KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:03:57 2014 Check: 00 .. Name: ENSBTAP00000053343/1-958 Len: 1064 Check: 4989 Weight: 1.00 Name: BACU017094/1-1024 Len: 1064 Check: 3383 Weight: 1.00 Name: bmy_02440T0/1-1055 Len: 1064 Check: 6416 Weight: 1.00 Name: ENSTTRP00000007652/1-926 Len: 1064 Check: 8196 Weight: 1.00 // 1 50 ENSBTAP00000053343/1-958 ---------- ---------- ---------- ---------- ---------- BACU017094/1-1024 METATA---- --KHQWASPQ QDGRAGLADH VTSPVEDRRG LEP------- bmy_02440T0/1-1055 METLAAAGRG EGRRAGRPPL RTGRERGGGL VWTALGSGRT INVTYRILRF ENSTTRP00000007652/1-926 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000053343/1-958 ---------- ---------- ---------- ---MEDCSVR SAATILASVR BACU017094/1-1024 QGPVQGQKAQ AKSVAQRLAG QPDTKWQSAS VLVMEDCNMH SAASILASVK bmy_02440T0/1-1055 EVPVAPLEDQ NLINVTSLQR AGCCGLRSAS ILVMEDCNVH SAASILASVK ENSTTRP00000007652/1-926 ---------- ---------- ---------- ---MEDCNVH SAASILASVK 101 150 ENSBTAP00000053343/1-958 EQEARFELLT RALEQERRHV ALQLERAQQP -----GAGGG QSLPMAWQQL BACU017094/1-1024 EQEARFERLT RALEQERRHV ALQLERAQQP GMGSSGVGSG QPLSMAWQQL bmy_02440T0/1-1055 EQEARFERLT RALEQERRHV ALQLERAQQP GMGSSGVGSG QPLSMAWQQL ENSTTRP00000007652/1-926 EQEARFERLT RALEQERRHV ALQLERAQQP GMGSSGVGSG QPLSMAWQQL 151 200 ENSBTAP00000053343/1-958 VLQEQSPGSQ ASLATMPEAP EVLEETVTVE EDPGTPTSHV SIVTSEDGTT BACU017094/1-1024 VLQEQSPGSQ ASLAMMPEAP EVLEETVTVE EDPGTPTSHV SIITSEDGTT bmy_02440T0/1-1055 VLQEQSPGSQ ASLAMMPEAP EVLEETVTVE EDPGTPTSHV SIITSEDGTT ENSTTRP00000007652/1-926 VLQEQSPGSQ ASLAMMPEAP EVLEETVTVE EDPGTPTSHV SIVTSEDGTT 201 250 ENSBTAP00000053343/1-958 RRTETKVTKT VKTVTTRTLR QVPVGPDGLP LLDGGPPLGP FTDGPLDRHF BACU017094/1-1024 RRTETKVTKT VKTVTTRTVR QVPVGPAGLP LLDGGHPLGP FTDGPLDRHF bmy_02440T0/1-1055 RRTETKVTKT VKTVTTRTVR QVPVGPDGLP LLDGGHPLGP FTDGPLDRHF ENSTTRP00000007652/1-926 RRTETKVTKT VKTVTTRTVR QVPVGPDGLP LLDGGHPLGP FTDGPLDRHF 251 300 ENSBTAP00000053343/1-958 LLRGGGPAAT LSRTCLGGGG GFPDEPRDVP GYGSLSRGLG VRPPRGGPPG BACU017094/1-1024 LLRGGGPAAT LSRTCLGSGG GFPDEPRDIP SYGSLSRGLG VRPPRGGLLG bmy_02440T0/1-1055 LLRGGGPAAT LSRTCLGSGG GFPDEPRDVP SYGSLSRGLG VRPPRGGPLG ENSTTRP00000007652/1-926 LLRGGGPAAT LSRTCLGSGG GFPDEPRDVP SYGSLSRGLG VRPPRGGPLG 301 350 ENSBTAP00000053343/1-958 PGPGDGCFTL PSRREAFPVG PGPEPGPPAS RSQPERFQAE PYGLEDDARS BACU017094/1-1024 PGPGAGSFTL PSRREAFPAG --PEPGPPAG RSQPERFQAE PYGLEDDTRS