KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:18 2014 Check: 00 .. Name: ENSTTRP00000002705/1-604 Len: 845 Check: 7951 Weight: 1.00 Name: ENSP00000380488/1-237 Len: 845 Check: 3502 Weight: 1.00 Name: ENSBTAP00000053374/1-604 Len: 845 Check: 1180 Weight: 1.00 Name: bmy_22162T0/1-310 Len: 845 Check: 7382 Weight: 1.00 Name: BACU009022/1-772 Len: 845 Check: 1206 Weight: 1.00 // 1 50 ENSTTRP00000002705/1-604 MAMARKIKTL LTVNILVFVG IILFSVYCRL QDRSEGPVQI VRSADRRVRS ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 MAVARKIKTL LTVNILVFVG IILFSVYCRL QDRSEGLVQI VRSADRRVRS bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 MAVARKIKTL LTVNILVFVG IILFSVYCRL QDRSEGLVQI VRGADRRVRS 51 100 ENSTTRP00000002705/1-604 RHATVGALAE REAILQRLGH LEEVVYTQLN GLAKPIGLVE GPGGLGQGGM ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 RHAKVGALAE REAILQRLDH LEEVVYNQLN GLAKPIGLVE GPGGLGQGGM bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 RHAKVGALAE REAILQRLDH LEEVVYTQLN GLAKPIGLVE GPGGLGQGGM 101 150 ENSTTRP00000002705/1-604 AATLRDDSQE TEGKFEEYGY NAQLSDRISL DRTIPDYRPK KCRQMTYSDD ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 AATLRDDSQE TEGKFEEYGY NAQLSDRISL DRTIPDYRPK KCRQMTYSDD bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 AATLRDNSQE TEGKFEEYGY NAQLSDRISL DRTIPDYRPK KCRQMTYSDD 151 200 ENSTTRP00000002705/1-604 LPQISVVFIF VNEALSVILR SVHSVVNHTP SQLLREVILV DDNSDNXXXX ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 LPQISVVFIF VNEALSVILR SVHSVVNHTP SQLLKEVILV DDNSDNVELK bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 LPQISVVFIF VNEALSVILR SVHSVVNLTP SQLLKEVILV DDNSDNVELK 201 250 ENSTTRP00000002705/1-604 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 LNLDQYVSKR YPGLVKIVRN SRREGLIRAR LQGWKVATAP VVGFFDAHVE bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 LNLDQYVSKR YPGLVKIVRN SRREGLIRAR LQGWKVATAP VVGFFDAHVE 251 300 ENSTTRP00000002705/1-604 XXXXXAEPAL SRIREDRRRI VLPAIDNIKY DTFEVQQYAS AAHGYNWGLW ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 FSTGWAEPAL TRIREDRRRI VLPAIDNIKY DTFEVQQYAS AAHGYNWGLW bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 FSMGWAEPAL SRIREDRRRI VLPAIDNIKY DTFEVQQYAS AAHGYNWGLW 301 350 ENSTTRP00000002705/1-604 CMYIIPPQDW LDRGDEAAPI RTPAMIGCSF VVDREYFGDI GLLDPGMEVY ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 CMYIVPPQDW LDRGDEAAPI RTPAMIGCSF VVDREYFGDI GLLDPGMEVY bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 CMYIIPPQDW LDRGDEAAPI RTPAMIGCSF VVDREYFGDI GLLDPGMEVY 351 400 ENSTTRP00000002705/1-604 GGENIELGMR ---------- ---------- ---------- ---------- ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 GGENIELGMR ---------- ---------- ---------- ---------- bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 GGENIELGMR VSQGRFSVLI REGGPGLTIR TADRPPDHAE KLQQPRPLSS 401 450 ENSTTRP00000002705/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 ---------- ---------- ---------- ---------- ---------- bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 