KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:05:02 2014 Check: 00 .. Name: bmy_02050T0/1-950 Len: 1033 Check: 9138 Weight: 1.00 Name: ENSBTAP00000053480/1-901 Len: 1033 Check: 2432 Weight: 1.00 Name: ENSP00000326261/1-904 Len: 1033 Check: 1789 Weight: 1.00 Name: BACU007595/1-879 Len: 1033 Check: 7883 Weight: 1.00 Name: ENSTTRP00000008889/1-901 Len: 1033 Check: 4617 Weight: 1.00 // 1 50 bmy_02050T0/1-950 MDAGFFRGTS AEQDNRFSNK QKKLLKQLKF AECLEKKVDM SKVNLEVIKP ENSBTAP00000053480/1-901 MDAGFFRGTS AEQDNRFSNK QKKLLKQLKF AECLEKKVDM SKVNLEVIKP ENSP00000326261/1-904 MDAGFFRGTS AEQDNRFSNK QKKLLKQLKF AECLEKKVDM SKVNLEVIKP BACU007595/1-879 ---------- ---------- ---------- ---------M SKVNLEVIKP ENSTTRP00000008889/1-901 -------GTS AEQDNRFSNK QKKLLKQLKF AECLEKKVDM SKVNLEVIKP 51 100 bmy_02050T0/1-950 WITKRVTEIL GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE ENSBTAP00000053480/1-901 WITKRVTEIL GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE ENSP00000326261/1-904 WITKRVTEIL GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE BACU007595/1-879 WITKRVTEIL GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE ENSTTRP00000008889/1-901 WITKRVTEIL GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE 101 150 bmy_02050T0/1-950 FMGELWPLLL SAQENIAGIP SAFLELKKEE IKQRQIEQEK LASMKKQDED ENSBTAP00000053480/1-901 FMGELWPLLL SAQENIAGIP SAFLELKKEE IKQRQIEQEK LASMKKQDED ENSP00000326261/1-904 FMGELWPLLL SAQENIAGIP SAFLELKKEE IKQRQIEQEK LASMKKQDED BACU007595/1-879 FMGELWPLLL SAQENIAGIP SAFLELKKEE IKQRQIEQEK LASMKKQDED ENSTTRP00000008889/1-901 FMGELWPLLL SAQENIAGIP SAFLELKKEE IKQRQIEQEK LASMKKQDED 151 200 bmy_02050T0/1-950 KDKRDKEEKE SSREKRERSR SPRRRKSRSP SPRRRSSPVR RERKRSHSRS ENSBTAP00000053480/1-901 KDKRDKEEKE SSREKRERSR SPRRRKSRSP SPRRRSSPVR RERKRSHSRS ENSP00000326261/1-904 KDKRDKEEKE SSREKRERSR SPRRRKSRSP SPRRRSSPVR RERKRSHSRS BACU007595/1-879 KDKRDKEEKE SSREKRERSR SPRRRKSRSP SPRRRSSPVR RERKRSHSRS ENSTTRP00000008889/1-901 KDKRDKEEKE SSREKRERSR SPRRRKSRSP SPRRRSSPVR RERKRSHSRS 201 250 bmy_02050T0/1-950 PRHRTKSRSP SPAPEKKEKT PELPEPSVKF --PSLNQYQS LKNLLRRKTP ENSBTAP00000053480/1-901 PRHRTKSRSP SPAPEKKEKT