KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:04:57 2014 Check: 00 .. Name: ENSTTRP00000006364/1-775 Len: 776 Check: 1830 Weight: 1.00 Name: ENSBTAP00000053463/1-697 Len: 776 Check: 765 Weight: 1.00 Name: bmy_04196T0/1-519 Len: 776 Check: 4762 Weight: 1.00 Name: BACU015387/1-520 Len: 776 Check: 4937 Weight: 1.00 // 1 50 ENSTTRP00000006364/1-775 MAAPPDPKEE LLPLASPGSQ WFGDRSEGEE EAVTPKGAKP EPQVGEPGPR ENSBTAP00000053463/1-697 ---------- ---------- ---------- ---------- ---------- bmy_04196T0/1-519 ---------- ---------- ---------- ---------- ---------- BACU015387/1-520 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006364/1-775 LGSEAREAAP RELGSGPARP PPVAMETAST GAADVSRAMD HTFSTAAKDG ENSBTAP00000053463/1-697 ---------- ---------- ---------I GASDVSRAMD HTFSTVAKDG bmy_04196T0/1-519 ---------- ---------- ---------- --------MD HTFSAAAKDG BACU015387/1-520 ---------- ---------- ---------- --------MD HTFSAAAKDG 101 150 ENSTTRP00000006364/1-775 EGVCYTSLIS DICYPPREDS TYFTGILQKE NSHITTSESP EELRTPGPSL ENSBTAP00000053463/1-697 EGVCYTSLIS DVYYPPREDA TYFTGILQKE NGHIAASESP EELRPPGPSL bmy_04196T0/1-519 EGVCYTSLVS DICYPPREDS TYFTGILQKE NSHITASESP AEMRTPGPSL BACU015387/1-520 EGVCYTSLVS DICYPPREDS TYFTGILQKE NSHITASESP AEMRTPGPSL 151 200 ENSTTRP00000006364/1-775 PDVPGMEPRG LFSSDSGIEM TPAESTEVNK ILADPLDQMK AEAYKYIDIT ENSBTAP00000053463/1-697 PDVPGTEPRG LFSSDSGIEM TPAESAEVNK ILADPLDQMK AEAYKYIDIT bmy_04196T0/1-519 PDVPGTEPRG LFSSDSGIEM TPAESTEVNT ILADPLDQMK AEAYKYIDIT BACU015387/1-520 PDVPGTEPRG LFSSDSRIEM TPAESTEVNT ILADPLDQMK AEAYKYIDIT 201 250 ENSTTRP00000006364/1-775 RPEEVKYQEQ RHPKLEEKDL DFKNKDTDIS AKSEEAHEAE KPSPVEGKIL ENSBTAP00000053463/1-697 RPEEVKYQEQ CHPKLEEKDL DFKNKDTEIS IRSEETREAE KPIPVEGKIL bmy_04196T0/1-519 RPEEVKYQEQ CHPKLEEKDL DF--KDTDIS AKSEEARAAE KPSPVEGKIL BACU015387/1-520 RPEEVKYQEQ RHPKLEEKDL DL-NKDTDIS AKSEEARAAE KPSPVEGKIL 251 300 ENSTTRP00000006364/1-775 KDHLFEESTF EPYVADISEA QHSAPLITAP VKITLTEIEP SVETATPEKT ENSBTAP00000053463/1-697 KDHLFEESTF APYVDNISEE QRSAPLMAAP VKITLTEIEP SIETATPEKT bmy_04196T0/1-519 KDHLFEESTS EPYVDDISEE RHGAPLITAP VRITLTEVEP SVETATPEKT BACU015387/1-520 KDHLFEESTS EPYVDDISEE RHSAPLITAP VRITLTEVEP SVETATPEKA 301 350 ENSTTRP00000006364/1-775 PEKQDICLKP SPDTVPTVTV SEPEDDSPGS VTPPSSGTXX XXXXXXXXXX ENSBTAP00000053463/1-697 PEKQDICLKP SPDTVPTVTV SEPEDDSPGS VTPPSSGTEP SAAESQGKCG bmy_04196T0/1-519 PEKQDVCLKP GPDTVPTVTV SEPEDDSPES VTPPSSGTEP SAAESQGKCS BACU015387/1-520 PEKQDVCLKP SPDTVPTVTV SEPEDDSPES VTPPSSGTEP SAAESQGKCS 351 400 ENSTTRP00000006364/1-775 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053463/1-697 