KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:54 2014 Check: 00 .. Name: ENSTTRP00000013741/1-345 Len: 477 Check: 8231 Weight: 1.00 Name: bmy_04928T0/1-252 Len: 477 Check: 2828 Weight: 1.00 Name: ENSP00000453793/1-477 Len: 477 Check: 686 Weight: 1.00 Name: ENSBTAP00000053453/1-477 Len: 477 Check: 9274 Weight: 1.00 Name: BACU008548/1-457 Len: 477 Check: 9307 Weight: 1.00 // 1 50 ENSTTRP00000013741/1-345 MAQRYDELPH YGGMDGVGVP ASMYGDPHAP RPIPPVHHLN HGPPLHATQH bmy_04928T0/1-252 ---------- ---MDGVGVP ASMYGDPHAP RPIPPVHHLN HGPPLHATQH ENSP00000453793/1-477 MAQRYDELPH YGGMDGVGVP ASMYGDPHAP RPIPPVHHLN HGPPLHATQH ENSBTAP00000053453/1-477 MAQRYDELPH YGGMDGVGVP ASMYGDPHAP RPIPPVHHLN HGPPLHATQH BACU008548/1-457 ---------- ---MDGVGVP ASMYGDPHAP RPIPPVHHLN HGPPLHATQH 51 100 ENSTTRP00000013741/1-345 YGAHAPHPNV MPASMGSAVN DALKRDKDAI YGXXXXXXXX XXXXXXXXXX bmy_04928T0/1-252 YGAHAPHPNV MPASMGSAVN DALKRDKDAI YGHPLFPLLA LVFEKCELAT ENSP00000453793/1-477 YGAHAPHPNV MPASMGSAVN DALKRDKDAI YGHPLFPLLA LVFEKCELAT ENSBTAP00000053453/1-477 YGAHAPHPNV MPASMGSAVN DALKRDKDAI YGHPLFPLLA LVFEKCELAT BACU008548/1-457 YGAHAPHPNV MPASMGSAVN DALKRDKDAI YGHPLFPLLA LVFEKCELAT 101 150 ENSTTRP00000013741/1-345 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV RAEKPLFSSN PELDNLMIQA bmy_04928T0/1-252 CTPREPGVAG GDVCSSDSFN EDIAVFAKQV RAEKPLFSSN PELDNLMIQA ENSP00000453793/1-477 CTPREPGVAG GDVCSSDSFN EDIAVFAKQV RAEKPLFSSN PELDNLMIQA ENSBTAP00000053453/1-477 CTPREPGVAG GDVCSSDSFN EDIAVFAKQV RAEKPLFSSN PELDNLMIQA BACU008548/1-457 CTPREPGVAG GDVCSSDSFN EDIAVFAKQV RAEKPLFSSN PELDNLMIQA 151 200 ENSTTRP00000013741/1-345 IQVLRFHLLE LEKVHELCDN FCHRYISCLK GKMPIDLVID ERDGSSKSDH bmy_04928T0/1-252 IQVLRFHLLE LEKVHELCDN FCHRYISCLK GKMPIDLVID ERDGSSKSDH ENSP00000453793/1-477 IQVLRFHLLE LEKVHELCDN FCHRYISCLK GKMPIDLVID ERDGSSKSDH ENSBTAP00000053453/1-477 IQVLRFHLLE LEKVHELCDN FCHRYISCLK GKMPIDLVID ERDGSSKSDH BACU008548/1-457 IQVLRFHLLE LEKVHELCDN FCHRYISCLK GKMPIDLVID ERDGSSKSDH 201 250 ENSTTRP00000013741/1-345 EELSGSSTNL ADHNPASWRD HDDATSTHSA GTPGPSSGGH ASQSGDNSSE bmy_04928T0/1-252 EELSGSSTNL ADHNPASWRD HDDATSTHSA GTPGPSSGGH ASQSGDNSSE ENSP00000453793/1-477 EELSGSSTNL ADHNPSSWRD HDDATSTHSA GTPGPSSGGH ASQSGDNSSE ENSBTAP00000053453/1-477 EELSGSSTNL ADHNPASWRD HDDATSTHSA GTPGPSSGGH ASQSGDNSSE BACU008548/1-457 EELSGSSTNL ADHNPASWRD HDDATSTHSA GTPGPSSGGH ASQSGDNSSE 251 300 ENSTTRP00000013741/1-345 QGDGLDNSVA SPGTGDDDDP DKDKKRQKKR GIFPKVATNI MRAWLFQHLT bmy_04928T0/1-252 QG-------- ---------- -------KRS SILPV----- ---------- ENSP00000453793/1-477 QGDGLDNSVA SPGTGDDDDP DKDKKRQKKR GIFPKVATNI MRAWLFQHLT ENSBTAP00000053453/1-477 QGDGLDNSVA SPGTGDDDDP DKDKKRQKKR GIFPKVATNI MRAWLFQHLT BACU008548/1-457 QGDGLDNSVA SPGTGDDDDP DKDKKRQKKR GIFPKVATNI MRAWLFQHLT 301 350 ENSTTRP00000013741/1-345 HPYPSEEQKK QLAQDTGLTI LQVNNWFINA RRRIVQPMID QSNRA----- bmy_04928T0/1-252 ---------- ---------- ---------- ---------- QSGHD----- ENSP00000453793/1-477 HPYPSEEQKK QLAQDTGLTI LQVNNWFINA RRRIVQPMID QSNRAGFLLD ENSBTAP00000053453/1-477 HPYPSEEQKK QLAQDTGLTI LQVNNWFINA RRRIVQPMID QSNRAGFLLD BACU008548/1-457 HPYPSEEQKK QLAQDTGLTI LQVNNWFINA RRRIVQPMID QSNRA----- 351 400 ENSTTRP00000013741/1-345 ---------- ---------- ---------- ---------- ---------- bmy_04928T0/1-252 ---------- ---------- ---------- ---------- ---------- ENSP00000453793/1-477 PSVSQGAAYS PEGQPMGSFV LDGQQHMGIR PAGLQSMPGD YVSQGGPMGM ENSBTAP00000053453/1-477 PSVSQGAAYS PEGQPMGSFV LDGQQHMGIR PAGLQSMPGE YISQGGPMGM BACU008548/1-457 --VSQGAAYS PEGQPMGSFV LDGQQHMGIR PAGLQSMPGE YVSQGGPMGM 401 450 ENSTTRP00000013741/1-345 ---------- ---------- ---------- ---------- ---------- bmy_04928T0/1-252 ---------- ---------- ---------- ---------- ---------- ENSP00000453793/1-477 SMAQPSYTPP QMTPHPTQLR HGPPMHSYLP SHPHHPAMMM HGGPPTHPGM ENSBTAP00000053453/1-477 SMAQPSYTPP QMTPHPTQLR HGPPMHSYLP SHPHHPAMMM HGGPPTHPGM BACU008548/1-457 SMTQPSYTPP QMTPHPTQLR HGPPMHSYLP SHPHHPAMMM HGGPPSHPGM 451 500 ENSTTRP00000013741/1-345 ---------- ---------- ------- bmy_04928T0/1-252 ---------- ---------- ------- ENSP00000453793/1-477 TMSAQSPTML NSVDPNVGGQ VMDIHAQ ENSBTAP00000053453/1-477 TMSAQSPTML NSVDPNVGGQ VMDIHAQ BACU008548/1-457 TMSAQSPTML NSVDPNVGGQ VMDIHAQ