PELPEPSVKV KEPSVQEATS TSDILKVPKT ENSP00000326261/1-904 PRHRTKSRSP SPAPEKKEKT PELPEPSVKV KEPSVQEATS TSDILKVPKP BACU007595/1-879 PRHRTKSRSP SPAPEKKEKT PELPEPSVKV KEPSVQEATS TSDILKVPKP ENSTTRP00000008889/1-901 PRHRTKSRSP SPAPEKKEKT PELPEPSVKV KEPSVQEATS TSDILKVPKP 251 300 bmy_02050T0/1-950 K--------- --------RK RKRRRP---- -DQDLGRVPS QDPGHVLALL ENSBTAP00000053480/1-901 EPVLEPKEPS PEKNSK--KE KEKTRPRSRS RSKSRSRTRS RSPSHTRPRK ENSP00000326261/1-904 EPIPEPKEPS PEKNSKKEKE KEKTRPRSRS RSKSRSRTRS RSPSHTRPRR BACU007595/1-879 EPVPEPKEPS PEKNSKKEKE KEKTRPRSRS RSKSRSRTRS RSPSHTRPRR ENSTTRP00000008889/1-901 EPVPEPKEPS PEKNSKKEKE KEKTRPRSRS RSKSRSRTRS RSPSHTRPRR 301 350 bmy_02050T0/1-950 LILDREDAID PDQDHT-HLE GGPAQEDGHL LEEELHRDEC LLHQGIEGVD ENSBTAP00000053480/1-901 RHRSRSRSYS PRRRPSPRRR PSPRRRTPPR RMPPPPR--- --HRRSRSPV ENSP00000326261/1-904 RHRSRSRSYS PRRRPSPRRR PSPRRRTPPR RMPPPPR--- --HRRSRSPV BACU007595/1-879 RHRSRSRSYS PRRRPSPRRR PSPRRRTPPR RMPPPPR--- --HRRSRSPV ENSTTRP00000008889/1-901 RHRSRS---- -RRRPSPRRR PSPRRRTPPR RMPPPPR--- --HRRSRSPV 351 400 bmy_02050T0/1-950 LQRRRSSASL SGSSSSSSSS RSRSPPKKPP KRTSSPPRKT RRLSPSASPP ENSBTAP00000053480/1-901 RRRRRSSASL SGSSSSSSSS RSRSPPKKPP KRTSSPPRKT RRLSPSASPP ENSP00000326261/1-904 RRRRRSSASL SGSSSSSSSS RSRSPPKKPP KRTSSPPRKT RRLSPSASPP BACU007595/1-879 RRRRRSSASL SGSSSSSSSS RSRSPPKKPP KRTSSPPRKT RRLSPSASPP ENSTTRP00000008889/1-901 RRRRRSSASL SGSSSSSSSS RSRSPPKKPP KRTSSPPRKT RRLSPSASPP 401 450 bmy_02050T0/1-950 RRRHRPSPPA TPPPKTRHSP TPQQSNRTRK SRVSVSPGRT ---------- ENSBTAP00000053480/1-901 RRRHRPSPPA TPPPKTRHSP TPQQSNRTRK SRVSVSPGRT SGKVTKHKGT ENSP00000326261/1-904 RRRHRPSPPA TPPPKTRHSP TPQQSNRTRK SRVSVSPGRT SGKVTKHKGT BACU007595/1-879 RRRHRPSPPA TPPPKTRHSP TPQQSNRTRK SRVSVSPGRT SGKVTKHKGT ENSTTRP00000008889/1-901 RRRHRPSPPA TPPPKTRHSP TPQQSNRTRK SRVSVSPGRT SGKVTKHKGT 451 500 bmy_02050T0/1-950 ---------- ---------- ---------- ---------- --------SD ENSBTAP00000053480/1-901 EKRESPSPAP KPRKVELSES EEDKGGKMAA ADSVQQRRQY RRQNQQSSSD ENSP00000326261/1-904 EKRESPSPAP KPRKVELSES EEDKGGKMAA ADSVQQRRQY RRQNQQSSSD BACU007595/1-879 EKRESPSPAP KPRKVELSES EEDKGGKMAA ADSVQQRRQY RRQNQQSSSD