KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:44 2014 Check: 00 .. Name: ENSBTAP00000053430/1-823 Len: 859 Check: 6293 Weight: 1.00 Name: ENSP00000225916/1-837 Len: 859 Check: 867 Weight: 1.00 Name: ENSTTRP00000006308/1-835 Len: 859 Check: 8257 Weight: 1.00 Name: BACU007077/1-807 Len: 859 Check: 9746 Weight: 1.00 Name: bmy_15674T0/1-842 Len: 859 Check: 1880 Weight: 1.00 // 1 50 ENSBTAP00000053430/1-823 MAEPSQASTP APAAQPRPLQ SPAPTPTPTP TLSPASAPTP APTPAPAPAP ENSP00000225916/1-837 MAEPSQAPTP APAAQPRPLQ SPAPAPTPTP APSPASAPIP TPTPAPAPAP ENSTTRP00000006308/1-835 MTEPSQASTP APAAQPRPLQ SPAPAPTPTP TLSPASAPTP APTPASAPAP BACU007077/1-807 MTEPSQASTP APAAQPRPLQ SPAPAPTPTP TLSPASAPTP APTPASAPAP bmy_15674T0/1-842 MTEPSQASTP APAAQPRPLQ SPAPAPTPTP TLSPASAPTP APTPASAPAP 51 100 ENSBTAP00000053430/1-823 ATAPAGSTGT GGPGVGSGGT --GSGGDPAR PGLSQQQRAS QRKAQVRGLP ENSP00000225916/1-837 AAAPAGSTGT GGPGVGSGGA --GSGGDPAR PGLSQQQRAS QRKAQVRGLP ENSTTRP00000006308/1-835 ATAPAGSTGT GGPGVGSGGT --GSGGDPAR PDLSQQQRAS QRKAQVRGLP BACU007077/1-807 ATAPAGSTGT GGPGVGSGGT GTGSGGDPAR PGLSQQQRAS QRKAQVRGLP bmy_15674T0/1-842 ATAPAGSTGT GGPGVGSGGT --GSGGDPAR PGLSQQQRAS QRKAQVRGLP 101 150 ENSBTAP00000053430/1-823 RAKKLEKLGV FSACKANETC KCNGWKNPKP PTAPRMDLQQ PAANLSELCR ENSP00000225916/1-837 RAKKLEKLGV FSACKANETC KCNGWKNPKP PTAPRMDLQQ PAANLSELCR ENSTTRP00000006308/1-835 RAKKLEKLGV FSACKANETC KCNGWKNPKP PTAPRMDLQQ PAANLSELCR BACU007077/1-807 RAKKLEKLGV FSACKANETC KCNGWKNPKP PTAPRMDLQQ PAANLSELCR bmy_15674T0/1-842 RAKKLEKLGV FSACKANETC KCNGWKNPKP PTAPRMDLQQ PAANLSELCR 151 200 ENSBTAP00000053430/1-823 SCEHPLADHV SHLENVSEDE INRLLGMVVD VENLFMSVHK EEDTDTKQVY ENSP00000225916/1-837 SCEHPLADHV SHLENVSEDE INRLLGMVVD VENLFMSVHK EEDTDTKQVY ENSTTRP00000006308/1-835 SCEHPLADHV SHLENVSEDE INRLLGMVVD VENLFMSVHK EEDTDTKQVY BACU007077/1-807 SCEHPLADHV SHLENVSEDE INRLLGMVVD VENLFMSVHK EEDTDTKQVY bmy_15674T0/1-842 SCEHPLADHV SHLENVSEDE INRLLGMVVD VENLFMSVHK EEDTDTKQVY 201 250 ENSBTAP00000053430/1-823 FYLFK----- LLRKCILQMT RPVVEGSLGS PPFEKPNIEQ GVLNFVQYKF ENSP00000225916/1-837 FYLFK----- LLRKCILQMT RPVVEGSLGS PPFEKPNIEQ GVLNFVQYKF ENSTTRP00000006308/1-835 FYLFK----- LLRKCILQMT RPVVEGSLGS PPFEKPNIEQ GVLNFVQYKF BACU007077/1-807 FYLFKVSFFQ LLRKCILQMT RPVVEGSLGS PPFEKPNIEQ GVLNFVQYKF bmy_15674T0/1-842 FYLFKVSFFQ LLRKCILQMT RPVVEGSLGS PPFEKPNIEQ GVLNFVQYKF 251 300 ENSBTAP00000053430/1-823 SHLAPRERQT MFELSKMFLL CLNYWKLETP