KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:56 2014 Check: 00 .. Name: ENSP00000412698/1-1030 Len: 1051 Check: 1589 Weight: 1.00 Name: bmy_11421T0/1-877 Len: 1051 Check: 5046 Weight: 1.00 Name: ENSBTAP00000053458/1-1051 Len: 1051 Check: 84 Weight: 1.00 Name: BACU012433/1-1004 Len: 1051 Check: 2065 Weight: 1.00 Name: ENSTTRP00000009381/1-1030 Len: 1051 Check: 8818 Weight: 1.00 // 1 50 ENSP00000412698/1-1030 ---------- ---------- -MAAAAAVEA AAPMGALWGL VHDFVVGQQE bmy_11421T0/1-877 ---------- ---------- ---------- ---------- -----MGKR- ENSBTAP00000053458/1-1051 CAERPGPCHR PLPLPRSPVR VMAAAAALEA VAPLGTLWGL VQDFVMGQQE BACU012433/1-1004 ---------- ---------- -MAAAAALEA VLPTGALWGL VQDFVMGQQE ENSTTRP00000009381/1-1030 ---------- ---------- -MAAAVALEA VAPTGALWGL VQDFVMGQQE 51 100 ENSP00000412698/1-1030 GPADQVAADV KSGNYTVLQV VEALGSSLEN PEPRTRARAI QLLSQVLLHC bmy_11421T0/1-877 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053458/1-1051 GPADQVAADV KSGSYTVLQV VEALGSSLEN PEPRTRARGI QLLSQVLLQC BACU012433/1-1004 GPADQVAADV KSGNYTVLQV VEALGSSLEN PEPRTRARGI QLLSQVLLQC ENSTTRP00000009381/1-1030 GPADQVAADV KSGSYTVLQV VEALGSSLEN PEPRTRARGI QLLSQVLLQC 101 150 ENSP00000412698/1-1030 HTLLLEKEVV HLILFYENRL KDHHLVIPSV LQGLKALSLC VALPPGLAVS bmy_11421T0/1-877 ---------I PVIFWW---- ---------- ---------- ---------- ENSBTAP00000053458/1-1051 HSLLLEKEVV HLILFYENRL KDHHLVIPSV LQGLRALSLC VTLPPGLAVS BACU012433/1-1004 HSLLLEKEVV HLILFYENRL KDHHLVIPSV LQGLRALSLC VALPPGLAVS ENSTTRP00000009381/1-1030 HSLLLEKEVV HLILFYENRL KDHHLVIPSV LQGLRALSLC VALPPGLAVS 151 200 ENSP00000412698/1-1030 VLKAIFQEVH VQSLPQVDRH TVYNIITNFM RTREEELKSL GADFTFGFIQ bmy_11421T0/1-877 ---------- ----PSASSM TSSAETIAWV HPCSLELAGW GL-------- ENSBTAP00000053458/1-1051 VLKAIFQEVH VQSLPQVDRH TVYSIITNFM RAREEELKGL GADFTFGFIQ BACU012433/1-1004 VLKAIFQEVH VQSLPQVDRH TVYSIITNFM RTREEELKGL GADFTFGFIQ ENSTTRP00000009381/1-1030 VLKAIFQEVH VQSLPQVDRH TVYSIITNFM RTREEELKGL GADFTFGFIQ 201 250 ENSP00000412698/1-1030 VMDGEKDPRN LLVAFRIVHD LISRDYSLGP FVEELFEVTS CYFPIDFTPP bmy_11421T0/1-877 -------PDE RLISSH---- --SFSVALGP FVEELFEVTS CYFPIDFTPP ENSBTAP00000053458/1-1051 VMDGEKDPRN LLVAFHIVYD LISRDYSLGP FVEELFEVTS CYFPIDFTPP