bmy_02440T0/1-1055 PGPGDGCFTL PSRREAFPAG --PEPGLPAG RSQPERFQAE PYGLEDDTRS ENSTTRP00000007652/1-926 PGPGDGCFTL PSRREAFPAG --PEPGPPAG RSQPERFQAE PYGLEDDTRS 351 400 ENSBTAP00000053343/1-958 LAADEEGAPE LEPDYCTAAR RRPDCGRGLR SRAYEDVVDD GGELMEERPP BACU017094/1-1024 LAAEDEGGPE LEPDCGTAAR RRPDCGRGLR TRAYEDVADD GGELMEERPP bmy_02440T0/1-1055 LAAEDEGGPE LEPDCGTAAR RRPDCGRGLR TRAYEDVADD GGELMEERPP ENSTTRP00000007652/1-926 LAAEDEGGPE LEADCGTAAR RRPDCGRGLR TRAYEDVADD GGELMEERPP 401 450 ENSBTAP00000053343/1-958 FPATAAPLAQ PERGSLGSLE RVVRRSPSAD SARKEPRWRD PELPEVLAML BACU017094/1-1024 FPATAAPLAQ PEHGSLGSLD RAVRRSPSVD SARKEPRWRD PELPEVLAML bmy_02440T0/1-1055 FPATAAPLAQ PEHGSLGSLD RAVRRSPSVD SARKEPRWRD PELPEVLAML ENSTTRP00000007652/1-926 FPATTAPLAQ PEHGSLGSLD RAVRRSPSVD SARKEPRWRD PELPEVLAML 451 500 ENSBTAP00000053343/1-958 RHPVDPVKAN AAAYLQHLCF ENEAVKRRVR QLRGLPLLVA LLDHPRAEVR BACU017094/1-1024 RHPVDPVKAN AAAYLQHLCF ENEGVKRRVR QLRGLPLLVA LLDHPRAEVR bmy_02440T0/1-1055 RHPVDPVKAN AAAYLQHLCF ENEGVKRRVR QLRGLPLLVA LLDHPRAEVR ENSTTRP00000007652/1-926 RHPVDPVKAN AAAYLQHLCF ENEGVKRRVR QLRGLPLLVA LLDHPRAEVR 501 550 ENSBTAP00000053343/1-958 RRACGALRNL SYGRDADNKA AIRDCGGVPA LVRLLRAARD SEVRELVTGT BACU017094/1-1024 RRACGALRNL SYGRDADNKA AIRDCGGVPA LVRLLRAARD SEVRELVTGT bmy_02440T0/1-1055 RRACGALRNL SYGRDADNKA AIRDCGGVPA LVRLLRAARD SEVRELVTGT ENSTTRP00000007652/1-926 RRACGALRNL SYGRDADNKA AIRDCGGVPA LVRLLRAARD SEVRELVTGT 551 600 ENSBTAP00000053343/1-958 LWNLSSYEPL KMVIIDHGLQ TLTHEVIVPN SGWEPEPNED SKPRDAEWTT BACU017094/1-1024 LWNLSSYEPL KMVIIDHGLQ TLTHEVIVPH SGWEPEPNED SKPRDAEWTT bmy_02440T0/1-1055 LWNLSSYEPL KMVIIDHGLQ TLTHEVIVPH SGWEPEPNED SKPRDAEWTT ENSTTRP00000007652/1-926 LWNLSSYEPL KMVIIDHGLQ TLTHEVIVPH SGWEPEPNED SKPRDAEWTT 601 650 ENSBTAP00000053343/1-958 VFKNTSGCLR NVSSDGAEAR RRLRECEGLV DALLHALQSA VGRKDTDNKS BACU017094/1-1024 VFKNTSGCLR NVSSDGAEAR RRLRECEGLV DALLHALQSA VGRKDTDNKS bmy_02440T0/1-1055 VFKNTSGCLR NVSSDGAEAR RRLRECEGLV DALLHALQSA VGRKDTDNKS ENSTTRP00000007652/1-926 VFKNTSGCLR NVSSDGAEAR RRLRECEGLV DALLHALQSA VGRKDTDNKS 651 700 ENSBTAP00000053343/1-958 VENCVCIVRN LSYHVHKEVP GAERYQEAEP GPPGGSGSAQ RRSREDAGCF BACU017094/1-1024 VENCVCIVRN LSYHVHKEVP GADRYQEAEP RLPGSAMGAQ RRRREDAGCF bmy_02440T0/1-1055 VENCVCIVRN LSYHVHKEVP GADRYQEAEP RPPGSAMGAQ RRRREDAGCF ENSTTRP00000007652/1-926 VENCVCIVRN LSYHVHKEVP GADRYQEAEP RPPGSAMGAQ RRRREDAGCF 701 