AQFRQRSQAE DVATYKVNYT ENSP00000225916/1-837 SHLAPRERQT MFELSKMFLL CLNYWKLETP AQFRQRSQAE DVATYKVNYT ENSTTRP00000006308/1-835 SHLAPRERQT MFELSKMFLL CLNYWK-ETP AQFRQ-SQAE DVATYKVNYT BACU007077/1-807 SHLAPRERQT MFELSKMFLL CLNYWKLETP AQFRQRSQAE DVATYKVNYT bmy_15674T0/1-842 SHLAPRERQT MFELSKMFLL CLNYWKLETP AQFRQRSQAE DVATYKVNYT 301 350 ENSBTAP00000053430/1-823 RWLCYCHVPQ SCDSLPRYET THVFGRSLLR SIFTVTRRQL LEKFRVEKDK ENSP00000225916/1-837 RWLCYCHVPQ SCDSLPRYET THVFGRSLLR SIFTVTRRQL LEKFRVEKDK ENSTTRP00000006308/1-835 RWLCYCHVPQ SCDSLPRYET THVFGRSLLR SIFTVTRRQL LEKFRVEKDK BACU007077/1-807 RWLCYCHVPQ SCDSLPRYET THVFGRSLLR SIFTVTRRQL LEKFRVEKDK bmy_15674T0/1-842 RWLCYCHVPQ SCDSLPRYET THVFGRSLLR SIFTVTRRQL LEKFRVEKDK 351 400 ENSBTAP00000053430/1-823 LVPEKRTLIL THFPKLIRTL HHAHIRPVVP FFQGGFLDWS FFSLHEPSGI ENSP00000225916/1-837 LVPEKRTLIL THFPKFLSML EEEIYGANSP IWESG----- -FTMPPSEGT ENSTTRP00000006308/1-835 LVPEKRTLIL THFPKFLSML EEEIYGANSP IWESG----- -FTMPPSEGT BACU007077/1-807 LVPEKRTLIL THFPKFLSML EEEIYGANSP IWESG----- -FTMPPSEGT bmy_15674T0/1-842 LVPEKRTLIL THFPKFLSML EEEIYGANSP IWESG----- -FTMPPSEGT 401 450 ENSBTAP00000053430/1-823 WTSTWAACPR PKCNSLALCL F--VYWSFLL ---------- ---------- ENSP00000225916/1-837 -----QLVPR PASVSAAVVP STPIFSPSMG GGSNSSLSLD SAGAEPMP-- ENSTTRP00000006308/1-835 -----QLVPR PATVSAAVVP SAPIFSPTMA GGSNSSLSLD SGGAEPMP-- BACU007077/1-807 -----QLVPR PATVSAAVVP SAPIFSPTMA GGSNSSLSLD SGGAEPMPAS bmy_15674T0/1-842 -----QLVPR PATVNAAVVP SAPIFSPTMA GGSNSSLSLD SGGAEPMP-- 451 500 ENSBTAP00000053430/1-823 --RFFSVLPH CLFI-----L NVVHRYPQIL VNEVMLTITD PAAMLGPETS ENSP00000225916/1-837 --GEKRTLPE NLTLEDAKRL RVMGDIPMEL VNEVMLTITD PAAMLGPETS ENSTTRP00000006308/1-835 --GEKRKLPE NLTLEDAKRL RVMGDIPMEL VNEVMLTITD PAAMLGPETS BACU007077/1-807 SAGEKRKLPE NLTLEDAKRL RVMGDIPMEL VNEVMLTITD PAAMLGPETS bmy_15674T0/1-842 --GEKRKLPE NLTLEDAKRL RVMGDIPMEL VNEVMLTITD PAAMLGPETS 501 550 ENSBTAP00000053430/1-823 LLSANAARDE TARLEERRGI IEFHVIGNSL TPKANRRVLL WLVGLQNVFS ENSP00000225916/1-837 LLSANAARDE TARLEERRGI IEFHVIGNSL TPKANRRVLL WLVGLQNVFS ENSTTRP00000006308/1-835 LLSANAARDE TARLEERRGI IEFHVIGNSL TPKANRRVLM WLVGLQNVFS BACU007077/1-807 LLSANAARDE TARLEERRGI IEFHVIGNSL TPKANRRVLL WLVGLQNVFS bmy_15674T0/1-842 LLSANAARDE TARLEERRGI IEFHVIGNSL TPKANRRVLL WLVGLQNVFS 551 600 ENSBTAP00000053430/1-823 HQLPRMPKEY IARLVFDPKH KTLALIKDGR VIGGICFRMF PTQGFTEIVF ENSP00000225916/1-837 