BACU012433/1-1004 VMDGEKDPRN LLVAFCIVHD LISRDYSLGP FVEELFEVTS CYFPIDFTPP ENSTTRP00000009381/1-1030 VMDGEKDPRN LLVAFRIVHD LISRDYSLGP FVEELFEVTS CYFPIDFTPP 251 300 ENSP00000412698/1-1030 PNDPHGIQRE DLILSLRAVL ASTPRFAEFL LPLLIEKVDS EVLSAKLDSL bmy_11421T0/1-877 PNDPHGIQRE DLILSLRAVL ASTPRFAEFL LPLLIEKVDS EILSAKLDSL ENSBTAP00000053458/1-1051 PNDPHGIQRE DLILSLRAVL ASTPRFAEFL LPLLIEKVDS EILSAKLDSL BACU012433/1-1004 PNDPHGIQRE DLILSLRAVL ASTPRFAEFL LPLLIEKVDS EILSAKLDSL ENSTTRP00000009381/1-1030 PNDPHGIQRE DLILSLRAVL ASTPRFAEFL LPLLIEKVDS EILSAKLDSL 301 350 ENSP00000412698/1-1030 QTLNACCAVY GQKELKDFLP SLWASIRREV FQTASERVEA EGLAALHSLT bmy_11421T0/1-877 QTVNACCAVY GQKELKDFLP SLWASIRREV FQTASERVEA EGLAALNSLT ENSBTAP00000053458/1-1051 QTLNACCAVY GQKELKDFLP SLWASIRREV FQTASERVEA EGLAALNSLT BACU012433/1-1004 QTL------- ---------- ---------V FQTASERVEA EGLAALNSLT ENSTTRP00000009381/1-1030 QTLNACCAVY GQKELKDFLP SLWASIRREV FQTASERVEA EGLAALNSLT 351 400 ENSP00000412698/1-1030 ACLSRSVLRA DAEDLLDSFL SNILQDCRHH LCEPDMKLVW PSAKLLQAAA bmy_11421T0/1-877 ACLSRSVLRA DAEDLLDSFL SNILQDCRHH LCEPDMKLVW PSAKLLQAAA ENSBTAP00000053458/1-1051 ACLSRSVLRA DAEDLLDSFL SNILQDCRHH LCEPDMKLVW PSAKLLQAAA BACU012433/1-1004 ACLSRSVLRA DAEDLLDSFL SNILQDCRHH LCEPDMKLVW PSAKLLQAAA ENSTTRP00000009381/1-1030 ACLSRSVLRA DAEDLLDSFL SNILQDCRHH LCEPDMKLVW PSAKLLQAAA 401 450 ENSP00000412698/1-1030 GASARACDSV TSNVLPLLLE QFHKHSQSSQ RRTILEMLLG FLKLQQKWSY bmy_11421T0/1-877 GASARACDHI TSNVLPLLLE QFHKHSQSNQ RRTILEMILG FLKLQQKWSY ENSBTAP00000053458/1-1051 GASARACDHV TSNVLPLLLE QFHKHSQSNQ RRTILEMILG FLKLQQKWSY BACU012433/1-1004 GASARACDHI TSNVLPLLLE QFHKHSQSNQ RRTILEMILG FLKLQQKWSY ENSTTRP00000009381/1-1030 GASARACDHI TSNVLPLLLE QFHKHSQSNQ RRTILEMILG FLKLQQKWSY 451 500 ENSP00000412698/1-1030 EDKDQRPLNG FKDQLCSLVF MALTDPSTQL QLVGIRTLTV LGAQPDLLSY bmy_11421T0/1-877 EDKDERPLSG FKDQLCSLVF MALTDPSTQL QLVGIRTLTV LGAQPDLLSS ENSBTAP00000053458/1-1051 EDKDERPLSG FKDQLCSLMF MALTDPNTQL QLVGIRTLTV LGAQPDLLSS BACU012433/1-1004 EDKDERPLSG FKDQLCSLVF MALTDPSTQL QLVGIRTLTV LGAQPDLLSS ENSTTRP00000009381/1-1030 EDKDERPLSD FKDQLCSLVF MALTDPSTQL QLVGIRTLTV LGAQPDLLSS 501 550 ENSP00000412698/1-1030 EDLELAVGHL YRLSFLKEDS QSCRVAALEA SGTLAALYPV