KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:22 2014 Check: 00 .. Name: ENSTTRP00000003071/1-913 Len: 1031 Check: 1470 Weight: 1.00 Name: ENSP00000422037/1-911 Len: 1031 Check: 6208 Weight: 1.00 Name: ENSBTAP00000053384/1-916 Len: 1031 Check: 9270 Weight: 1.00 Name: bmy_21212T0/1-980 Len: 1031 Check: 7327 Weight: 1.00 Name: BACU008745/1-916 Len: 1031 Check: 970 Weight: 1.00 // 1 50 ENSTTRP00000003071/1-913 ---------- ---------- ---------- ---------- ---------- ENSP00000422037/1-911 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053384/1-916 ---------- ---------- ---------- ---------- ---------- bmy_21212T0/1-980 AGSVCSSPVT ALPLSPRRRF PPPRFSFSGA GCSLTRGPFL CLVLSLFDPS BACU008745/1-916 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003071/1-913 ---------- ---------- ---------- ---------- ---------- ENSP00000422037/1-911 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053384/1-916 ---------- ---------- ---------- ---------- ---------- bmy_21212T0/1-980 PKPGLSGDSP SGRDRAATFS NSVPTPRRPP SFRLSHRLPP LSFFPALVPP BACU008745/1-916 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003071/1-913 ---------- ----MEASWR QVASGRGRAR GRATAVPSPG NGVHLRGAGG ENSP00000422037/1-911 ---------- ----MEASWR QVAGGRGRSR GRATAAPS-G NGVHLRGAGG ENSBTAP00000053384/1-916 ---------- ----MEASWR QVAGGRGRAR GRGTAAPSSG NGVHLRGAGG bmy_21212T0/1-980 RSRSFHSFFF SSAGMEASWR QVASGRGRAR GRATAAPSSG NGVHLRGAGG BACU008745/1-916 ---------- ----MEASWR QVASGRGRAR GRATAAPSSG NGVHLRGVGG 151 200 ENSTTRP00000003071/1-913 GREKGSVGAA GLGPIPGGAA TPAAAGSSAR RSPAGSEAPQ TSVA-SELMS ENSP00000422037/1-911 GREKGSVGAV PSGTSPGGVA TTAAAGS--R HSPAGSQALQ TTAA-SELMS ENSBTAP00000053384/1-916 GREKGSVGAA GPGLSPGGAA TPAAAGSSAR RCPAGSEAPQ TSVAGAELMS bmy_21212T0/1-980 GREKGSVGAA GLGPIPGGAA TSAAAGSSAR RSPAGSEAPQ TSVA-SELMS BACU008745/1-916 GREKGSVGAA GLGPIPGGAA TSAAAGSSAR RSPAGSEAPQ TSVA-SELMS 201 250 ENSTTRP00000003071/1-913 QKKFEEIKKA NQAAAKKLVE EHLNSSSEEE GDEDFEGKRG KIVANTFITY ENSP00000422037/1-911 QKKFEEIKKA NQAAARKLVE EQFSSSS-EE GDEDFEGKQG KILANTFITY ENSBTAP00000053384/1-916 QKKFEEIKKA NQAAAKKIVE EHFSSSSEEE GDEDFEGKRG