KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:04:47 2014 Check: 00 .. Name: bmy_06616T0/1-190 Len: 350 Check: 8634 Weight: 1.00 Name: ENSBTAP00000053440/1-348 Len: 350 Check: 6541 Weight: 1.00 Name: ENSP00000281156/1-349 Len: 350 Check: 7601 Weight: 1.00 Name: ENSTTRP00000005275/1-348 Len: 350 Check: 7977 Weight: 1.00 // 1 50 bmy_06616T0/1-190 MLLTTAFSPG CMQQSVV--- TFFFTDSIM- -ELCFIPSRC GKMS------ ENSBTAP00000053440/1-348 -MEEEKYLPE LMAERDSLDP SFVHASRLLA EEIEKFQGSD GKSEDEEEKY ENSP00000281156/1-349 -MEEEKYLPE LMAEKDSLDP SFVHASRLLA EEIEKFQGSD GKKEDEEKKY ENSTTRP00000005275/1-348 -MKEEKYLPE LMAEKDSLDP SFVHASRLLA EEIEKFQGSD GKKEDEEKKY 51 100 bmy_06616T0/1-190 -VTISGGALS LELSSIVGIL KLDGTDVFAI CVGSSC---- -VSEYLTMKL ENSBTAP00000053440/1-348 LDVISNKNIK LSERVLIPVK QYPKFNFVGK LLGPRGNSLK RLQEETGAKM ENSP00000281156/1-349 LDVISNKNIK LSERVLIPVK QYPKFNFVGK LLGPRGNSLK RLQEETGAKM ENSTTRP00000005275/1-348 LDVISNKNIK LSERVLIPVK QYPKFNFVGK LLGPRGNSLK RLQEETGAKM 101 150 bmy_06616T0/1-190 EVW------- --QEEELRKS GEAKYAHLSD ELHVLIEVFA PPGEAYSRMS ENSBTAP00000053440/1-348 SILGKGSMRD KAKEEELRKS GEAKYAHLSD ELHVLIEVFA PPGEAYSRMS ENSP00000281156/1-349 SILGKGSMRD KAKEEELRKS GEAKYAHLSD ELHVLIEVFA PPGEAYSRMS ENSTTRP00000005275/1-348 SILGKGSMRD KAKEEELRKS GEAKYAHLSD ELHVLIEVFA PPGEAYSRMS 151 200 bmy_06616T0/1-190 HALEEIKKFL VPDY------ ----AFTFFD ---------- ---------- ENSBTAP00000053440/1-348 HALEEIKKFL VPDYNDEIRQ EQLRELSYLN GSEDSGRGRG VRGRGIRIAP ENSP00000281156/1-349 HALEEIKKFL VPDYNDEIRQ EQLRELSYLN GSEDSGRGRG IRGRGIRIAP ENSTTRP00000005275/1-348 HALEEIKKFL VPDYNDEIRQ EQLRELSYLN GSEDSGRGRG IKGRGIRIAP 201 250 bmy_06616T0/1-190 ---------- --PNDPAFQE IL-------- ---------- ---------- ENSBTAP00000053440/1-348 TAPSRGRGGA IPPPPPPGRG ILTPRGTTVT RGALPVPPIA RGVPTPRARG ENSP00000281156/1-349 TAPSRGRGGA IPPPPPPGRG VLTPRGSTVT RGALPVPPVA RGVPTPRARG ENSTTRP00000005275/1-348 TTPSRGRGGA IPPPPPPGRG VLTPRGTTVT RGALPVPPVA RGVPAPRARA 251 300 bmy_06616T0/1-190 ---------- ---------- ---------- FDPQT--TIA ELFAIVHQRV ENSBTAP00000053440/1-348 SPTMPGYRAP PLPAHKGYEA YGY-DGYGGE YDDEIYETYD NSYPIQAQSV ENSP00000281156/1-349 APTVPGYRAP PPPAHEAYEE YGYDDGYGGE YDDQTYETYD NSYATQTQSV ENSTTRP00000005275/1-348 SPTV-GYRAP PPPAHEEYEE YGYDDGYGGE YDDQTYETYD NSYATQAQSV 301 350 bmy_06616T0/1-190 PQ-------- ---------- -----VQYKI DVIGNEILRR G--------- ENSBTAP00000053440/1-348 PEYYDYGHGV SEDAYDSYAP EEWATTHSSL KAPPSRSARG GYREHPYGRY ENSP00000281156/1-349 PEYYDYGHGV SEDAYDSYAP EEWATTRSSL KAPPQRSARG GYREHPYGRY ENSTTRP00000005275/1-348 PEYYDYGHGV SEDAYDSYAP EEWAMTRSSL KAPPPRSARG GYREHPYSRY