KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:04:40 2014 Check: 00 .. Name: ENSBTAP00000053425/1-566 Len: 1044 Check: 8546 Weight: 1.00 Name: bmy_19842T0/1-536 Len: 1044 Check: 1178 Weight: 1.00 Name: BACU017947/1-853 Len: 1044 Check: 4224 Weight: 1.00 Name: ENSTTRP00000008906/1-1017 Len: 1044 Check: 6084 Weight: 1.00 // 1 50 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008906/1-1017 MVSCFLESLS VLGSLLLLGF QLVCPQPSTE HRKVPQRMAV AEGAPEDGGG 51 100 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008906/1-1017 GAPGVWGAWG PWSACSRSCS GGVMEQTRPC LPGSYRARGG PPPGAPARAF 101 150 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008906/1-1017 AGHVVSAVRT SVPLHRSREE TRAPASLNSS RQGPAQRGSR HPQARGREPT 151 200 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 ---------- ----MYGYGK APYILPLQTD SAHLPQRLRR QRPSSRNSRS ENSTTRP00000008906/1-1017 AERRSRTRGP IGPGMYGYGK APYILPLQTD SAHLPQRLRR QRPSSRNSRS 201 250 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---MNSDS-- ---------- ---------- BACU017947/1-853 QGASGSSHGY NLPAHRGPRH GPLYQSDSGP RPGLQVSESS IYQLPLTHDQ ENSTTRP00000008906/1-1017 QGASGSSHGY NPAAHRAPRH GPLYQSDSGP RPGLQVSEGS IYQLPLTHDQ 251 300 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 GFPEASSLFH SPETSSSPGL GAHRAAQSFS QPARSTAISC IGAYRQYKLC ENSTTRP00000008906/1-1017 GFPEASNLFH NPETSSSPGL GAHRAAQSFS QPARSTAISC IGAYRQYKLC 301 350 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 NTNVCPESSR SIWEVQCASY NNKPFMGRFY EWEPFAEAKG NRKCELNCQA ENSTTRP00000008906/1-1017 NTNVCPESSR SIWEVQCASY NNKPFMGRFY EWEPFAEAKG NRKCELNCQA 351 400 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 ---------- ---------- ---------- ---------- ---------- BACU017947/1-853 MGYRFYVRQA EKVIDGTPCD QNGTAICVSG QCKSIGCDDY LGSDKVVDKC ENSTTRP00000008906/1-1017 MGYRFYVRQA EKVIDGTPCD QNGTAICVSG QCKSIGCDDY LGSDKVVDKC 401 450 ENSBTAP00000053425/1-566 ---------- ---------- ---------- ---------- ---------- bmy_19842T0/1-536 -VCG------ ---------- ---------- ---------- ---------- BACU017947/1-853 GVCGGDNTGC QVVSGVFKHA LTSLGYHRVV EIPQGATKIN ITEMYKSNNY ENSTTRP00000008906/1-1017 GVCGGDNTGC QVVSGVFKHA LTSLGYHRVV EIPQGATKIN ITEMYKSNNY 451 500 ENSBTAP00000053425/1-566 -ALRSRSGRS IINGNWAIDR PGKYEGGGTM FTYKRPNEIS STAGESFLAE bmy_19842T0/1-536 -TLRSRSGRS IINGNWAIDR PGKYEGGGTM FTYKRPNEIS STAGESFLAE BACU017947/1-853 LALRSRSGRS IINGNWAIDR PGKYEGGGTM FTYKRPNEIS STAGESFLAE ENSTTRP00000008906/1-1017 LALRSRSGRS IINGNWAIDR PGKYEGGGTM FTYKRPNEIS STAGESFLAE 501 550 ENSBTAP00000053425/1-566 GPTNEILDVY ---------- ---------- -------MIH QQPNPGVHYE bmy_19842T0/1-536 GPTNEILDVY QVKKQELQST PDDTIKLWNC PAGVGLRMIH QQPNPGVHYE BACU017947/1-853 GPTNEILDVY ---------- ---------- -------MIH QQPNPGVHYE ENSTTRP00000008906/1-1017 GPTNEILDVY ---------- ---------- -------MIH QQPNPGVHYE 551 600 ENSBTAP00000053425/1-566 YVIMGNNAIS PQVPPHRRPG EPFNGQLVPE GRSQQEGKEK EGDQEKADER bmy_19842T0/1-536 YVIMGSNAIS PQVLPHRRPG EPFNGQLVPE GGSQQEGEGK EGDEEKADVH BACU017947/1-853 YVIMGSNAIS PQVLPHRRPG EPFNGQLVPE GGSQQEGDGK EGDEEKADVH ENSTTRP00000008906/1-1017 YVIMGNNAIS PQVLPHRRPG EPFNGQLVPE GGNQQEGEGK EGDEEKADVH 601 650 ENSBTAP00000053425/1-566 GGAPEMFTLE SAQTFPVRQP DRFSLHRPDS VVPPAPQPPR QSRDHNWKQL bmy_19842T0/1-536 GGAPEIFTSE SAQTFPVRHP DRFSPHRPDN VVPPAPQTPR RSRDHNWKQL BACU017947/1-853 GGAPEIFTSE SAQTFPVRHP DRFSPHRPDN VVAPAPQTPR RSRDHNWKQL ENSTTRP00000008906/1-1017 GGAPEIFTSE SAQTFPVRHP DRFSPHRPDN VVPPAPQTPR RSRDHNWKQL 651 700 ENSBTAP00000053425/1-566 GTTECSTTCG KGSQYPIFRC VNRNTHEEVP ESYCDLTMKP TPEEEPCNIF bmy_19842T0/1-536 GTTECSTTCG KGSQYPIFRC VNRNTHEEVP ESYCDSSMKP TPEEEPCNIF BACU017947/1-853 GTTECSTTCG KGSQYPIFRC VNRNTHEEVP ESYCDLSMKP TPEEEPCNIF ENSTTRP00000008906/1-1017 GTTECSTTCG KGSQYPIFRC VNRNTHEEVP ESYCDSSMKP TPEEEPCNIF 701 750 ENSBTAP00000053425/1-566 PCPAFWDIGE WSECSKTCGL GMQHRQVLCR QVYANRSLTV QPYRCQHLEK bmy_19842T0/1-536 PCPAFSPL-- ---------- ---------- ---------- ---------- BACU017947/1-853 PCPAFWDIGE WSECSKTCGL GMQHRQVLCR QVYANRSLTV QPYRCQHLEK ENSTTRP00000008906/1-1017 PCPAFWDIGE WSECSKTCGL GMQHRQVLCR QVYANRSLTV QPYRCQHLEK 751 800 ENSBTAP00000053425/1-566 PETTSTCQLK ICSEWQIRTD WTSCSVPCGV GQRTRDVKCV SNIGDVVDDE bmy_19842T0/1-536 ---------- ---------- ---CSVPCGV GQRTRDVKCV SNIGDVVDDE BACU017947/1-853 PETTSTCQLK ICSEWQIRTD WTSCSVPCGV GQRTRDVKCV SNIGDVVDDE ENSTTRP00000008906/1-1017 PETTSTCQLK ICSEWQIRTD WTSCSVPCGV GQRTRDVKCV SNIGDVVDDE 801 850 ENSBTAP00000053425/1-566 ECNMKLRPND IENCDMGPCA KSWFLTEWSE RCSAECGAGV RTRSVVCMTN bmy_19842T0/1-536 ECNMKLRPND IENCDMGPCA KSWFLTEWSE RCSAECGAGV RTRSVVCMTN BACU017947/1-853 ECNMKLRPND IENCDMGPCA KSWFLTEWSE RCSAECGAGV RTRSVVCMTN ENSTTRP00000008906/1-1017 ECNMKLRPND IENCDMGPCA KSWFLTEWSE RCSAECGAGV RTRSVVCMTN 851 900 ENSBTAP00000053425/1-566 HVSSLPLEGC GSNRPAEATP CDNGPCTGKV EWFAGSWSQC SVECGSGTQQ bmy_19842T0/1-536 HVSSLPLEGC GNNRPAEATP CDNGPCTGEV EWFAGSWSQC SIECGSGTQQ BACU017947/1-853 HVSSLPLEGC GNNRPVEATP CDNGPCTGEV EWFAGSWSQC SIECGSGTQQ ENSTTRP00000008906/1-1017 HVSSLPLEGC GNNRPVEATP CDNGPCTGEV EWFAGSWSQC SVECGSGTQQ 901 950 ENSBTAP00000053425/1-566 REVICVRKNT DTFEVLDPYE CSFLEKPPSQ QPCHLKPCGA KWFHTEWSMC bmy_19842T0/1-536 REVICVRKNA DTFEVLDPYE CSFLERPPSQ QSCHLKPCGA KWFNTEWSMC BACU017947/1-853 REVICVRKNA DTFEVLDPYE CSFLERPPSQ QSCHLKPCGA KWFNTEWSMC ENSTTRP00000008906/1-1017 REVICVRKNA DTFEVLEPYE CSFLERPPSQ QSCHLKPCGA KWFNTEWSMC 951 1000 ENSBTAP00000053425/1-566 SKTCQGGFRV REVRCLADDM TLSNLCDPQL KPEEKESCNP QDCVPEVDEN bmy_19842T0/1-536 SKSCQGGFRV REVRCLSDEM TLSNLCDPQL KPEEKESCNP QDCVPEVDEN BACU017947/1-853 SKSCQGGFRV REVRCLSDEM TLSNLCDPQL KPEEKESCNP QDCVPEVDEN ENSTTRP00000008906/1-1017 SKSCQGGFRV REVRCLSDEM TLSNLCDPQL KPEEKESCNP QDCVPEVDEN 1001 1050 ENSBTAP00000053425/1-566 CKDRYYNCNV VVQARLCVYN YYKTACCASC TRVANRHSGF PGSR bmy_19842T0/1-536 CKDRYYNCNV VVQARLCVYN YYKTACCVSC TRVANRHSGF LGSR BACU017947/1-853 CKDRYYNCNV VVQARLCVYN YYKTACCVSC TRVANRHSGF LGSR ENSTTRP00000008906/1-1017 CKDRYYNCNV VVQARLCVYN YYKTACCVSC TRVANRHSGF LGSR