ENSTTRP00000008889/1-901 EKRESPSPAP KPRKVELSES EEDKGGKMAA ADSVQQRRQY RRQNQQSSSD 501 550 bmy_02050T0/1-950 SGSSSSSEDE RPKRSHVKNG EVGRRRRHSP SRSASPSPRK RQKETSPRMQ ENSBTAP00000053480/1-901 SGSSSSSEDE RPKRSHVKNG EVGRRRRHSP SRSASPSPRK RQKEASPR-- ENSP00000326261/1-904 SGSSSSSEDE RPKRSHVKNG EVGRRRRHSP SRSASPSPRK RQKETSPR-- BACU007595/1-879 SGSSSSSEDE RPKRSHVKNG EVGRRRRHSP SRSASPSPRK RQKETSPRMQ ENSTTRP00000008889/1-901 SGSSSSSEDE RPKRSHVKNG EVGRRRRHSP SRSASPSPRK RQKETSPRMQ 551 600 bmy_02050T0/1-950 MGKRWQSPVT KSGRRRRSPS PPPTRRRRSP SPAPPPRRRR SPTPPPRRRT ENSBTAP00000053480/1-901 ---------- --GRRRRSPS PPPARRRRSP SPAPPPRRRR SPTPPPRRRT ENSP00000326261/1-904 ---------- --GRRRRSPS PPPTRRRRSP SPAPPPRRRR TPTPPPRRRT BACU007595/1-879 MGKRWQSPVT KSGRRRRSPS PPPTRRRRSP SPAPPPRRRR SPTPPPRRRT ENSTTRP00000008889/1-901 MGKRWQSPVT K-SRRRRSPS PPPARRRRSP SPAPPP-RRR SPTPPPRRRT 601 650 bmy_02050T0/1-950 PSPPPRRRSP SPRRYSPPIQ RRYSPSPPPK RRTASPPPPP KRRVSPSPPP ENSBTAP00000053480/1-901 PSPPPRRRSP SPRRYSPPIQ RRYSPSPPPK RRTASPPPPP KRRASPSPPP ENSP00000326261/1-904 PSPPPRRRSP SPRRYSPPIQ RRYSPSPPPK RRTASPPPPP KRRASPSPPP BACU007595/1-879 PSPPPRRRSP SPRRYSPPIQ RRYSPSPPPK RRTASPPPPP KRRVSPSPPP ENSTTRP00000008889/1-901 PSPPPRRRSP SPRRYSPPIQ RRYSPSPPPK RRTASPPPPP KRRPSPSPPP 651 700 bmy_02050T0/1-950 KRRVSHSPPP KQRSSPVTKR RSPSLSSKHR KGSSPSRSTR EARSPQPNKR ENSBTAP00000053480/1-901 KRRVSHSPPP KQRSSPVTKR RSPSLSSKHR KGSSPSRSAR EARSPQPNKR ENSP00000326261/1-904 KRRVSHSPPP KQRSSPVTKR RSPSLSSKHR KGSSPSRSTR EARSPQPNKR BACU007595/1-879 KRRVSHSPPP KQRSSPVTKR RSPSLSSKHR KGSSPSRSTR EARSPQPNKR ENSTTRP00000008889/1-901 KRRVS-SPPP KQRSSPVKRR --SLVSSKHR KGSSPSRSTR EARSPQPNKR 701 750 bmy_02050T0/1-950 HSPSPRPRAP QTSSSPPAVR RGASSSPQRR QSPSPGSRPI RRVSRTPEPR ENSBTAP00000053480/1-901 HSPSPRPRAP QT-SSPPPAR RGASLSPQRR QSPSPSSRPI RRVSRTPEPK ENSP00000326261/1-904 HSPSPRPRAP QTSSSPPPVR RGASSSPQRR QSPSPSTRPI RRVSRTPEPK BACU007595/1-879 HSPSPRPRAP QTSSSPPAVR RGASPSPQRR QSPSPGSRPI RRVSRTPEPR ENSTTRP00000008889/1-901 HSPSPRPRAP QTSSSPPAVR RGASSSPQRR LSPSPSSRPI RRVSRTPEPK 751 800 bmy_02050T0/1-950 KIKKAASPSP QSVRRVSSSR SVSGSPEPAA KKPPAPPSPV QSQSPSTNWS ENSBTAP00000053480/1-901 