KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:05:09 2014 Check: 00 .. Name: ENSP00000331268/1-266 Len: 291 Check: 8994 Weight: 1.00 Name: ENSBTAP00000053489/1-258 Len: 291 Check: 3884 Weight: 1.00 Name: ENSTTRP00000008095/1-283 Len: 291 Check: 1282 Weight: 1.00 Name: bmy_20097T0/1-212 Len: 291 Check: 812 Weight: 1.00 Name: BACU000685/1-258 Len: 291 Check: 3070 Weight: 1.00 // 1 50 ENSP00000331268/1-266 ---------- ------MESE GPPESESSE- --FFS-QQEE E-----NEEE ENSBTAP00000053489/1-258 ---------- ------MESE IPPESESSEK LIFSSPQEEE EEEDDSEEEE ENSTTRP00000008095/1-283 MVTAEARAWE RVFLELMESE GPPESESSEK SIFFS-QQEE EEEDDNEEEE bmy_20097T0/1-212 ---------- ------MESE GPPESESSEK SIFFS-QQEE EEEDDNEEEE BACU000685/1-258 ---------- ------MESE GPPESESSEK SIFFS-QQ-E EEEDDNEEEE 51 100 ENSP00000331268/1-266 EAQEPEETGP KNPLLQPALT GDVEGLQKIF EDPENPHHEQ AMQLLLEEDI ENSBTAP00000053489/1-258 ESKEAEETAT INPLLPPALT GDVEGLQKIF EDPENSHHEQ AMQLLLEEDI ENSTTRP00000008095/1-283 ESKEAEETAT INPLLPPALT GDVEGLQKIF EDPENPHHEQ AMQLLLEEDI bmy_20097T0/1-212 ESKEAEETAT INPLLPPALT GDVEGLQKIF EDPENPHHEQ AMQLLLEEDI BACU000685/1-258 ESKEAEETAT INPLLPPALT GDVEGLQKIF EDPENPHHDQ AMQLLLEEDI 101 150 ENSP00000331268/1-266 VGRNLLYAAC MAGQSDVIRA LAKYGVNLNE KTTRGYTLLH CAAAWGRLET ENSBTAP00000053489/1-258 VGRNLLYAAC MAGQSDVIRA LAKYGVNLNE KTTRGYTLLH CAAAWGRLET ENSTTRP00000008095/1-283 VGRNLLYAAC MAGQSDVIRA LAKYGVNLNE KTTRGYTLLH CAAAWGRLET bmy_20097T0/1-212 VGRNLLYAAC MAGQSDVIRT LAKYGVNLNE KTTRGYTLLH CAAAWGRLET BACU000685/1-258 VGRNLLYAAC MAGQSDVIRA LAKYGVNLNE KTTRGYTLLH CAAAWGRLET 151 200 ENSP00000331268/1-266 LKALVELDVD IEALNFREER ARDVAARYSQ TECVEFLDWA DARLTLKKYI ENSBTAP00000053489/1-258 LKALVELDVD IEALNFRKER ARDVAARYSQ TECVEFLDWA EARLALKKYI ENSTTRP00000008095/1-283 LKALVELDVD IESLNFQEER ARDVAARYSQ TECVEFLDRA DARLALKKYI bmy_20097T0/1-212 LKALVELDVD IESLNFQEER ARDVAARYSQ TECVEFLDWA DARLALKKYI BACU000685/1-258 LKALVELDVD IESLNFQEER ARDVAARYSQ TECVEFLDWA DARLALKKYI 201 250 ENSP00000331268/1-266 AKVSLAVTDT EKGSGKLLKE DKNTILSACR AKNEWLETHT EASINELFEQ ENSBTAP00000053489/1-258 AKVSATVTDT EKGPGKLYKE DKNILLSACR VKNEWLETHL EASINELFEQ ENSTTRP00000008095/1-283 ANVSAIVTDT AKGPGKLFKE DKNTILNACR IKNEWLETHL -ASINELFEQ bmy_20097T0/1-212 AKVSAIVTDT AKGPGKLFKE DKNIL----- ---------- ---------- BACU000685/1-258 AKVSAIVTDT AKGPGKLFKE DKNTILSACR IKNEWLETHL EASINELFEQ 251 300 ENSP00000331268/1-266 RQQLEDIVTP IFTKMTTPCQ VKSAKSVTSH DQKRSQDDTS N ENSBTAP00000053489/1-258 KQQLEDIVTP IFTKMATPRK FWIK------ ---------- - ENSTTRP00000008095/1-283 KQQLEYIVTP IFTKMATPRQ VKSAKSVLSH GQKRS----- - bmy_20097T0/1-212 ---------- ---------- -WTSL----- ---------- - BACU000685/1-258 KQQLEDIVTP IFTKMATPRK FWIKMV---- ---------- -