KIVANTFITY bmy_21212T0/1-980 QKKFEEIKKA NQAAAKKLVE EHFNSSSEEE GDEDFEGKRG KIVANTFITY BACU008745/1-916 QKKFEEIKKA NQAAAKKLVE EHFNSSSEEE GDEDFEGKRG KIVANTFITY 251 300 ENSTTRP00000003071/1-913 TTQTDGDVRE LERTKQYVNE AFQAGAMTCL ICIASVKRNQ AXXXXXXXXX ENSP00000422037/1-911 TTQTDGDTRE LERTKQYVNE AFQAGAMTCL ICIASVKRNQ AVWSCSGCFC ENSBTAP00000053384/1-916 TTQTDGDVRE LERTKQYVNE AFQAGAMTCL ICIASVKRNQ AVWSCSGCFC bmy_21212T0/1-980 TTQTDGDVRE LERTKQYVNE AFQAGAMTCL ICIASVKRNQ AVWSCSGCFC BACU008745/1-916 TTQTDGDVRE LERTKQYVNE AFQAGAMTCL ICIASVKRNQ AVWSCSGCFC 301 350 ENSTTRP00000003071/1-913 XXXXXXXXXX XXXXXXXXXX -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000422037/1-911 IFHMPCIQKW AKDSQFLVSS -VTDDDFGKK DCPWPCPKCR FEYKRSETPS ENSBTAP00000053384/1-916 IFHMPCIQKW AKDSQFLVSS -LTDDDFGKR DYPWPCPKCR FEYKRSDTPS bmy_21212T0/1-980 IFHMPCIQKW AKDSQFLVSS PLTDDDFGKR DYPWPCPKCR FEYKRSDTPS BACU008745/1-916 IFHMPCIQKW AKDSQFLVSS PLTDDDFGKR DYPWPCPKCR FEYKRSDTPS 351 400 ENSTTRP00000003071/1-913 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000422037/1-911 RYYCYCGKVE DPPLDPWLVP HSCGQVCERE FKPPCGHKCL LLCHPGPCPP ENSBTAP00000053384/1-916 RYYCYCGKVE DPPLDPWLVP HSCGQVCERD FKPSCGHKCL LLCHPGPCPP bmy_21212T0/1-980 RYYCYCGKVE DPPLDPWLVP HSCGQVCERD FKPPCGHKCL LLCHPGPCPP BACU008745/1-916 RYYCYCGKVE DPPLDPWLVP HSCGQVCERD FKPPCGHKCL LLCHPGPCPP 401 450 ENSTTRP00000003071/1-913 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000422037/1-911 CPKMVTTTCY CKKAKPIPRR CSAKEWSCQL PCGQKLLCGQ HKCENPCHAG ENSBTAP00000053384/1-916 CPKMVTTTCY CKKAKPIPRR CSAKEWSCQL PCGRKLLCGQ HKCENPCHAG bmy_21212T0/1-980 CPKMVTTTCY CKKAKPIPRR CSAKEWSCHL PCGRKLLCGQ HKCENPCHAG BACU008745/1-916 CPKMVTTTCY CKKAKPIPRR CSAKEWSCHL PCGRKLLCGQ HKCENPCHAG 451 500 ENSTTRP00000003071/1-913 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVCGKTLP CGNHTCEQVC ENSP00000422037/1-911 SCQPCPRVSR QKCVCGKKVA ERSCASPLWH CDQVCGKTLP CGNHTCEQVC ENSBTAP00000053384/1-916 SCPPCPRVSR QKCVCGKRVA ERSCASPLWH CDQVCGKTLP CGNHTCEQVC bmy_21212T0/1-980 SCPPCPRVSR QKCVCGKQVA ERSCASPLWH CDQVCGKTLP CGNHTCEQVC BACU008745/1-916 SCPPCPRVSR QKCVCGKQVA ERSCASPLWH