KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:58 2014 Check: 00 .. Name: ENSTTRP00000009077/1-589 Len: 673 Check: 3285 Weight: 1.00 Name: ENSP00000433511/1-589 Len: 673 Check: 1810 Weight: 1.00 Name: ENSBTAP00000053464/1-597 Len: 673 Check: 4098 Weight: 1.00 Name: BACU002882/1-609 Len: 673 Check: 7721 Weight: 1.00 Name: bmy_08373T0/1-624 Len: 673 Check: 4007 Weight: 1.00 // 1 50 ENSTTRP00000009077/1-589 ---------- ---------- ---------- ---------- ---------- ENSP00000433511/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053464/1-597 ---------- ---------- ---------- ---------- ---------- BACU002882/1-609 ---------- ---------- ---------- ---------- ---------- bmy_08373T0/1-624 SARRAAAAGE AREAAARSLR AEPSRADRHP APAPSSNPGR WRGPAGPAAP 51 100 ENSTTRP00000009077/1-589 --MELENIVA NTVLXXXXXX GGGNRKGKSK KWRQMLQFPH ISQCEELRLN ENSP00000433511/1-589 --MELENIVA NTVLLKAREG GGGNRKGKSK KWRQMLQFPH ISQCEELRLS ENSBTAP00000053464/1-597 --MELENIVA NTVLLKAREG GGGNRKGKSK KWRQMLQFPH ISQCEELRLS BACU002882/1-609 --MELENIVA NTVLLKAREG GGGNRKGKSK KWRQMLQFPH ISQCEELRLS bmy_08373T0/1-624 QPMELENIVA NTVLLKAREG GGGNRKGKSK KWRQMLQFPH ISQCEELRLS 101 150 ENSTTRP00000009077/1-589 IECDYHSLCK RQPIGRLLFR EFCATRPELT RCIAFLDGVA DYEVTPDEKR ENSP00000433511/1-589 LERDYHSLCE RQPIGRLLFR EFCATRPELS RCVAFLDGVA EYEVTPDDKR ENSBTAP00000053464/1-597 LERDYHSLCE RQPIGRLLFR EFCATRPELT RCIAFLDGVA EYEVTPDEKR BACU002882/1-609 LERDYHSLCE RQPIGRLLFR EFCTTRPELT RCIAFLDGVA EYEVTPDEKR bmy_08373T0/1-624 LERDYHSLCE RQPIGRLLFR EFCATRPELT RCIAFLDGVA EYEVTPDEKR 151 200 ENSTTRP00000009077/1-589 KECGWRLMQN FLSHTGPDLI PDVPRQLVTN CAQRLEQGPC KDLFQELTRL ENSP00000433511/1-589 KACGRQLTQN FLSHTGPDLI PEVPRQLVTN CTQRLEQGPC KDLFQELTRL ENSBTAP00000053464/1-597 KACGLRLMQN FLSHTGPDLI PEVPRQLVTN CAQRLEEGPC KDLFQELTRL BACU002882/1-609 KECGRRLMQN FLSHTGPDLI PEVPRQLVTN CAQRLEQGPC KDLFQELTRL bmy_08373T0/1-624 KECGRRLMQN FLSHTGPDLI PEVPRQLVTN CAQRLEQGPC KDLFQELTRL 201 250 ENSTTRP00000009077/1-589 THEYLSVAPY TDYLDSIYFN RFLQWKWLER QPVTKNTFRQ YRVLGKGGFG ENSP00000433511/1-589 THEYLSVAPF ADYLDSIYFN RFLQWKWLER QPVTKNTFRQ YRVLGKGGFG ENSBTAP00000053464/1-597 THEYLSMAPF ADYLDSIYFN RFLQWKWLER QPVTKNTFRQ YRVLGKGGFG BACU002882/1-609 THEYLSVAPF ADYLDSIYFN RFLQWKWLER QPVTKNTFRQ YRVLGKGGFG bmy_08373T0/1-624 THEYLSVAPF ADYLDSIYFN RFLQWKWLER QPVTKNTFRQ YRVLGKGGFG 251 300 ENSTTRP00000009077/1-589 EV-------- ----CACQVR ATGKMYACKK LEKKRIKKRK GEAMALNEKQ ENSP00000433511/1-589 EV-------- ----CACQVR ATGKMYACKK LEKKRIKKRK GEAMALNEKQ ENSBTAP00000053464/1-597 EVSG------ ----MRCQVR ATGKMYACKK LEKKRIKKRK GEAMALNEKQ BACU002882/1-609 EV-------- ----CACQVR ATGKMYACKK LEKKRIKKRK GEAMALNEKQ bmy_08373T0/1-624 EVSGQARAQQ SAEVCACQVR ATGKMYACKK LEKKRIKKRK GEAMALNEKQ 301 350 ENSTTRP00000009077/1-589 ILEKVNSRFV VSLAYAYETK DALCLVLTLM NGGDLKFHIY HMGQAGFPEA ENSP00000433511/1-589 ILEKVNSRFV VSLAYAYETK