KIKKAASPSP QSVRRVSSSR SVSGSPEPAA KKPPAPPSPV QSQSPSTNWS ENSP00000326261/1-904 KIKKAASPSP QSVRRVSSSR SVSGSPEPAA KKPPAPPSPV QSQSPSTNWS BACU007595/1-879 KIKKAASPSP QSVRRVSSSR SVSGSPEPAA KKPPAPPSPV QSQSPSTNWS ENSTTRP00000008889/1-901 KIKKAASPSP QSVRRVSSSR SVSGSPEPAA KKPPAPPSPV QSQSPSTNWS 801 850 bmy_02050T0/1-950 PAVPVKKAKS PTPSPSPARN SDPEGGGKKK KKKKDKKHKK DKKHKKHKKH ENSBTAP00000053480/1-901 PAVPVKKAKS PTPSPSPARN SDPEGGGKKK KKKKDKKHKK DKKHKKHKKH ENSP00000326261/1-904 PAVPVKKAKS PTPSPSPPRN SDQEGGGKKK KKKKDKKHKK DKKHKKHKKH BACU007595/1-879 PAVPVKKAKS PTPSPSPARN SDPEGGGKKK KKKKDKKHKK DKKHKKHKKH ENSTTRP00000008889/1-901 PAVPVKKAKS PTPSPSPARN SDPEGGGKKK KKKKDKKHKK DKKHKKHKKH 851 900 bmy_02050T0/1-950 KKEKAVAAAA AAPVTPAAIA APTAASAQEE PEVEPEPKKE TESEAEDNLD ENSBTAP00000053480/1-901 KKEKAVAAAA AAAVTPAAVA APTTTSAQEE PEAEPEPKKE TESEPEDNLD ENSP00000326261/1-904 KKEKAVAAAA AAAVTPAAIA AATTTLAQEE PVAAPEPKKE TESEAEDNLD BACU007595/1-879 KKEKAVAAAA AAPVTPAAIA APTAASAQEE PEAEPEPKKE TESEAEDNLD ENSTTRP00000008889/1-901 KKEKAVAAAA AAPVTPAAIA APTTASAQEE PEAEPEPKKE TESEAEDNLD 901 950 bmy_02050T0/1-950 DLEKHLREKA LRSMRKAQVS PHLSTHLSYD ASNLVWFLQA FPEIRPLLNY ENSBTAP00000053480/1-901 DLEKHLREKA LRSMRKAQVS PQS------- ---------- ---------- ENSP00000326261/1-904 DLEKHLREKA LRSMRKAQVS PQS------- ---------- ---------- BACU007595/1-879 DLEKHLREKA LRSMRKAQVS PQS------- ---------- ---------- ENSTTRP00000008889/1-901 DLEKHLREKA LRSMRKAQVS PQS------- ---------- ---------- 951 1000 bmy_02050T0/1-950 HKSINEYFNA TIFPVACGVS AEMNEDSSSR MRQKMKACFL PGHCGFILMC ENSBTAP00000053480/1-901 ---------- ---------- ---------- ---------- ---------- ENSP00000326261/1-904 ---------- ---------- ---------- ---------- ---------- BACU007595/1-879 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008889/1-901 ---------- ---------- ---------- ---------- ---------- 1001 1050 bmy_02050T0/1-950 NKLIWNTGIS LCSVYFILFF LQLTSPRKDP SVT ENSBTAP00000053480/1-901 ---------- ---------- ---------- --- ENSP00000326261/1-904 ---------- ---------- ---------- --- BACU007595/1-879 ---------- ---------- ---------- --- ENSTTRP00000008889/1-901 ---------- ---------- ---------- ---