KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:05:09 2014 Check: 00 .. Name: bmy_05582T0/1-314 Len: 346 Check: 5192 Weight: 1.00 Name: ENSP00000321330/1-292 Len: 346 Check: 3300 Weight: 1.00 Name: ENSTTRP00000006886/1-249 Len: 346 Check: 5019 Weight: 1.00 Name: BACU016802/1-257 Len: 346 Check: 8193 Weight: 1.00 Name: ENSBTAP00000053494/1-293 Len: 346 Check: 4419 Weight: 1.00 // 1 50 bmy_05582T0/1-314 ------MFTD ISLFLFSFFQ C--------- ---------- -------LKQ ENSP00000321330/1-292 MTTTR-YRPT WDLALDPLVS CKLCLGEYPV EQMTTIAQCQ CIFCTLCLKQ ENSTTRP00000006886/1-249 MTTAR-CRPT WDLALDPLVS CKLCLGEYPV EKMTTIAQCQ CIFCTLCLKQ BACU016802/1-257 MSTAR-CRPT WDLALDPLVS CKLCLGEYPV EQMTTIAQCQ CIFCTL---- ENSBTAP00000053494/1-293 MSAARACRPS WDLALDPLVS CKLCLGEYPV EQMTTIAQCQ CVFCTLCLKQ 51 100 bmy_05582T0/1-314 YVELLIKEGL ETAISCPDAA CPKQGHLQEN EARSAGETGV HEHGLLSGSG ENSP00000321330/1-292 YVELLIKEGL ETAISCPDAA CPKQGHLQEN E--------- ---------- ENSTTRP00000006886/1-249 YVELLIKEGL ETAISCPDAA CPKQGHLQEN E--------- ---------- BACU016802/1-257 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053494/1-293 YVELLIKEGL ETAISCPDAA CPKQGHLQEN E--------- ---------- 101 150 bmy_05582T0/1-314 IECMVAAEIM QRYKKLQFER EVLLDPCRTW CPASTCQAVC QLQEMGLQTP ENSP00000321330/1-292 IECMVAAEIM QRYKKLQFER EVLFDPCRTW CPASTCQAVC QLQDVGLQTP ENSTTRP00000006886/1-249 IECMVAAEIM QKYKKLQFER EVLLDPCRTW CPASTCQAVC QLQEMGLQTP BACU016802/1-257 IECMVAAEIM QRYKKLQFER EVLLDPCRTW CPASTCQAVC QLQETGLQTP ENSBTAP00000053494/1-293 IECMVAAEIM QRYKKLQFER EVLLDPCRTW CPASTCQAVC QLQEMGLHTP 151 200 bmy_05582T0/1-314 QLVQCKACDT EFCSACKASW HPGQGCPETM PITFLPGETR YARGTDCRPG ENSP00000321330/1-292 QPVQCKACRM EFCSTCKASW HPGQGCPETM PITFLPGET- ---------- ENSTTRP00000006886/1-249 QLVQCKACDT EFCSACKASW HPGQGCPETM PITFLPGET- ---------- BACU016802/1-257 QLVQCQACDA EFCSACKASW HPGQGCPETM PITFLPGET- ---------- ENSBTAP00000053494/1-293 QLVQCKACDT EFCSACKASW HPGQGCPETM PITFLPGET- ---------- 201 250 bmy_05582T0/1-314 EGISLLPQCA SGEDRPAPRF SLSSSAFPLE EDDAPIKRCP KCKVYIERDE ENSP00000321330/1-292 ---------- ---------- ---SAAFKME EDDAPIKRCP KCKVYIERDE ENSTTRP00000006886/1-249 ---------- ---------- ---SSTFQLE EDDAPIKRCP KCKVYIERDE BACU016802/1-257 ---------- ---------- ---SSAFPLE EDDVPIKRCP KCKVYIERDE ENSBTAP00000053494/1-293 ---------- ---------- ---SSAFKLD EDDAPIKRCP KCKVYIERDE 251 300 bmy_05582T0/1-314 GCAQMMCKSC KHAFCWYCLE SLDDDFLLIH YDKGPCRNKL GHSRASVIWH ENSP00000321330/1-292 GCAQMMCKNC KHAFCWYCLE SLDDDFLLIH YDKGPCRNKL GHSRASVIWH ENSTTRP00000006886/1-249 GCAQMMCKNC KHAFCWYCLE SLDDDFLLIH YDKGPCRNKL GHSRASVIWH BACU016802/1-257 GCAQMMCKNC KHAFCWYCLE SLDDDFLLIH YDKGPCRNKL GHSRASVIWH ENSBTAP00000053494/1-293 GCAQMMCKNC KHAFCWYCLE SLDDDFLLIH YDKGPCRNKL GHSRASVIWH 301 350 bmy_05582T0/1-314 RTQVVGIFAG FGLLLLVASP FLLLATPFVL CCKCKCSKGD DDPLPT ENSP00000321330/1-292 RTQVVGIFAG FGLLLLVASP FLLLATPFVL CCKCKCSKGD DDPLPT ENSTTRP00000006886/1-249 RTQ------- ---------- ---------- ---------- ------ BACU016802/1-257 RTQVVGIFAG FGLLLLVASP FLLLATPFVL CCKCKCSKGD DDPLPT ENSBTAP00000053494/1-293 RTQVVGIFAG FGLLLLVASP FLLLATPFVL CCKCKCSKGD DDPLPT