FDPGTPEAFG VNAEAAGSRR PTPTPPPSPS GTRAASGEAA AVVCWAASSN 451 500 ENSTTRP00000002705/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 ---------- ---------- ---------- ---------- ---------- bmy_22162T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU009022/1-772 GPETGWVSAL GPKLFISGPR CVSAELPSVP VAGALGPRAP AEAPGGSWMS 501 550 ENSTTRP00000002705/1-604 ---------- ---------- --------VW QCGGSMEVLP CSRVAHIERT ENSP00000380488/1-237 ---------- ---------- ---------- -----MEVLP CSRVAHIERT ENSBTAP00000053374/1-604 ---------- ---------- --------VW QCGGSMEVLP CSRVAHIERT bmy_22162T0/1-310 ---------- ---------- ---------- -----MEVLP CSRVAHIERT BACU009022/1-772 LLKSPPRGRG LLHRTAARPQ GELSPVAGVW QCGGSMEVLP CSRVAHIERT 551 600 ENSTTRP00000002705/1-604 KKPYNNDIDY YAKRNALRAA EVWMDSFKSH VYMAWNIPMS ---------- ENSP00000380488/1-237 RKPYNNDIDY YAKRNALRAA EVWMDDFKSH VYMAWNIPMS ---------- ENSBTAP00000053374/1-604 KKPYNNDIDY YAKRNALRAA EVWMDGFKSH VYMAWNIPMT ---------- bmy_22162T0/1-310 KKPYNNDIDY YAKRNALRAA EVWMDSFKSH VYMAWNIPMS AFPIGPAALD BACU009022/1-772 KKPYNNDIDY YAKRNALRAA EVWMDSFKSH VYMAWNIPMS ---------- 601 650 ENSTTRP00000002705/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000380488/1-237 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053374/1-604 ---------- ---------- ---------- ---------- ---------- bmy_22162T0/1-310 LPGAWEGRRP PDEARGREAL SAGTLLGWGA CRSWGSPQPP GRGLAGAGSA BACU009022/1-772 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000002705/1-604 ---------- ---NPGVDFG DVSERLALRR RLKCRSFKWY LDNVYPEMRT ENSP00000380488/1-237 ---------- ---NPGVDFG DVSERLALRQ RLKCRSFKWY LENVYPEMRV ENSBTAP00000053374/1-604 ---------- ---NPGVDFG DVSERLALRQ RLKCRSFKWY LDNVYPEMRT bmy_22162T0/1-310 HRSARPASLP ASQNPGVDFG DVSERLALRQ RLKCHSFKWY LDNVYPEMRT BACU009022/1-772 ---------- ---NPGVDFG DVSERLALRQ RLKCHSFKWY LDNVYPEMRT 701 750 ENSTTRP00000002705/1-604 YNDTLTYGEV RNSKASGYCL DQGAEDDDRA ILYPCHGMSS QXXXXXXXXX ENSP00000380488/1-237 YNNTLTYGEV RNSKASAYCL DQGAEDGDRA ILYPCHGMSS QLVRYSADGL ENSBTAP00000053374/1-604 YNDTLTYGEV RNSKASGYCL DQGAEDDDRA ILYPCHGMSS QLVRYSAEGL bmy_22162T0/1-310 YNDTLTYGEV RNSKASGYCL DQGAEDDDRA ILYPCHGMSS QLVRYSAEGL BACU009022/1-772 YNDTLTYGEV RNSKASGYCL DQGAEDDDRA ILYPCHGMSS QLVRYSAEGL 751 800 ENSTTRP00000002705/1-604 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXGGP ENSP00000380488/1-237 LQLGPLGSTA FLPDSKCLVD DGTGRMPTLK KCEDVARPTQ RLWDFTQSGP ENSBTAP00000053374/1-604 LQLGPLGSTA FLPDSKCLVD DGRGRTPALK KCEDVARPAQ RLWDFTQGGP bmy_22162T0/1-310 LQLGPLGSTA FLPDSKCLVD DGRGRTPALR KCEDVARPAQ RLWDFTQGGP BACU009022/1-772 LQLGPLGSTA FLPDSRCLVD DGRGRTPALR KCEDVARPAQ RLWDFTQGGP 801 850 ENSTTRP00000002705/1-604 IVSRDTGRCL EVEMSKDANF GLRLVVQRCS GQKWTISNWI KPGRH ENSP00000380488/1-237 IVSRATGRCL EVEMSKDANF GLRLVVQRCS GQKWMIRNWI KHARH ENSBTAP00000053374/1-604 IVSRDTGRCL EVEMSKDANF GLRLVVQRCS GQKWTIRNWI KPGRH bmy_22162T0/1-310 IVSRDTGRCL EVEMSKDANF GLRLVVQRCS GQKWTIRNWI QPGRH BACU009022/1-772 IVSRDTGRCL EVEMSKDANF GLRLVVQRCS GQKWTIRNWI QPGRH