CDQVCGKTLP CGNHTCEQVC 501 550 ENSTTRP00000003071/1-913 HVGACGECPR SGKRFCPCQK SKFSLPCTED VPTC-DSCDK VLEC-IHRCS ENSP00000422037/1-911 HVGACGECPR SGKRFCPCQK SKFSLPCTED VPTCGDSCDK VLECGIHRCS ENSBTAP00000053384/1-916 HVGACGDCPR SGKRFCPCQK SKFSLPCTED VPTCGDSCDK VLECGIHRCS bmy_21212T0/1-980 HVGACGECPR SGKRFCPCQK SKFSLPCTED VPTCGDSCDK VLECGIHRCS BACU008745/1-916 HVGACGECPR SGKRFCPCQK SKFSLPCTED VPTCGDSCDK VLECGIHRCS 551 600 ENSTTRP00000003071/1-913 QRCHRXXXXX XXXEVEKHCR CGKHTKRMPC HKPYLCETKC VKLRDCQKHQ ENSP00000422037/1-911 QRCHRGPCET CRQEVEKHCR CGKHTKRMPC HKPYLCETKC VKMRDCQKHQ ENSBTAP00000053384/1-916 QRCHRGPCET CRQEVEKHCR CGKHTKRMPC HKPYLCETKC VKMRDCQKHQ bmy_21212T0/1-980 QRCHRGPCET CRQEVEKHCR CGKHTKRMPC HKPYLCETKC VKMRDCQKHQ BACU008745/1-916 QRCHRGPCET CRQEVEKHCR CGKHTKRMPC HKPYLCETKC VKMRDCQKHQ 601 650 ENSTTRP00000003071/1-913 CRRKCCPGNC PPCDQNCGRT LGCRNHKCPS VCHRGSCYPC PETVDVKCNC ENSP00000422037/1-911 CRRKCCPGNC PPCDQNCGRT LGCRNHKCPS VCHRGSCYPC PETVDVKCNC ENSBTAP00000053384/1-916 CRRKCCPGNC PPCDQNCGRT LGCRNHKCPS VCHRGSCYPC PETVDVKCNC bmy_21212T0/1-980 CRR------- ---------- ---------- ---------- ---------- BACU008745/1-916 CRRKCCPGNC PPCDQNCGRT LGCRNHKCPS VCHRGSCYPC PETVDVKCNC 651 700 ENSTTRP00000003071/1-913 GNTKVTVPCG RERTTRPPKC KEQCSRPPTC HHTSQEKHRC HFGSCPPCHQ ENSP00000422037/1-911 GNTKVTVPCG RERTTRPPKC KEQCSRPPTC HHTSQEKHRC HFGSCPPCHQ ENSBTAP00000053384/1-916 GNTKVTVPCG RERTTRPPKC KEQCSRPPTC HHTSQEKHRC HFGSCPPCHQ bmy_21212T0/1-980 ---KVTVPCG RERTTRPPKC KEQCSRPPTC HHTSQEKHRC HFGSCPPCHQ BACU008745/1-916 GNTKVTVPCG RERTTRPPKC KEQCSRPPTC HHTSQEKHRC HFGCCPPCHQ 701 750 ENSTTRP00000003071/1-913 PCRKVLEKCG HLCPAPCHDQ ALIKQTGRXX XXXXXXXXXX XXXXXXXXXX ENSP00000422037/1-911 PCQKVLEKCG HLCPAPCHDQ ALIKQTGRHQ PTGPWEQPSE PAFIQTALPC ENSBTAP00000053384/1-916 PCQKVLEKCG HLCPAPCHDQ ALIKQTGRHQ PTGPWEQPSE PAFIQTALPC bmy_21212T0/1-980 PCRKVLEKCG HLCPAPCHDQ ALIKQTGRHQ PSGPWEQTSE PAFIQTALPC BACU008745/1-916 PCRKVLEKCG HLCPAPCHDQ ALVKQTGRHQ PSGPWEQPSE PAFIQTALPC 751 800 ENSTTRP00000003071/1-913 XXXXXXXXXE CLGKHEVSPL PCHTVGPYSC RRVCGRTLDC QNHTCIKECH ENSP00000422037/1-911 PPCQVPIPME CLGKHEVSPL