ISEDELITAI KEAKGLSYET TESPRPAGQR AERPEAKARS GLPTIPSPLD bmy_04196T0/1-519 ISEDELITAI KEAKGLSFET TESPRPAGQV ADRPEAKARS GLPTIPSPLD BACU015387/1-520 ISEDELITAI KEAKGLSFET TESPRPAGQV ADRPEAKARS GLPTIPSPLD 401 450 ENSTTRP00000006364/1-775 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053463/1-697 HEASSAESGD SEIELVSEDP LAAEDALPSG YVTFGHVGGP PPSPASPSIQ bmy_04196T0/1-519 HEASSAESGD SEIELVSEDP LAAEDALPSG YVTFGHVGGP PPSPASPSIQ BACU015387/1-520 HEASSAESGD SEIELVSEDP LAAEDSLPSG YVTFGHGGGP PPSPASPSIQ 451 500 ENSTTRP00000006364/1-775 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053463/1-697 YSLLREEREA ELDSELIIES CDASSASEES PKREQDSPPM KPGALDAIRE bmy_04196T0/1-519 YSILREEREA ELDSELIIES CDASSASEES PKREQDSPPM KPGALDAIRE BACU015387/1-520 YSILREEREA ELDSELIIES CDASSASEES PKREQDSPPM KPGALDAIRE 501 550 ENSTTRP00000006364/1-775 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053463/1-697 EPGARAEERT PSRRGLAEQE PFLSFPSAAP RAGPELPSGD PAPAPEGPTA bmy_04196T0/1-519 EPGARAEERA HSRRGLAEPG PFLKFPSAAP QVCSELPSGD GAPAPEGPAV BACU015387/1-520 EPGARAEERA HSRRGLAEPG PFLKFPSAAP QVCSELPSGD GAPAPEGPAV 551 600 ENSTTRP00000006364/1-775 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI DLLYWRDIKQ ENSBTAP00000053463/1-697 PRTPVEAASS DQSSEATKAP GLRGPGVMPP LLFLNKQKAI DLLYWRDIKQ bmy_04196T0/1-519 PRTPVEAASY DQSSEATKGP APRGPGVAPP LLFLNKQQ-- ---------- BACU015387/1-520 PQTPVEAASY DQSSQATKGP GPRGPGVAPP LLFLNKQQ-- ---------- 601 650 ENSTTRP00000006364/1-775 TGIVFGSFLL LLFSLTQFSV VSVVAYLALA ALSATISFRI YKSVLQAVQK ENSBTAP00000053463/1-697 TGIVFGSFLL LLFSLTQFSV VSVVAYLALA ALSATISFRI YKSVLQAVQK bmy_04196T0/1-519 -----EVFCL LGIN------ ---------- ---------- ---------- BACU015387/1-520 -----GNVTA FLIK------ ---------- ---------- ---------- 651 700 ENSTTRP00000006364/1-775 TDEGHPFKAY LELEITLSQE QIQKYTDCLQ FYVNNTLKEL RRLFLVQDLV ENSBTAP00000053463/1-697 TDEGHPFKAY LELEITLSQE QIQKYTDCLQ FYVNNTLKEL RRLFLVQDLV bmy_04196T0/1-519 ---------- ---------- ---------- ---------- ---------- BACU015387/1-520 ---------- ---------- -----VGCL- ---------- ---------- 701 750 ENSTTRP00000006364/1-775 DSLKFAVLMW LLTYVGALFN GLTLLLMAVV SMFTLPVVYV KHQAQIDQYL ENSBTAP00000053463/1-697 DSLKFAVLMW LLTYVGALFN GLTLLLMAVV SMFTLPVVYV KHQAQIDQYL bmy_04196T0/1-519 DSESTPSFLF IC-------- ---------- ---------- ---------- BACU015387/1-520 ----LTVLPW VL-------- ---------- ---------- ---------- 751 800 ENSTTRP00000006364/1-775 GLVRTHINAV VAKIQAKI-G AKRHTE ENSBTAP00000053463/1-697 GLVRTHINAV VAKIQAKIPG AKRHTE bmy_04196T0/1-519 ---------- ---------- ------ BACU015387/1-520 ---------- ---------- ------