AFSSHLVPKL bmy_11421T0/1-877 GDLELAVGHL YRLSFLEEDS QSCRVAALEA SGTLATLYPV AFSSHLVPKL ENSBTAP00000053458/1-1051 GDLELAVGHL YRLSFLEEDS QSCRVAALEA SGTLATLYPM AFSSHLVPRL BACU012433/1-1004 GDLELAVGHL YRLSFLEEDS QSCRVAALEA SGTLATLYPA AFSSHLVPKL ENSTTRP00000009381/1-1030 GDLELAVGHL YRLSFLEEDS QSCRVAALEA SGTLATLYPV AFSSHLVPKL 551 600 ENSP00000412698/1-1030 AEELRVGESN LTNGDEPTQC SRHLCCLQAL SAVSTHPSIV KETLPLLLQH bmy_11421T0/1-877 AEELCIEESD LARGDGPTKC SRHRRCLQAL SAISTHASIV KETLPLLLQH ENSBTAP00000053458/1-1051 AEDLCTEESD LARADGPTRC SRHPRCLQAL SAISTHPSIV KETLPLLLQH BACU012433/1-1004 AEELCIEESD VARGDGPTKC SRHRRCLQAL SAISTHASIV KETLPLLLQH ENSTTRP00000009381/1-1030 AGELCIEESD LARGDGPTKC SRHRRCLQAL SAISTHASIV KETLPLLLQH 601 650 ENSP00000412698/1-1030 LWQVNRGNMV AQSSDVIAVC QSLRQMAEKC QQDPESCWYF HQTAIPCLLA bmy_11421T0/1-877 LCQMNKGNTV AGTSEVIAVC QSLQQVAEKC QQDPESCWYF HQTAIPCLLA ENSBTAP00000053458/1-1051 LCQMNRGSVS PGTSEVIAVC QSLQQVAENC QRDPESCWYF HQTAVPCLLA BACU012433/1-1004 LCQMNKGNTV AGTSEVIAIC QSLQQVAEKC QQDPESCWYF HQTAIPCLLA ENSTTRP00000009381/1-1030 LRQMNKGNTV AGTSEVIAVC QSLQQVAEKC QQDPESCWYF HQTAIPCLLA 651 700 ENSP00000412698/1-1030 LAVQASMPEK EPSVLRKVLL EDEVLAAMVS VIGTATTHLS PELAAQSVTH bmy_11421T0/1-877 LAVQASMPEK EHSVLKKVLL QDEVLAAMVS VIGTATTHLS PDLAAQSVAH ENSBTAP00000053458/1-1051 LVVQASAPEK EHSVLKKVLL EDEVLATMAS VIATATTHLS PDLASQSVAH BACU012433/1-1004 LAVQASMPEK EHSVLKKVLL QDEVLAAMVS VIGTATTHLN PDLAAQSVAH ENSTTRP00000009381/1-1030 LAVQASMPEK EHSVLKKVLL QDEVLAAMVS VIGTATTHLS PDLAAQSVAH 701 750 ENSP00000412698/1-1030 IVPLFLDGNV SFLPENSFPS RFQPFQDGSS GQRRLIALLM AFVCSLPRNV bmy_11421T0/1-877 IVPLFLDGNI SFLPENSFPG RFQPFQDGSS GQRRLVALLM AFVCSLPRNV ENSBTAP00000053458/1-1051 IVPLFLDGNI SFLPENSFSG RFQPFQDGSS GQRRLVALLM AFVCSLPRNV BACU012433/1-1004 IVPLFLDGNI SFLPENSFPG RFQPFQDGSS GQRRLVALLM AFVCSLPRNV ENSTTRP00000009381/1-1030 IVPLFLDGNI TFLPENSFPG RFQPFQDGSS GQRRLVALLM AFVCSLPRNV 751 800 ENSP00000412698/1-1030 EIPQLNQLMR ELLELSCCHS CPFSSTAAAK CFAGLLNKHP AGQQLDEFLQ bmy_11421T0/1-877 EIPQLNQLMR ELLELSCCHS CPFSSTAAAK CFAGLLNKHP AGQQLDEFLQ ENSBTAP00000053458/1-1051 EIPQLNRLMG ELLELSCCQS CPFSSTAAAK CFAGLLNKHP AGQQLDEFLQ BACU012433/1-1004 EIPQLNQLMR ELLELSCCHS CPFSSTAAAK CFAGLLNKHP