: bmy_21271T0/1-271 Len: 480 Check: 7123 Weight: 1.00 Name: ENSTTRP00000012339/1-478 Len: 480 Check: 8101 Weight: 1.00 Name: ENSBTAP00000053325/1-480 Len: 480 Check: 8086 Weight: 1.00 Name: ENSP00000296591/1-480 Len: 480 Check: 7109 Weight: 1.00 // 1 50 bmy_21271T0/1-271 ---------- ---------- ---------- ------ML-- ---------- ENSTTRP00000012339/1-478 MKRSVAAWLL VGLSLGVPQF CKXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053325/1-480 MKHSVAAWLL LGLSLSVPQF CRGDICDPNP CENGGICLPG LSDGSFSCKC ENSP00000296591/1-480 MKRSVAVWLL VGLSLGVPQF GKGDICDPNP CENGGICLPG LADGSFSCEC 51 100 bmy_21271T0/1-271 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012339/1-478 XXXXXXXXXX XXXXXXSD-E EPTSAGPCTP NPCHNGGTCE ISEAYRGDTF ENSBTAP00000053325/1-480 PDGFTGPNCS SVVEVASDDE EPTSAGPCTP NPCHNGGTCE ISEAYRGDTF ENSP00000296591/1-480 PDGFTDPNCS SVVEVASDEE EPTSAGPCTP NPCHNGGTCE ISEAYRGDTF 101 150 bmy_21271T0/1-271 ---------- ---------- ---------- ---------- -----PNAFV ENSTTRP00000012339/1-478 IGYVCKCPRG FNGIHCQHNI NECEAEPCKN GGICTDLVAN YSCECPGEFM ENSBTAP00000053325/1-480 IGYVCKCPRG FNGIHCQHNI NECEAEPCKN GGICTDLVAN YSCECPGEFM ENSP00000296591/1-480 IGYVCKCPRG FNGIHCQHNI NECEVEPCKN GGICTDLVAN YSCECPGEFM 151 200 bmy_21271T0/1-271 N--------- ---------- ---------- ---------- ---------- ENSTTRP00000012339/1-478 GRNCQYXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053325/1-480 GRNCQYKCSG PLGIEGGIIS NQQITASSTH RALFGLQKWY PYYARLNKKG ENSP00000296591/1-480 GRNCQYKCSG PLGIEGGIIS NQQITASSTH RALFGLQKWY PYYARLNKKG 201 250 bmy_21271T0/1-271 ---------- -------INL QRKMRVTGVI TQGAKRIGSP EYTKSYKIAY ENSTTRP00000012339/1-478 XXXXXXXXXX XXXXXXXINL QRKMRVTGVI TQGAKRIGSP EYTKSYKIAY ENSBTAP00000053325/1-480 LINAWTAAEN DRWPWIQINL QRKMRVTGVI TQGAKRIGSP EYIKSYKIAY ENSP00000296591/1-480 LINAWTAAEN DRWPWIQINL QRKMRVTGVI TQGAKRIGSP EYIKSYKIAY 251 300 bmy_21271T0/1-271 SNDGKTWAMY TVKGTNEDMV FRGNVDNNTP YANSFTPPIK AQYVRLYPQV ENSTTRP00000012339/1-478 SNDGKTWAMY TVKGTNEDMV FRGNVDNNTP YANSFTPPIK AQYVRLYPQV ENSBTAP00000053325/1-480 SNDGKTWTMY KAKGTNEDMV FHGNVDNNTP YANSFTPPIK AQYVRLYPQV ENSP00000296591/1-480 SNDGKTWAMY KVKGTNEDMV FRGNIDNNTP YANSFTPPIK AQYVRLYPQV 301 350 bmy_21271T0/1-271 CRRHCTLRME LLGCELSGCS EPLGMKSGHI QDYQITASSI FRTLNMDMFT ENSTTRP00000012339/1-478 CRRHCTLRME LLGCELSGC- EPLGMKSGHI QDYQITASSI FRTLNMDMFT ENSBTAP00000053325/1-480 CRRHCTLRME LLGCELSGCS EPLGMKSGHI QDYQITASSI FRTLNMDMFT ENSP00000296591/1-480 CRRHCTLRME LLGCELSGCS EPLGMKSGHI QDYQITASSI FRTLNMDMFT 351 400 bmy_21271T0/1-271 WEPRKARLDK QGKVNAWTSG HNDQSQWLQV DLLVPTKVTG IITQGAKDFG ENSTTRP00000012339/1-478 WEPRKARLDK QGKVNAWTSG HNDQSQWLQV DLLVPTKVTG IITQGAKDFG ENSBTAP00000053325/1-480 WEPRKARLDK QGKVNAWTSG HNDQSQWLQV DLLVPTKVTG IITQGAKDFG ENSP00000296591/1-480 WEPRKARLDK QGKVNAWTSG HNDQSQWLQV DLLVPTKVTG IITQGAKDFG 401 450 bmy_21271T0/1-271 HVQFVGSYKL AYSNDGEHWT VYQDEKQRKD KVFQGNFDND THRKNVIDPP ENSTTRP00000012339/1-478 HVQFVGSYKL AYSNDGEHWT VYQDEKQRKD KVFQGNFDND THRKNVIDPP ENSBTAP00000053325/1-480 HVQFVGSYKL AYSNDGEHWT VYQDEKQRKD KVFQGNFDND THRKNVIDPP ENSP00000296591/1-480 HVQFVGSYKL AYSNDGEHWT VYQDEKQRKD KVFQGNFDND THRKNVIDPP 451 500 bmy_21271T0/1-271 IYARHIRILP WSWYGRITLR SELLGCTEEE ENSTTRP00000012339/1-478 IYARHIRILP WSWYGRITLR SELLGCTEEE ENSBTAP00000053325/1-480 IYARHIRILP WSWYGRITLR SELLGCTEEE ENSP00000296591/1-480 IYARHIRILP WSWYGRITLR SELLGCTEEE