KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:04:00 2014 Check: 00 .. Name: ENSTTRP00000001564/1-728 Len: 792 Check: 330 Weight: 1.00 Name: ENSBTAP00000053352/1-726 Len: 792 Check: 1023 Weight: 1.00 Name: bmy_14892T0/1-565 Len: 792 Check: 4155 Weight: 1.00 Name: BACU008986/1-272 Len: 792 Check: 7121 Weight: 1.00 // 1 50 ENSTTRP00000001564/1-728 -LSFFRRTLG RRSMRRQAER DRLREAQRAA MHIPAAGDAR AVITCRVSLL ENSBTAP00000053352/1-726 MLSFFRRTLG RRSMRKQAEK DRLREAQRAA THIPAAGDAR AVITCRVSLL bmy_14892T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU008986/1-272 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001564/1-728 DGTDVSVDLP KKAKGQELFD QIMYHLDLIE SDYFGLRFMD SAQVAHWLDG ENSBTAP00000053352/1-726 DGTDVSVDLP KKAKGQELFD QIMYHLDLIE SDYFGLRFMD SAQVAHWLDG bmy_14892T0/1-565 ---------- ---------- ----MXDL-- ---------- ---------- BACU008986/1-272 ---------- ---------- ----MLDL-- ---------- ---------- 101 150 ENSTTRP00000001564/1-728 TKSIKKQVKI GSPYCLHLRV KFYSSEPNNL REERTRYLFV LQLKQDILSG ENSBTAP00000053352/1-726 TKSIKKQVKI GSPYCLHLRV KFYSSEPNNL REELTRYLFV LQLKQDILSG bmy_14892T0/1-565 ---------- ----CIQ--- ---------- ---------- ---------- BACU008986/1-272 ---------- ----CVQ--- ---------- ---------- ---------- 151 200 ENSTTRP00000001564/1-728 KLECPFDTAV QLAAYNLQAE LGDYDLAEHS PELVSEFRFV PVQTEEMELA ENSBTAP00000053352/1-726 KLECPFDTAV QLAAYNLQAE LGDYDLAEHS PELVSEFRFV PIQTEEMELA bmy_14892T0/1-565 ---------- -------TAE LGDYDLAEHS PDVVSEFRFV PVQTEEMELA BACU008986/1-272 ---------- -------TAE LGDYDLAEHS PDVVSEFRFV PVQTEEMELA 201 250 ENSTTRP00000001564/1-728 VFEKWKECRG QTPAQAETNY LNKAKWLEMY GVDMHVVKAR DGNDYSLGLT ENSBTAP00000053352/1-726 IFEKWKEYRG QTPAQAETNY LNKAKWLEMY GVDMHVVKAR DGNDYSLGLT bmy_14892T0/1-565 VFEKWKEYRG QTPAQAETNY LNKAKWLEMY GVDMHVVKAR DGNDYSLGLT BACU008986/1-272 VFEKWKEYRG QTPAQAETNY LNKAKWLEMY GVDMHVVKAR DGNDYSLGLT 251 300 ENSTTRP00000001564/1-728 PTGVLVFEGE TKIGLFFWPK ITRLDFKKNK LTLVVVEDDD QGKEQEHTFV ENSBTAP00000053352/1-726 PTGVLVFEGE TKIGLFFWPK ITRLDFKKNK LTLVVVEDDD QGKEQEHTFV bmy_14892T0/1-565 PTGVLVFEGE TKIGLFFWPK ITRLDFKKNK LTLVVVEDDD QGKEQEHTFV BACU008986/1-272 PTGVLVFEGE TKIGLFFWPK ITRLDFKKNK LTLVVVEDDD QGKEQEHTFV 301 350 ENSTTRP00000001564/1-728 FRLDHPKACK HLWKCAVEHH AFFRLRGPVQ KRSHRSGFIR LGSRFRYSGK ENSBTAP00000053352/1-726 FRLDHPKACK HLWKCAVEHH AFFRLRGPVQ KNSHRSGFIR LGSRFRYSGK bmy_14892T0/1-565 FRLDHPKACK HLWKCAVEHH AFFRLRGPVQ KGSHRSGFIR LG------GK BACU008986/1-272 FRLDHPKACK HLWKCAVEHH AFFRLRGPVQ KGSHRSGFIR LGSRFRYSGK 351 400 ENSTTRP00000001564/1-728 TEYQTTKTNK ARRSTSFERR PSKRYSRRTL QMQASTGKPE ELSVHSNVSA ENSBTAP00000053352/1-726 TEYQTTKTNK ARRSTSFERR