KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:57 2014 Check: 00 .. Name: bmy_06144T0/1-451 Len: 694 Check: 9035 Weight: 1.00 Name: ENSTTRP00000003171/1-658 Len: 694 Check: 9692 Weight: 1.00 Name: ENSP00000361663/1-686 Len: 694 Check: 687 Weight: 1.00 Name: ENSBTAP00000053461/1-289 Len: 694 Check: 3935 Weight: 1.00 Name: BACU010003/1-444 Len: 694 Check: 3881 Weight: 1.00 // 1 50 bmy_06144T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003171/1-658 ---------- ---------- --------DG CIDWSVDLKT YMALAGEPVR ENSP00000361663/1-686 MKPPFLLALV VCSVVSTNLK MVSKRNSVDG CIDWSVDLKT YMALAGEPVR ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_06144T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003171/1-658 VKCALFYSYI RTNYSMAQST GLRLMWYKNK GDLEEPIIFS EVRMSKEEDS ENSP00000361663/1-686 VKCALFYSYI RTNYSTAQST GLRLMWYKNK GDLEEPIIFS EVRMSKEEDS ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_06144T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003171/1-658 IWFHSAEAQD SGFYTCVLRN STYCMKVSMS LTVAENESGL CYNSRIRYLE ENSP00000361663/1-686 IWFHSAEAQD SGFYTCVLRN STYCMKVSMS LTVAENESGL CYNSRIRYLE ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 ---------- ---------- ---------- ---------- --------MK 151 200 bmy_06144T0/1-451 --MTTDSNRD SCRNVP---- ---------- ---------- ---------- ENSTTRP00000003171/1-658 KSEVTKRKEI SCPDMDDFKK SDQEPDVVWY KECKPKMWRS IIIQKGNALL ENSP00000361663/1-686 KSEVTKRKEI SCPDMDDFKK SDQEPDVVWY KECKPKMWRS IIIQKGNALL ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 GKEVVFNQVL TIR------- ---------- ---------- ---------- 201 250 bmy_06144T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003171/1-658 IQEVQEEDGG NYTCELKYEG KLVRRTTELK VTALLTDKPP KPLFPMENQP ENSP00000361663/1-686 IQEVQEEDGG NYTCELKYEG KLVRRTTELK VTALLTDKPP KPLFPMENQP ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_06144T0/1-451 -------GDS ANLTCRAFFG YSGDVSPLIY WMKGEKFIED LDENRVWESD ENSTTRP00000003171/1-658 SVIDVQLGKP LNIPCKAFFG FSGESGPMIY WMKGEKFIEE L-AGHIREGE ENSP00000361663/1-686 SVIDVQLGKP LNIPCKAFFG FSGESGPMIY WMKGEKFIEE L-AGHIREGE ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 -------SKP LNIPCKAFFG FSGESGPMIY WMKGEKFIEE L-AGHIREGE 301 350 bmy_06144T0/1-451 IRILKEHLGE QEVSISLIVD SVEEGDLGNY SCYVENGNGR RHASVLLHKR ENSTTRP00000003171/1-658 IRLLKEHLGE KEVELALIFD SVVEADLANY TCHVENRNGR KHASVLLRKK ENSP00000361663/1-686 IRLLKEHLGE KEVELALIFD SVVEADLANY TCHVENRNGR KHASVLLRKK ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- ---------- BACU010003/1-444 IRLLKEHLGE KEVELALIFD SVVEADLANY TCHVENRNGR KHASVLLRKK 351 400 bmy_06144T0/1-451 ELMYTVELAG GLGAILLLLV CLVTIYKCYK IEIMLFYRNH