750 ENSBTAP00000053343/1-958 GGKKAKEEWF HQGKRDGEMD QNSDTLDLPK RTEAAKGFEL LYQPEVVRLY BACU017094/1-1024 GGKKAKGK-- ----RDGEMD RNFDTLDLPK RTEAAKGFEL LYQPEVVRLY bmy_02440T0/1-1055 GGKKAKGK-- ----RDGEMD RNFDTLDLPK RTEAAKGFEL LYQPEVVRLY ENSTTRP00000007652/1-926 GGKKAKEEWF HEXXXXXXXX XXXXXXXXXX XXXXXXXFEL LYQPEVVRLY 751 800 ENSBTAP00000053343/1-958 LSLLTESRNF NTLEAAAGAL QNLSAGNWVW ATYIRAAVRK ERGLPVLVEL BACU017094/1-1024 LSLLTESRNF NTLEAAAGAL QNLSAGNWVW ATYIRATVRK ERGLPVLVEL bmy_02440T0/1-1055 LSLLTESRNF NTLEAAAGAL QNLSAGNWVW ATYIRATVRK ERGLPVLVEL ENSTTRP00000007652/1-926 LSLLTESRNF NTLEAAAGAL QNLSAGNWVW ATYIRATVRK ERGLPVLVEL 801 850 ENSBTAP00000053343/1-958 LQSETDKVVR AVAIALRNLS LDRRNKDLIG SYAMAELVRN VRSAQAPARP BACU017094/1-1024 LQSETDKVVR AVAIALRNLS LDRRNKDLIG SYAMAELVRN VRSAQAPMRP bmy_02440T0/1-1055 LQSETDKVVR AVAIALRNLS LDRRNKDLIG SYAMAELVRN VRSTQAPARP ENSTTRP00000007652/1-926 LQSETDKVVR AVAIALRNLS LDRRNKDLXX SYAMAELVRN VRSAQAPARP 851 900 ENSBTAP00000053343/1-958 GVRLEEDTVV AVLNTIHEIV SDSLDNARSL LQARGVPALV ALGASSQSVR BACU017094/1-1024 GACLEEDTVV AVLNTIHEIV SDSLDNARSL LQARGVPALV ALGTSSQSVR bmy_02440T0/1-1055 GACLEEDTVV AVLNTIHEIV SDSLDNARSL LQARGVPALV ALGTSSQSVR ENSTTRP00000007652/1-926 GACLEEDTVV AVLNTIHEIV SDSLDNARSL LQARGVPALV ALGASSQSVR 901 950 ENSBTAP00000053343/1-958 EAKAASHVLQ TVWSYKELRS ALQKDGWSKA RFQSAAANAR GPKAAPSPGG BACU017094/1-1024 EAKAASHVLQ TVWSHKELRG ALQRDGWTKA RFQSGSANAK GPKAPPSPGG bmy_02440T0/1-1055 EAKAASHVLQ TVWSYKELRG ALQRDGWTKA RFQSGSANAK GPKAPPSPGG ENSTTRP00000007652/1-926 EAKAASHVLQ TVWSYKELRG ALQRDGWTKA RFQSGSANAK GPKAPPSPGG 951 1000 ENSBTAP00000053343/1-958 LDDSTLPLVE KSL------- ---------- -DGEKPGGRD MIPMEALGPA BACU017094/1-1024 LDDSTLPLVD KSL------- ---------- -DGEKSGSRD VIPMEALGP- bmy_02440T0/1-1055 LDDSTLPLVD KSLGEYEAGV HPEPATRSYL ADGEKPGSQD VIPMEALGP- ENSTTRP00000007652/1-926 LDDSTLPLVD KSL------- ---------- -DGEKPGSRD MIPMEALGP- 1001 1050 ENSBTAP00000053343/1-958 DGYSTMDRRE RRPRGSDPAG ETSEKEPLKP DPSRKAPPPG PSRPAVRLVD BACU017094/1-1024 DGYSTVDRRE CRARGSDPAG EASEKESLKP DPGRKAPPPG PSRPAVRLVD bmy_02440T0/1-1055 DGYSTVDRRE CRARGSDPAG EASEKESLKP DPSRKAPPPG PSRPAVRLVD ENSTTRP00000007652/1-926 DGYSAVDRRE CRARGSDPAG EASEKESLKP ---------- ---------- 1051 1100 ENSBTAP00000053343/1-958 AVGDARPQPV DSWV BACU017094/1-1024 AVGDAKPQPV DSWV bmy_02440T0/1-1055 AVGDAKPQPV DSWV ENSTTRP00000007652/1-926 ---------- ----