KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:55 2014 Check: 00 .. Name: bmy_01416T0/1-285 Len: 449 Check: 6293 Weight: 1.00 Name: ENSP00000257575/1-444 Len: 449 Check: 5029 Weight: 1.00 Name: ENSBTAP00000053457/1-449 Len: 449 Check: 2463 Weight: 1.00 Name: BACU018618/1-421 Len: 449 Check: 6169 Weight: 1.00 Name: ENSTTRP00000002258/1-448 Len: 449 Check: 8932 Weight: 1.00 // 1 50 bmy_01416T0/1-285 -------MVL RKMQRRHSSN TDNVPPERNR SQALSSEASV DEGGVFESLK ENSP00000257575/1-444 MWLFTVNQVL RKMQRRHSSN TDNIPPERNR SQALSSEASV DEGGVFESLK ENSBTAP00000053457/1-449 MWFLTVNQVL RKMQRRHSSN TENVPPERNR SQALSSEASV DEGGVFESLK BACU018618/1-421 ---------- ---------- -------RNR SQALSSEASV DEGGVFESLK ENSTTRP00000002258/1-448 LWFLTVNQVL RKMQRRHSSN TDNVPPERNR SQALSSEASV DEGGVFESLK 51 100 bmy_01416T0/1-285 AEAASPPALF SGLSGLPTGS LPATPFPSSL VLGAAAGGGD VFLQMPTSRE ENSP00000257575/1-444 AEAASPPALF SGLS----GS LPTSSFPSSL VLGSSAGGGD VFIQMPASRE ENSBTAP00000053457/1-449 AEAASPPALF SGLSGLPAGS LPTTPFPSSL VLGAAAGGGD VFLQMPASRE BACU018618/1-421 AEAASPPALF SGLSGLPTGS LPATPFPSSL VLGAAACGGD VFLEMPTSRE ENSTTRP00000002258/1-448 AEAASPPALF SGLSGLPTGS LPATPFPSSL VLGAAAGGGD VFLQMPTSRE 101 150 bmy_01416T0/1-285 EGGGRGEGGA Y-HHRQPHHH FHHGGHRGGS LLQHVGGDHR AHSDEAGDEQ ENSP00000257575/1-444 EGGGRGEGGA Y-HHRQPHHH FHHGGHRGGS LLQHVGGDHR GHSEEGGDEQ ENSBTAP00000053457/1-449 ESGGRGEGGA YHHHRQPHHH FHHGSHRGGS LLQHVGGDHR SHSDEAGDEQ BACU018618/1-421 EGGGRGEGGA Y-HHRQPHHH FHHGGHRGGS LLQHVGGDHR AHSDEAGDEQ ENSTTRP00000002258/1-448 EGGGRGEGGA Y-HHRQPHHH FHHGGHRGGS LLQHVGGDHR AHSDEAGDEQ 151 200 bmy_01416T0/1-285 PGTPAPALSE LKAVICWLQK GLPFILILLA KVCFQHKLDP FLLL------ ENSP00000257575/1-444 PGTPAPALSE LKAVICWLQK GLPFILILLA KLCFQHKLGI AVCIGMASTF ENSBTAP00000053457/1-449 PGTPAPALSE LKAVICWLQK GLPFILILLA KLCFQHKLGI AVCIGMASTF BACU018618/1-421 PGTPAPALSE LKAVICWLQK GLPFILILLA KVCFQHKLGI AVCIGMASTF ENSTTRP00000002258/1-448 PGTPAPALSE LKAVICWLQK GLPFILILLA KVCFQHKLGI AVCIGMASTF 201 250 bmy_01416T0/1-285 ---------- LEQQEKRSVL VILWILAFLA GNTLYVLYTF SSQQLYNSLI ENSP00000257575/1-444 AYANSTLREQ VSLKEKRSVL VILWILAFLA GNTLYVLYTF SSQQLYNSLI ENSBTAP00000053457/1-449 AYANSTLREQ VSLKEKRSVL VILWILAFLA GNTLYVLYTF SSQQLYNSLI BACU018618/1-421 AYANSTLREQ VSLKEKRSVL VILWILAFLA GNTLYVLYTF SSQQLYNSLI ENSTTRP00000002258/1-448 AYANSTLREQ VSLKEKRSVL VILWILAFLA GNTLYVLYTF SSQQLYNSLI 251 300 bmy_01416T0/1-285 FLKPNLETLD FFDLLWIVGI ADFVLKYITI ALKCLVVALP KIILAVKSK- ENSP00000257575/1-444 FLKPNLEMLD FFDLLWIVGI ADFVLKYITI ALKCLIVALP KIILAVKSKG ENSBTAP00000053457/1-449 FLKPNLETLD FFDLLWIVGI ADFVLKYITI ALKCLVVALP KIILAVKSKG BACU018618/1-421 FLKPNLETLD FFDLLWIVGI ADFVLKYITI ALKCLVVALP KIILAVKSKG ENSTTRP00000002258/1-448 FLKPNLETLD FFDLLWIVGI ADFVLKYITI ALKCLVVALP KIILAVKSKG 301 350 bmy_01416T0/1-285 ---------- ---------- ---------- ---------- ---------- ENSP00000257575/1-444 KFYLVIEELS QLFRSLVPIQ LWYKYIMGDD SSNSYFLGGV LIVLYSLCKS ENSBTAP00000053457/1-449 KFYLVIEEVS QLFRSLVPIQ LWYKYIMGDD SSNSYFLGGV LIVLYSLCKS BACU018618/1-421 KFYLVIEELS QLFRSLVPIQ LWYKYIMGDD ASNSYFLGGV LIVLYSLCKS ENSTTRP00000002258/1-448 KFYLVIEELS QLFRSLVPIQ LWYKYIMGDD ASNSYFLGGV LIVLYSLCKS 351 400 bmy_01416T0/1-285 ---------- ---------- ---------- ----VGPSCQ SCRG------ ENSP00000257575/1-444 FDICGRVGGV RKALKLLCTS QNYGVRATGQ QCTEAGDICA ICQAEFREPL ENSBTAP00000053457/1-449 FDICGRVGGV RKALKLLCTS QNYGVRATGQ QCTEAGDICA ICQAEFREPL BACU018618/1-421 FDICGRVGGV RKALKLLCTS QNYGVRATGQ QCTEAGDICA ICQAEFREPL ENSTTRP00000002258/1-448 FDICGRVGGV RKALKLLCTS QNYGVRATGQ QCTEAGDICA ICQAEFREPL 401 450 bmy_01416T0/1-285 ---------- ---------- ---------- ---------- --------- ENSP00000257575/1-444 ILLCQHVFCE ECLCLWLDRE RTCPLCRSVA VDTLRCWKDG ATSAHFQVY ENSBTAP00000053457/1-449 VLMCQHVFCE ECLCLWLDRE RTCPLCRSVA VDTLRCWKDG ATSAHFQVY BACU018618/1-421 ILMCQHVFCE ECLCLWLDRE RTCPLCRSVA VDTLRCWKDG ATSAHFQVY ENSTTRP00000002258/1-448 ILMCQHVFCE ECLCLWLDRE RTCPLCRSVA VDTLRCWKDG ATSAHFQVY