KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:05:01 2014 Check: 00 .. Name: ENSTTRP00000002157/1-866 Len: 923 Check: 6933 Weight: 1.00 Name: ENSP00000378235/1-866 Len: 923 Check: 9138 Weight: 1.00 Name: ENSBTAP00000053475/1-868 Len: 923 Check: 2111 Weight: 1.00 Name: bmy_11577T0/1-823 Len: 923 Check: 1511 Weight: 1.00 Name: BACU005573/1-785 Len: 923 Check: 9363 Weight: 1.00 // 1 50 ENSTTRP00000002157/1-866 MNGEQQIDAD AGSGVEEVEL SWEDYLEETG STAVPYGSFK HVDTRLQNGF ENSP00000378235/1-866 MNGEQQLDAD AGSGMEEVEL SWEDYLEETG STAVPYGSFK HVDTRLQNGF ENSBTAP00000053475/1-868 MNGEQQTDAD AGSGVEEVEL SWEDYLEETG STAVPYGSFK HVDTRLQNGF bmy_11577T0/1-823 ---------- ---------- -----MEQSS IASPCFVWIT PVDTRLQNGF BACU005573/1-785 MNGEQQIDAD AGSGVEEVEL SWEDYLEETG STAVPYGSFK HVDTRLQNGF 51 100 ENSTTRP00000002157/1-866 APGMKLEVVV KTDPETYWVA TIITTCEQLL LLRYDGYGED RRADFWCDIR ENSP00000378235/1-866 APGMKLEVAV RTDPETYWVA TVITTCEQLL LLRYDGYGED RRADFWCDIR ENSBTAP00000053475/1-868 APGMKLEVAV KTDPETYWVA TIITTCEQLL LLRYDGYGED RRADFWCDIR bmy_11577T0/1-823 APGMKLEVVV KTDPETYWVA TIITTCEQLL LLRYDGYGED RRADFWCDIR BACU005573/1-785 APGMKLEVVV KTDPETYWVA TIITTCEQLL LLRYDGYGDD RRADFWCDIR 101 150 ENSTTRP00000002157/1-866 KADLYPIGWC EQNKKTLEAP EGIRDKVSDL DEFLRQTLMG ACSPPVPLLE ENSP00000378235/1-866 KADLYPIGWC EQNKKTLEAP EGIRDKVSDW DEFLRQTLIG ACSPPVPLLE ENSBTAP00000053475/1-868 KADLYPIGWC EQNKKTLEAP EGIRDKVSDW DEFLRQTLTG ACSPPVPLLE bmy_11577T0/1-823 KADLYPIGWC EQNKKTLEAP EGIRDKVSDR DEFLRQTLMG ACSPPVPLLE BACU005573/1-785 KADLYPIGWC EQNKKTLEAP EGIRDKVSDR DEFLRQTLMG ACSPPVPLLE 151 200 ENSTTRP00000002157/1-866 GLRNGRNPLD LIAPGSRLEC QAFQESLSTW IVTVVDNIGG RLKLRYEGLE ENSP00000378235/1-866 GLRNGRNPLD LIAPGSRLEC QAFQDSLSTW IVTVVENIGG RLKLRYEGLE ENSBTAP00000053475/1-868 GLRNGRNPLD LIAPGSRLEC QAFQDSLSTW IVTVVDNIGG RLKLRYEGLE bmy_11577T0/1-823 GLRNGRNPLD LIAPGSRLEC QAFQDSLSTW IVTVVDNIGG RLKLRYEGLE BACU005573/1-785 GLRNGRNPLD LIAPGSRLEC QAFQDSLSTW IVTVVDNIGG RLKLRYEGLE 201 250 ENSTTRP00000002157/1-866 SSDNFEHWLY YLDPFLHHVG WAAQQGYELQ PPSAIRHLKT EVEWQEILAK ENSP00000378235/1-866 SSDNYEHWLY YLDPFLHHVG WAAQQGYELQ PPSAIRHLKN EAEWQEILAK ENSBTAP00000053475/1-868 GSDNVEHWLY YLDPFLHHVG WAAQQGYELQ PPSAIRHLKN EAEWQEILAK bmy_11577T0/1-823 SSDNFEHWLY YLDPFLHYVG WAAQQGYELQ PPSAIRHLKT EVEWQEILAK BACU005573/1-785 SSDNFEHWLY YLDPFLHYVG WAAQQGYELQ PPSAIRHLKT EVEWQEILAK 251 300 ENSTTRP00000002157/1-866 VKEEEEEPLP SYLFKDKQVI GAHSFSVNMK LEAVDPWSPF GISPATIVKV ENSP00000378235/1-866 VKEEEEEPLP SYLFKDKQVI GIHTFSVNMK LEAVDPWSPF GISPATVVKV ENSBTAP00000053475/1-868 VKEEEE-PLP SYLFKDKRVI GTHSFSVNMK