AGQQLDEFLQ ENSTTRP00000009381/1-1030 EIPQLNQLMR ELLELSCCHS CPFSSTAAAK CFAGLLNKHP AGQQLDEFLQ 801 850 ENSP00000412698/1-1030 LAVDKVEAGL GSGPCRSQAF TLLLWVTKAL VLRYHPLSSC LTARLMGLLS bmy_11421T0/1-877 LAVDKVEAGL SSGPYRSQAF TLLLWVTKAL VLRYHPLSSC LTDRLMGLLS ENSBTAP00000053458/1-1051 LAVDKVEAGL SSGPCRSQAF TLLLWVTKAL VLRYHPLSSC LTERLMGLLS BACU012433/1-1004 LAVDKVEAGL SSGPYRSQAF TLLLWVTKAL VLRYHPLSSC LTDRLMGLLS ENSTTRP00000009381/1-1030 LAVDKVEAGL SSGPYRSQAF TLLLWVTKAL VLRYHPLSSC LTDRLMGLLS 851 900 ENSP00000412698/1-1030 DPELGPAAAD GFSLLMSDCT DVLTRAGHAE VRIMFRQRFF TDNVPALVQG bmy_11421T0/1-877 DPELGPAAAD GFSLLMSDCT DVLTRAGHAE VRIMFRQRFF TDNVPALVRS ENSBTAP00000053458/1-1051 DPELGPAAAD GFSLLMSDCT DVLTRAGHAE VRIMFRQRFF TDNVPALVRG BACU012433/1-1004 DPELGPAAAD GFSLLMSDCT DVLTRAGHAE VRIMFRQRFF TDNVPALVRG ENSTTRP00000009381/1-1030 DPELGPAAAD GFSLLMSDCT DVLTRAGHAE VRIMFRQRFF TDNVPALVRG 901 950 ENSP00000412698/1-1030 FHAAPQDVKP NYLKGLSHVL NRLPKPVLLP ELPTLLSLLL EALSCPDCVV bmy_11421T0/1-877 FHAAPRDVKP NYLKGLSHVL NRLPKPVLLP ELPTLLSLLL EALSCPDSVV ENSBTAP00000053458/1-1051 FHAAPQDVKP NYLKGLSHVL NRLPKPVLLP ELPTLLSLLL EALSCPDSVV BACU012433/1-1004 FHAAPRDVKP NYLKGLSHVL NRLPKPVLLP ELPTLLSLLL EALSCPDSVV ENSTTRP00000009381/1-1030 FHAAPRDVKP NYLKGLSHVL NRLPKPVLLP ELPTLLSLLL EALSCPDSVV 951 1000 ENSP00000412698/1-1030 QLSTLSCLQP LLLEAPQVMS LHVDTLVTKF LNLSSSPSMA VRIAALQCMH bmy_11421T0/1-877 QLSTLSCLQP LLLEAPQVMS LHVDTLVTKF LNLSSSPSMA VRIAALQCMH ENSBTAP00000053458/1-1051 QLSTLSCLQP LLLEAPQVMS LHVDTLITKF LNLSASPSMA VRIAALQCMH BACU012433/1-1004 QLSTLSCLQP LLLEAPQVMS LHIDTLVTKF LNLSSSPSMA VRIAALQCMH ENSTTRP00000009381/1-1030 QLSTLSCLQP LLLEAPQVMS LHVDTLVTKF LNLSSSPSMA VRIAALQCMH 1001 1050 ENSP00000412698/1-1030 ALTRLPTPVL LPYKPQVIRA LAKPLDDKKR LVRKEAVSAR GEWFLLGSPG bmy_11421T0/1-877 AVTHLPTPVL LPYKLQVIRA LAKPLDDKKR LVRKEAVSAR GEWFLLGSPG ENSBTAP00000053458/1-1051 ALTRLPTPVL LPYKPQVIRA LAKPLDDKKR LVRKEAVSAR GEWFLLGSPG BACU012433/1-1004 AVTHLPTPVL LPYKLQVIRA LAKPLDDKKR LVRKEAVSAR GEWFLLGSPG ENSTTRP00000009381/1-1030 AVTHLPTPVL LPYKLQVIRA LAKPLDDKKR LVRKEAVSAR GEWFLLGSPG 1051 1100 ENSP00000412698/1-1030 S bmy_11421T0/1-877 S ENSBTAP00000053458/1-1051 S BACU012433/1-1004 S ENSTTRP00000009381/1-1030 S