FGAEELDGDN ENSTTRP00000003171/1-658 DLIYKIELAG GLGAIFLLLV LLVVIYKCYN IELMLFYRQH FGGDETADDN ENSP00000361663/1-686 DLIYKIELAG GLGAIFLLLV LLVVIYKCYN IELMLFYRQH FGADETNDDN ENSBTAP00000053461/1-289 ---------- ---------- ---------- ---------- --------DN BACU010003/1-444 DLIYKIELAG GLGAIFLLLV LLVVIYKCYN IELMLFYRQH FGGDETADDN 401 450 bmy_06144T0/1-451 KDYDAYLSYT KVDPDQWNQE TGEEERFALE ILPDMLEKHY GYKLFIPDRD ENSTTRP00000003171/1-658 KEYDAYLSYT KVDQDTLECD NPEEEQFALE ILPDVLEKHY GYKLFIPERD ENSP00000361663/1-686 KEYDAYLSYT KVDQDTLDCD NPEEEQFALE VLPDVLEKHY GYKLFIPERD ENSBTAP00000053461/1-289 KEYDAYLSYT KVDQDTLDCD NPEEEQFALE ILPDVLEKHY GYKLFIPERD BACU010003/1-444 KEYDAYLSYT KVDQDTLECD NPEEEQFALE ILPDVLEKHY GYKLFIPERD 451 500 bmy_06144T0/1-451 LIPTGTYIED VARCVDQSKR LIIVMTPNYV VRRGWSIFEL ETRLRNMLVT ENSTTRP00000003171/1-658 LIPSGTYIED LTRCVEQSRR LIIVLTPDYI LRRGWSVFEL ESRLHNMLVS ENSP00000361663/1-686 LIPSGTYMED LTRYVEQSRR LIIVLTPDYI LRRGWSIFEL ESRLHNMLVS ENSBTAP00000053461/1-289 LIPSGTYVED LTRCVEQSRR LIIVLTPDYI LRRGWSIFEL ESRLHNMLVS BACU010003/1-444 LIPSGTYIED LTRCVEQSRR LIIVLTPDYI LRRGWSVFEL ESRLHNMLVS 501 550 bmy_06144T0/1-451 GEIKVILIEC SELRGIMNYQ EVEALKHTIK LLTVIKWHGP KCNKLNSKFW ENSTTRP00000003171/1-658 GEIKVILIEC TELKGKVNCQ EXXXXXXXXX XXXXXXXXXX XXXXXXXXVW ENSP00000361663/1-686 GEIKVILIEC TELKGKVNCQ EVESLKRSIK LLSLIKWKGS KSSKLNSKFW ENSBTAP00000053461/1-289 GEIKVILIEC TELKGKVNCQ EVESLKRSIK VLSLIKWKGP KSSKLNSKFW BACU010003/1-444 GEIKVILIEC TELKGKVNCQ EVESLKRSIK LLSLIKWKGP KSSKLNSKFW 551 600 bmy_06144T0/1-451 KRLQYEMPFK RIEPITHEQA LDVSEQGPFG ELQTVSAISM AAATSTALAT ENSTTRP00000003171/1-658 KHLVYEMPIR KKEMLSRCHV LDSAEQGLFG ELQPIPSIAM -TSTSASLVS ENSP00000361663/1-686 KHLVYEMPIK KKEMLPRCHV LDSAEQGLFG ELQPIPSIAM -TSTSATLVS ENSBTAP00000053461/1-289 KHLVYEMPTK KKEMLSRCHV LDSAEQGLFG ELQPIPSIAM -TNTSASLVS BACU010003/1-444 KHLVYEMPIR KKEMLSQCHV LDSAEQGLFG ELQPIPSIAM -TSTSASLVS 601 650 bmy_06144T0/1-451 AHPDLRSTFH NTYHSQMRQK HYYRSYEYDV PPTGTLPLTS IGNQHTYCNI ENSTTRP00000003171/1-658 SQADL-PDFH HS--DSMQMR HCCRGYKHEM PTT-TLPVPS LDNHHTYCNL ENSP00000361663/1-686 SQADL-PEFH PS--DSMQIR HCCRGYKHEI PAT-TLPVPS LGNHHTYCNL ENSBTAP00000053461/1-289 SQADL-PDFH HS--DSMQMR HCCRGYKQEM PTT-TLPVPS LGNHHTYCNL BACU010003/1-444 SQADL-PEFH HS--DSMQMR HCCRGYKHEM PTT-TLPVPS LGNHHTYCNL 651 700 bmy_06144T0/1-451 PMTLINGQRP QTKSSREQNP DEAHTNSAIL PLLPRETSIS SVIW ENSTTRP00000003171/1-658 PLTLLNGQLP LNNALKDT-- QEFHRNSSLL PLSSKELSFT SDIW ENSP00000361663/1-686 PLTLLNGQLP LNNTLKDT-- QEFHRNSSLL PLSSKELSFT SDIW ENSBTAP00000053461/1-289 PLTLLNGQLP LNNALKDN-- QEFHRNSSLL PLSSKEYSFT SDIW BACU010003/1-444 PPTLLNGQLP LNNALKDT-- QEFHRNSSLL PLSSKELSFT SDIW