LEAVDPWSPF GISPATVVKV bmy_11577T0/1-823 VKEEEEEPLP SYLFKDKQVI GTHSFSVNMK LEAVDPWSPF GISPATIVK- BACU005573/1-785 VKEEEEEPLP SYLFKDKQVI GTHSFSVNMK LEAVDPWSPF GISPATIVKV 301 350 ENSTTRP00000002157/1-866 FDEKYFLVEM DDLRPENRAQ RSFVCHADSP GIFPVQWGLK NGLHISPPPX ENSP00000378235/1-866 FDEKYFLVEM DDLRPENHAR RSFVCHADSP GIFPVQWSLK NGLHISPPPG ENSBTAP00000053475/1-868 FDEKYFLVEM DDLRLENRGQ RSFVCHTDSP GIFPVQWSLK NGLHISPPPG bmy_11577T0/1-823 ---------- ---------- ---------- ------WGLK NGLHISPPPG BACU005573/1-785 FDEKYFLVEM DDLRPENRAQ RSFVCHADSP GIFPVQWGLK NGLHISPPPG 351 400 ENSTTRP00000002157/1-866 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---------- ---------- ENSP00000378235/1-866 YPSQDFDWAD YLKQCGAEAA PQRCFPP--- ---------- ---------- ENSBTAP00000053475/1-868 YQGQDFDWAD YLKQCGAEAA PQRCFPP--- ---------- ---------- bmy_11577T0/1-823 YPGQDFDWAD YLKQCGAEAA PQRCFPPVRI LSPQGHCFGA AGDCCASLAV BACU005573/1-785 YPGQDFDWAD YLKQCGAEAA PQRCFPP--- ---------- ---------- 401 450 ENSTTRP00000002157/1-866 ---------- -------SIS EHEFKENMKL EAVNPLLPEE VCVATITAVR ENSP00000378235/1-866 ---------- -------LIS EHEFKENMKL EAVNPILPEE VCVATITAVR ENSBTAP00000053475/1-868 ---------- -------SIS EHEFKENMKL EAVNPLLPEE VCVATITAVR bmy_11577T0/1-823 MMFTLKPVLS CNPKTPLSIS EHEFKENMKL EAVNPLLPEE VCVATVTAVR BACU005573/1-785 ---------- -------SIS EHEFKENMKL EAVNPLLPEE VCVATITAVR 451 500 ENSTTRP00000002157/1-866 GSYLWLQLEG SKKPIPEFIV NVESMDIFPL GWCETNGHPL STPRRARVHK ENSP00000378235/1-866 GSYLWLQLEG SKKPIPECIV SVESMDIFPL GWCETNGHPL STPRRARVYK ENSBTAP00000053475/1-868 GSYLWLQLEG SKKPIPEFIV NVESMDIFPL GWCETNGHPL STPRRARVHK bmy_11577T0/1-823 GSYLWLQLE- ---------- ---------- ---------- -------VHK BACU005573/1-785 GSYLWLQLE- ---------- ---------- ---------- -------VHK 501 550 ENSTTRP00000002157/1-866 QRKVAVVQPE KQIPSSRTVH EGLKNQELSS TDSVMINGKY CCPKIYFNHR ENSP00000378235/1-866 QRKIAVVQPE KQVPSSRTVH EGLRNQELNS TESVMINGKY CCPKIYFNHR ENSBTAP00000053475/1-868 QRKIAVVQPE KQIPSSRTVH EGLKNQELSS TDSVVINGKY CCPKIYFNHR bmy_11577T0/1-823 QRKIAVVQPE KQVPSSRTVH EGLKNQELSS TDSVMINGKY CCPKIYFNHR BACU005573/1-785 QRKIAVVQPE KQVPSSRTVH EGLKNQELSS TDSVMINGKY CCPKIYFNHR 551 600 ENSTTRP00000002157/1-866 CFSGPYLNKG RIAELPQCVG PGNCVLVLRE VLTLLINAAY KPSRVLRELQ ENSP00000378235/1-866 CFSGPYLNKG RIAELPQCVG PGNCVLVLRE VLTLLINAAY KPSRVLRELQ ENSBTAP00000053475/1-868 CFSGPYLNKG RIAELPQCVG PGNCVLVLRE VLTLLINAAY KPSRVLRELQ bmy_11577T0/1-823 CFSGPYLNKG RIAELPQCVG PGNCVLVLRE VLTLLINAAY KPSRVLRELQ BACU005573/1-785 CFSGPYLNKG RIAELPQCVG PGNCVLVLRE VLTLLINAAY KPSRVLRELQ 601 650 ENSTTRP00000002157/1-866 