PCHAVGPYSC KRVCGRILDC QNHTCMKECH ENSBTAP00000053384/1-916 PPCQVPIPME CLGKHEVSPL PCHAVGPYSC KRACGRTLTC QNHTCMKECH bmy_21212T0/1-980 PPCQVPIPME CLGKHEVSPL PCHTVGPYSC RRVCGRTLDC QNHTCMKECH BACU008745/1-916 PPCQVPIPME CLGKHEVSPL PCHTVGPYSC RRVCGRTLDC QNHTCMKECH 801 850 ENSTTRP00000003071/1-913 KVTEIDSCTD KNKAGPECLQ CEEGCSKSRP PGCPHPCVLP CHPGECPPCV ENSP00000422037/1-911 KVTKTDGCTG KNKAGPECLH CEEGCSKSRP LGCLHPCILR CHPGECPPCV ENSBTAP00000053384/1-916 KVTETDSCTD KKKAGPECLH CEEGCSKSRP SGCPHPCVLP CHPGECPPCV bmy_21212T0/1-980 KVTEIDSCTD KNKAGPECLQ CEEGCSKSRP PGCPHPCVLP CHPGECPPCV BACU008745/1-916 KVTEIDSCTD KNKAGPECLQ CEEGCSKSRP PGCPHPCVLP CHPGECPPCV 851 900 ENSTTRP00000003071/1-913 QMLRVKCHCK ITSLYVECRK ITTADVNEKN LLSCCKNQCP KELPCGHRCK ENSP00000422037/1-911 QMLRIKCHCK ITSLYVECRK ITTADVNEKN LLSCCKNQCP KELPCGHRCK ENSBTAP00000053384/1-916 QMLRIKCHCK ITSLYVECRK ITTADVNEKN LLSCCKNQCP KELPCGHRCK bmy_21212T0/1-980 QMLRVKCHCK ITSLYVECRK ITTADVNAKN LLSCCKNQCP KELPCGHRCK BACU008745/1-916 QMLRVKCHCK ITSLYVECRK ITTADVNEKN LLSCCKNQCP KELPCGHRCK 901 950 ENSTTRP00000003071/1-913 EMCHPGECPF NCNQKVKLRC PCKRIKKELQ CNKVRENQIS IECDITCKEM ENSP00000422037/1-911 EMCHPGECPF NCNQKVKLRC PCKRIKKELQ CNKVRENQVS IECDTTCKEM ENSBTAP00000053384/1-916 EMCHPGECPF NCNQKVKLRC PCKRIKKEVQ CNKVRENQIS IECDTTCKEM bmy_21212T0/1-980 EMCHPGECPF NCNQKVKLRC PCKRIKKELQ CNKVRENQIS IECDITCKEM BACU008745/1-916 EMCHPGECPF NCNQKVKLRC PCKRIKKELQ CNKVRENQIS IECDITCKEM 951 1000 ENSTTRP00000003071/1-913 KRKASEIKEA EAKAALEEEK RRQQAELEAF ENRLKGRRKK NRKRDEVAVE ENSP00000422037/1-911 KRKASEIKEA EAKAALEEEK RRQQAELEAF ENRLKGRRKK NRKRDEVAVE ENSBTAP00000053384/1-916 KQKASELKEA EAKAALEEEK RRQQAELEAF ENRLKGRRKK NRKRDEVAVE bmy_21212T0/1-980 KRKASEIKEA EAKAALEEEK RRQQAELEAF ENRLKGRRKK NRKRDEVAVE BACU008745/1-916 KRKASEIKEA EAKAALEEEK RRQQAELEAF ENRLKGRRKK NRKRDEVAVE 1001 1050 ENSTTRP00000003071/1-913 LTLWQKYKYY LFPVCAVVVL VFAWYIAHGV D ENSP00000422037/1-911 LSLWQKHKYY LISVCGVVVV VFAWYITHDV N ENSBTAP00000053384/1-916 LTLWQKYKYY LFPLCAIVVV VFAWYIANAV D bmy_21212T0/1-980 LTLWQKYKYY LFPVCAVVVL VFAWYIAHGV D BACU008745/1-916 LTLWQKYKYH LFPVCAVLVL VFAWYIVHGV D