HQLPRMPKEY IARLVFDPKH KTLALIKDGR VIGGICFRMF PTQGFTEIVF ENSTTRP00000006308/1-835 HQLPRMPKEY IARLVFDPKH KTLALIKDGR VIGGICFRMF PTQGFTEIVF BACU007077/1-807 HQLPRMPKEY IARLVFDPKH KTLALIKDGR VIGGICFRMF PTQGFTEIVF bmy_15674T0/1-842 HQLPRMPKEY IARLVFDPKH KTLALIKDGR VIGGICFRMF PTQGFTEIVF 601 650 ENSBTAP00000053430/1-823 CAVTSNEQVK GYGTHLMNHL KEYHIKHNIL YFLTYADEYA IGYFKKQGFS ENSP00000225916/1-837 CAVTSNEQVK GYGTHLMNHL KEYHIKHNIL YFLTYADEYA IGYFKKQGFS ENSTTRP00000006308/1-835 CAVTSNEQVK GYGTHLMNHL KEYHIKHNIL YFLTYADEYA IGYFKKQGFS BACU007077/1-807 CAVTSNEQVK GYGTHLMNHL KEYHIKHNIL YFLTYADEYA IGYFKKQGFS bmy_15674T0/1-842 CAVTSNEQVK GYGTHLMNHL KEYHIKHNIL YFLTYADEYA IGYFKKQGFS 651 700 ENSBTAP00000053430/1-823 KDIKVPKSRY LGYIKDYEGA TLMECELNPR IPYTELSHII KKQKEIIKKL ENSP00000225916/1-837 KDIKVPKSRY LGYIKDYEGA TLMECELNPR IPYTELSHII KKQKEIIKKL ENSTTRP00000006308/1-835 KDIKVPKSRY LGYIKDYEGA TLMECELNPR IPYTELSHII KKQMSIIKKL BACU007077/1-807 KDIK------ ---------- ---------- ---------- -----IIKKL bmy_15674T0/1-842 KDIKVPKSRY LGYIKDYEGA TLMECELNPR IPYTELSHII KKQKEIIKKL 701 750 ENSBTAP00000053430/1-823 IERKQAQIRK VYPGLSCFKE GVRQIPVESV PGIRETGWKP LGKEKGKELK ENSP00000225916/1-837 IERKQAQIRK VYPGLSCFKE GVRQIPVESV PGIRETGWKP LGKEKGKELK ENSTTRP00000006308/1-835 IERKQAQIRK VYPGLSCFKE GVRQIPVESV PGIRETGWKP LGKEKGKELK BACU007077/1-807 IERKQAQIRK VYPGLSCFKE GVRQIPVESV PGIRETGWKP LGKEKGKELK bmy_15674T0/1-842 IERKQAQIRK VYPGLSCFKE GVRQIPVESV PGIRETGWKP LGKEKGKELK 751 800 ENSBTAP00000053430/1-823 DPDQLYTTLK NLLAQIKSHP SAWPFMEPVK KSEAPDYYEV IRFPIDLKTM ENSP00000225916/1-837 DPDQLYTTLK NLLAQIKSHP SAWPFMEPVK KSEAPDYYEV IRFPIDLKTM ENSTTRP00000006308/1-835 DPDQLYTTLK NLLAQIKSHP SAWPFMEPVK KSEAPDYYEV IRFPIDLKTM BACU007077/1-807 DPDQLYTTLK NLLAQIKSHP SAWPFMEPVK KSEAPDYYEV IRFPIDLKTM bmy_15674T0/1-842 DPDQLYTTLK NLLAQIKSHP SAWPFMEPVK KSEAPDYYEV IRFPIDLKTM 801 850 ENSBTAP00000053430/1-823 TERLRSRYYV TRKLFVADLQ RVIANCREYN PPDSEYCRCA SALEKFFYFK ENSP00000225916/1-837 TERLRSRYYV TRKLFVADLQ RVIANCREYN PPDSEYCRCA SALEKFFYFK ENSTTRP00000006308/1-835 TERLRSRYYV TRKLFVADLQ RVIANCREYN PPDSEYCRCA SALEKFFYFK BACU007077/1-807 TERLRSRYYV TRKLFVADLQ RVIANCREYN PPDSEYCRCA SALEKFFYFK bmy_15674T0/1-842 TERLRSRYYV TRKLFVADLQ RVIANCREYN PPDSEYCRCA SALEKFFYFK 851 900 ENSBTAP00000053430/1-823 LKEGGLIDK ENSP00000225916/1-837 LKEGGLIDK ENSTTRP00000006308/1-835 LKEGGLIDK BACU007077/1-807 LKEGGLIDK bmy_15674T0/1-842 LKEGGLIDK