LDKDSVWHGC GEVLKAKYKG KSYRATVEIV KTADRVTEFC RQTCIKLECC ENSP00000378235/1-866 LDKDSVWHGC GEVLKAKYKG KSYRATVEIV KTADRVTEFC RQTCIKLECC ENSBTAP00000053475/1-868 LDKDSVWHGC GEVLKAKYKG KSYRATVEIV KTADRVTEFC RQTCIKLECC bmy_11577T0/1-823 LDKDSVWHGC GEVLKAKYKG KSYRATVEIV KTADRVTEFC RQTCIKLECC BACU005573/1-785 LDKDSVWHGC GEVLKAKYKG KSYRATVEIV KTADRVTEFC RQTCIKLECC 651 700 ENSTTRP00000002157/1-866 PNLFGPRMVL DKCSENCSVL TKTKYTHYYG KKKNKRIGRP PGGHSNLACA ENSP00000378235/1-866 PNLFGPRMVL DKCSENCSVL TKTKYTHYYG KKKNKRIGRP PGGHSNLACA ENSBTAP00000053475/1-868 PNLFGPRMVL DKCSENCSVL TKTKYTHYYG KKKNKRIGRP PGGHSNLACA bmy_11577T0/1-823 PNLFGPRMVL DKCSENCSVL TKTKYTHYYG KKKNKRIGRP PGGHSNLACA BACU005573/1-785 PNLFGPRMVL DKCSENCSVL TKTKYTHYYG KKKNKRIGRP PGGHSNLACA 701 750 ENSTTRP00000002157/1-866 LKKASKRRKR RKNVFVHKKK RSSASVDNTP AGSPQGSGGE DEDDPDEGDD ENSP00000378235/1-866 LKKASKRRKR RKNVFVHKKK RSSASVDNTP AGSPQGSGGE DEDDPDEGDD ENSBTAP00000053475/1-868 LKKASKRRKR RKNVFVHKKK RSSASVDNTP AGSPQGSGGE DEEDPDEGDD bmy_11577T0/1-823 LKKASKRRKR RKNVFVHKKK RSSASVDNTP AGSPQGSGGE DEDDPDEGDD BACU005573/1-785 LKKASKRRKR RKNVFVHKKK RSSASVDNTP AGSPQGSGGE DEDDPDEGDD 751 800 ENSTTRP00000002157/1-866 DSLSEGSTSE QQDELQEESE MSEKKSCSSS PTQSEISTSL PPDRQRRKRE ENSP00000378235/1-866 DSLSEGSTSE QQDELQEESE MSEKKSCSSS PTQSEISTSL PPDRQRRKRE ENSBTAP00000053475/1-868 DSLSEGSTSE QQDELQEESE MSEKKSCSSS PTQSEISTSL PPDRQRRKRE bmy_11577T0/1-823 DSLSEGSTSE QQDELQEESE MSEKKSCSSS PTQSEISTSL PPDRQRRKRE BACU005573/1-785 DSLSEGSTSE QQDELQEESE MSEKKSCSSS PTQSEISTSL PPDRQRRKRE 801 850 ENSTTRP00000002157/1-866 LRTFSFSDDE NKPPSPK--- ---------- ----EIRIEV SERLHLDSNP ENSP00000378235/1-866 LRTFSFSDDE NKPPSPK--- ---------- ----EIRIEV AERLHLDSNP ENSBTAP00000053475/1-868 LRTFSFSDDE NKPPSPKE-- ---------- --MKEIRIEV AERLHLDSNP bmy_11577T0/1-823 LRTFSFSDDE NKPPSPKNEI ALTPFGLLLS WGMKEIRIEV SERLHLDSNP BACU005573/1-785 LRTFSFSDDE NKPPSPK--- ---------- ---------- ---------- 851 900 ENSTTRP00000002157/1-866 LKWSVADVVR FIRSTDCAPL ARIFLDQEID GQALLLLTLP TVQECMDLKL ENSP00000378235/1-866 LKWSVADVVR FIRSTDCAPL ARIFLDQEID GQALLLLTLP TVQECMDLKL ENSBTAP00000053475/1-868 LKWSVADVVR FIRSTDCAPL ARIFLDQEID GQALLLLTLP TVQECMDLKL bmy_11577T0/1-823 LKWSVADVVR FIRSTDCAPL ARIFLDQEID GQALLLLTLP TVQECMDLKL BACU005573/1-785 ---------- ---------- -------EID GQALLLLTLP TIQECMDLKL 901 950 ENSTTRP00000002157/1-866 GPAIKLCHHI ERIKFAFYEQ FAN ENSP00000378235/1-866 GPAIKLCHHI ERIKFAFYEQ FAN ENSBTAP00000053475/1-868 GPAIKLCHHI ERIKFAFYEQ FAN bmy_11577T0/1-823 GPAIKLCHHI ERIKFAFYEQ FAN BACU005573/1-785 GPAIKLCHHI ERIKFAFYEQ FAN