DALCLVLTLM NGGDLKFHIY HMGQAGFPEA ENSBTAP00000053464/1-597 ILEKVNSRFV VSLAYAYETK DALCLVLTLM NGGDLKFHIY HMGQAGFPEA BACU002882/1-609 ILEKVNSRFV VSLAYAYETK DALCLVLTLM NGGDLKFHIY HMGQAGFPEA bmy_08373T0/1-624 ILEKVNSRFV VSLAYAYETK DALCLVLTLM NGGDLKFHIY HMGQAGFPEA 351 400 ENSTTRP00000009077/1-589 RAVFYAAEIC CGLEDLHRER IVYRDLKPEN ILLDDHGHIR ISDLGLAVHV ENSP00000433511/1-589 RAVFYAAEIC CGLEDLHRER IVYRDLKPEN ILLDDHGHIR ISDLGLAVHV ENSBTAP00000053464/1-597 RAVFYAAEIC CGLEDLHRER IVYRDLKPEN ILLDDHGHIR ISDLGLAVHV BACU002882/1-609 RAVFYAAEIC CGLEDLHRER IVYRDLKPEN ILLDDHGHIR ISDLGLAVHV bmy_08373T0/1-624 RAVFYAAEIC CGLEDLHRER IVYRDLKPEN ILLDDHGHIR ISDLGLAVHV 401 450 ENSTTRP00000009077/1-589 PEGQTIKGRV GTVGYMAPEV VKNERYTFSP DWWALGCLLY EMIAGQSPFQ ENSP00000433511/1-589 PEGQTIKGRV GTVGYMAPEV VKNERYTFSP DWWALGCLLY EMIAGQSPFQ ENSBTAP00000053464/1-597 PEGQTIKGRV GTVGYMAPEV VKNERYTFSP DWWALGCLLY EMIAGQSPFQ BACU002882/1-609 PEGQTIKGRV GTVGYMAPEV VKNERYTFSP DWWALGCLLY EMIAGQSPFQ bmy_08373T0/1-624 PEGQTIKGRV GTVGYMAPEV VKNERYTFSP DWWALGCLLY EMIAGQSPFQ 451 500 ENSTTRP00000009077/1-589 QRKKKIKREE VERLVKEVPE EYSEHFSPQA RSLCSQLLCK DPAERLGCGG ENSP00000433511/1-589 QRKKKIKREE VERLVKEVPE EYSERFSPQA RSLCSQLLCK DPAERLGCRG ENSBTAP00000053464/1-597 QRKKKIKREE VERLVKEVPE EYSEHFSPQA RSLCTQLLCK DPSERLGCGG BACU002882/1-609 QRKKKIKREE VERLVKEVPE EYPEHFSPQA RSLCSQLLCK DPAERLGCGG bmy_08373T0/1-624 QRKKKIKREE VERLVKEVPE EYSEHFSPQA RSLCSQLLCK DPAERLGCGG 501 550 ENSTTRP00000009077/1-589 GGAREVKEHP LFKKLNFKRL GAGMLEPPFK PDPQAIYCKD VLDIEQFSTV ENSP00000433511/1-589 GSAREVKEHP LFKKLNFKRL GAGMLEPPFK PDPQAIYCKD VLDIEQFSTV ENSBTAP00000053464/1-597 GGAQEVKEHP LFKKLNFKRL GAGMLEPPFK PDPQAIYCKD VLDIEQFSTV BACU002882/1-609 AGAREVKEHP LFKKLNFKRL GAGMLEPPFK PDPQAIYCKD VLDIEQFSTV bmy_08373T0/1-624 AGAREVKEHP LFKKLNFKRL GAGMLEPPFK PDPQAIYCKD VLDIEQFSTV 551 600 ENSTTRP00000009077/1-589 KGVELEATDQ DFYQKFATGS VSIPWQNEMV ETECFQELNV FGLDGSVPPD ENSP00000433511/1-589 KGVELEPTDQ DFYQKFATGS VPIPWQNEMV ETECFQELNV FGLDGSVPPD ENSBTAP00000053464/1-597 KGVELEPTDQ DFYQKFATGS VPIPWQNEMV ETECFQELNV FGLDGSVPPD BACU002882/1-609 KGVELEATDQ DFYQKFATGS VSIPWQNEMV ETECFQELNV FGLDGSVPPD bmy_08373T0/1-624 KGVELEATDQ DFYQKFATGS VSIPWQNEMV ETECFQELNV FGLDGSVPPD 601 650 ENSTTRP00000009077/1-589 LDWKGQPPAP PKKGLLQRLF SRQRTAVGTA ATVRKSSPPA S--------S ENSP00000433511/1-589 LDWKGQPPAP PKKGLLQRLF SRQRIAVETA ATARKSSPPA S--------S ENSBTAP00000053464/1-597 LDWKGQPPAP PKKGLLQRLF SRQRTAVETA ATVRKSFPPA SSSPPAS--S BACU002882/1-609 LDWKGQPPAP PKKGLLQRLF SRQAQEKGTG TGTNGTWHKA VTESERSHLG bmy_08373T0/1-624 LDWKGQPPAP PKKGLLQRLF SRQR------ ---------- ---------- 651 700 ENSTTRP00000009077/1-589 PQPEAPPGGW R--------- --- ENSP00000433511/1-589 PQPEAPTSSW R--------- --- ENSBTAP00000053464/1-597 PQPGAPPGGW R--------- --- BACU002882/1-609 EKCGVARVAW LPPSLLSDQS KST bmy_08373T0/1-624 ---------- ---------- ---