PSKRYSRRTL QVKASTGKPE ELSVHNNVSA bmy_14892T0/1-565 TEYQTTKTNK ARRSASFERR PSKRYSRRAL QVQ---GKPE ELSVHNNVSA BACU008986/1-272 TEYQTTKTNK ARRSTSFERR PSKRYSRRAL QVQ------- ---------- 401 450 ENSTTRP00000001564/1-728 QSNGSRQAWG VRSTVPVIPS VPSGPLLVQV ENLPRSPGAD QHDKKCLPLK ENSBTAP00000053352/1-726 QSNGSQQAWG VRSTVPVI-- -PSGPVVVEV ENLPKSPGAD QHDKKCLPLK bmy_14892T0/1-565 QSNGSRQAWG VRSTVPVIPS VPSGPVLVQV ENLPRSAGAD QHDKTCLPLK BACU008986/1-272 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000001564/1-728 IDLLDSPDLL ETTIDDVVGA PDTMAMSQAP GEVSTATRQA GLEGLEGE-- ENSBTAP00000053352/1-726 LDLLDSPDLL ETTINEVAGA PDTMDTSQAP GEVSTATRQA GLEGPEGECR bmy_14892T0/1-565 IDLLDSPDLL ETTIDDVVGA PDTMAMSQAP GEVSTAARQA GLEGLE---- BACU008986/1-272 ---------- ---------- ---------- GDVQ------ ---------- 501 550 ENSTTRP00000001564/1-728 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXEEVVKLT EKCLNNAIDS ENSBTAP00000053352/1-726 TFIDASEKLK HLEMENSPVP APHPNVDVNI NNQEEVVKLT EKCLNNAIDS bmy_14892T0/1-565 ALKDASEKLK HLEMESGPLP ASPPNRDVNI STQEEVVKLT EKCLNNAIDS BACU008986/1-272 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000001564/1-728 PALNARRVPP DLKSNILKAR VEAVQKXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053352/1-726 PALNTRRVPP DLKSNILKAQ VEAVQKVTRE DRVLSHKNAS VQDASTDSAE bmy_14892T0/1-565 PALNARRVPP DLKSNILKAQ VEAVQK---- ---------- ---------- BACU008986/1-272 PCLRGR---- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000001564/1-728 XXXXXXXXXX GSLVPTRTL- AENGPALKGA TDELDALLLS LTENLIDHTT ENSBTAP00000053352/1-726 LNENTVPVRG DSLALMQTTP AESGSALKDA TDELDALLLS LTENLLDHTT bmy_14892T0/1-565 ---------- ---------- --------DA TDELDALLLS LTENLIDHTT BACU008986/1-272 ---------- ---------- ---------- ------LFLT LRPVLV---- 651 700 ENSTTRP00000001564/1-728 TPQVSSISTI APRWIVPQSA ALPNGLAGDS GLSPAGKEGP GNRGVVSLIS ENSBTAP00000053352/1-726 IPQVSSTSVI TPRWIVPQST VLPNGLAG-N GFSLTGKEGL GSR---ELIS bmy_14892T0/1-565 TPQVSSISTI TPRWIVP-SA ALPNGLAGDN GLSPAGKEGP GNRGVVSLIS BACU008986/1-272 ---------- ---------- ---------- --LGAGEE-- ---------- 701 750 ENSTTRP00000001564/1-728 PPAPFFVDAV T--------- ---------- ---------- ---------- ENSBTAP00000053352/1-726 PPAPFLVDAV T--------- ---------- ---------- ---------- bmy_14892T0/1-565 PPAPFFVDAV TRRSIIAPFL TSDVFLLGSS LCWTSHLEAE VFADNRALRG BACU008986/1-272 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000001564/1-728 ---------- -------SSA PASAGEATLK Q-CLL--TTE L- ENSBTAP00000053352/1-726 ---------- -------SSA PASAGEATLK QKCLL--TTE L- bmy_14892T0/1-565 GGSSPVTRGR ALQPSVLEST SAGAGSALVG KKAQLGVTPS L- BACU008986/1-272 ---------- -------AAS VLLVSSRQLK SSSLL--DLV LA