KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:05:15 2014 Check: 00 .. Name: ENSP00000335325/1-1079 Len: 1091 Check: 1218 Weight: 1.00 Name: ENSBTAP00000053507/1-1071 Len: 1091 Check: 3687 Weight: 1.00 Name: bmy_15394T0/1-806 Len: 1091 Check: 1241 Weight: 1.00 Name: ENSTTRP00000001989/1-1004 Len: 1091 Check: 4913 Weight: 1.00 // 1 50 ENSP00000335325/1-1079 MESNFNTES- SSTFTLQSSS ETLFSIQLLD FKTSLLEALE ELRMRREAEI ENSBTAP00000053507/1-1071 MENDFKTESA SSAFSLQSSS ETLFSIQLLD FKTSLLEALE ELRMRREAET bmy_15394T0/1-806 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001989/1-1004 MENDFKTELA SSVFTLQSSS ETLFSIQLLD FKTSLLEALE ELRMRREAEA 51 100 ENSP00000335325/1-1079 HYEEQIGKII VETQELKWQK ETLQNQKETL AEQHKEAMAV FKKQLQMKMC ENSBTAP00000053507/1-1071 QYEEQIAKII METQELKWQK ETLQNQKDTL AKQHKEAMAV FKKQLQMKMC bmy_15394T0/1-806 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001989/1-1004 QYEEQIGKII METQELKWQK ETLQNQKETL TKQHKEAMAV FKKQLQMKMC 101 150 ENSP00000335325/1-1079 ALEEEKGKYQ LATEIKEKEI EGLKETLKAL QVSKYSLQKK VSEMEQKVQL ENSBTAP00000053507/1-1071 ALEEEKGKFQ LATEIKEKEI EGLKETLKTL QVSKYSLQKK VSEMEQKVQL bmy_15394T0/1-806 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001989/1-1004 ALEEEKGKYQ LATEIKEKEI EGLKETLKAL QVSKYSLQKK VSEMEQKVQL 151 200 ENSP00000335325/1-1079 HLLAKEDYHK QLSEIEKYYA TITGQFGLVK ENHEKLEQNV REAIQSNKRL ENSBTAP00000053507/1-1071 HLLAKEDHQK QLNEIEKYYT IITGQFGLVK ENHEKLEQNV QEAIQLNKRL bmy_15394T0/1-806 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001989/1-1004 HFLAKEDHQK QLNEIEKYYA TITGQFGLVK ENHEKLEQNV QEAIQLNKRL 201 250 ENSP00000335325/1-1079 SALNKKQEAE ICSLKKELKK AASDLIKSKV TC-QYKMGEE NINLTIKEQK ENSBTAP00000053507/1-1071 SALNKKQESE INSLKKELKT VTSDLIKTKV TCQQQKMGAE N-NLTIKEQK bmy_15394T0/1-806 ---------- ---------- ---------- ---------- --MLVI---- ENSTTRP00000001989/1-1004 SALNKKQESE IHSLKKELKK VTSDLIKTKV TCQQHKMGEE NINLTIKEQK 251 300 ENSP00000335325/1-1079 FQELQERLNM ELELNEKINE EITHIQEEKQ DIIISFQHMQ QLLRQQIQAN ENSBTAP00000053507/1-1071 FQELEEIIQI ELELNKKINE EITCIQDEKQ GIIISFQQLQ QLLQQQTQAN bmy_15394T0/1-806 ---------- ---------S DLENCQKQEK GIIISFQQLQ ELLQQQTQAN ENSTTRP00000001989/1-1004 FQELQERLKM ELQLNKKINE EITHIQEEKQ GIIISFQQLQ QLLQQQTQAN 301 350 ENSP00000335325/1-1079 TEMEAELKVL KENNQTLERD NELQREKVKE NEEKFLNLQN EHEKALGTWK ENSBTAP00000053507/1-1071 TEMEEKLKVI KENKQTLERD NELQREKVKE NEEKFLNLQN EHEKALGTWK bmy_15394T0/1-806 TKMEEELK-- -----TLERD NELQREKVKE NEEKFLSLQN KHDKALETWK ENSTTRP00000001989/1-1004 TKMEEELKVL KENNQTLERD NELQREKVKE NEEKFLSLQN KHEQALETWK 351 400 ENSP00000335325/1-1079 RHAEELNGEI NKIKNELSSL KETHIKLQEH YNKLCNQKTF EEDKKFQNVP ENSBTAP00000053507/1-1071 KHVEELNGEI NEIKSELSSL KETHTKLQED YDELCDQKKF EEDKKFENLP bmy_15394T0/1-806 KHVEELNGEI NEIKNELSSL KETHTKLQEH YEELCDQKKF EEDKKFQNLP ENSTTRP00000001989/1-1004 KHVEELNGEI NEIKNELSSL KETHTKLQEH YDELCDQKKF EEDKKFQNLP 401 450 ENSP00000335325/1-1079 EVNNENSEMS TEKSENTIIQ KYNTEQEIRE ENMENFCSDT EYREKEEKKE ENSBTAP00000053507/1-1071 EV---NTEMS VEKSGNTIIQ KYNSRQEIRE ENTKSCCLDT EYKEKGETKE bmy_15394T0/1-806 EV---NTEMS VEKSENTIIQ KYDSRQEVRE ENTESCCLDT EYREKEEKKE ENSTTRP00000001989/1-1004 EV---NTEMS VEKSENTIIQ KYNSRQEVRE ENTESCCLDT EYREKEEKKE 451 500 ENSP00000335325/1-1079 GSFIEEIIID --DLQLFEKS FKNEIDTVVS QDENQSEISL SKTLSLDKEV ENSBTAP00000053507/1-1071 GPFLEEIII- --DLQLFEKS SKNKIDIVVP QDENQSEISL GKTLGREKEL bmy_15394T0/1-806 APFIEEIIIG NEDLQLFEKS PKKKINTIVP ENENQSEISL SKTLGIEKEL ENSTTRP00000001989/1-1004 APFIEEITIG --DLQPFEKS PKKKINTIVP QNENQSEISL SKTLSIEKEL 501 550 ENSP00000335325/1-1079 ISQGQTSNVT DNRKSVTTEI KDKICLEKDN GCTEFKSPNN HFVVLDTAIE ENSBTAP00000053507/1-1071 ISEGQTLDIT NFTKVVTTEI KNKVDLEKDN EGTELKSPSI PFVVADSSME bmy_15394T0/1-806 ISQGQTLDVT DFTKVVTTEI QDKVDLEKDN GCTEFKSPNI SFLVADISTE ENSTTRP00000001989/1-1004 ISQGQTLDVT DFTKVVTTEI QDKVDLEKDN GCTEFKSPNI SFLVADISIE 551 600 ENSP00000335325/1-1079 TEKIHLERTR GLDVHHTDVN LEVENNKTSF NSILNETAHN TYHNNNKDVS ENSBTAP00000053507/1-1071 TEKIHLERTE GLDLHHANTH LGVENNSTSF NSILNEMACH T--NHKKDVS bmy_15394T0/1-806 REKIHLERTE GLDHHHADVH LGVKNNRTSF NSSLDETACN T--DHKKDVS ENSTTRP00000001989/1-1004 REKIHPERTE GLDHHHADVH LGVENNRTSF NSILDEMACN T--NHEKDVS 601 650 ENSP00000335325/1-1079 ENEPFK-QFR LLPGTREHAL EKEITNSDQT KADLDSSLDI KKNPVPCQKY ENSBTAP00000053507/1-1071 EDEPFKQQLR LFPGTQENTT EKVITNSHQI KTDLDSSVDI KRNLVQPQKY bmy_15394T0/1-806 EDEPFKQQFT LLPGTQENDT EKEITNSRQT KADLDSSLDV KRNPVQCQKY ENSTTRP00000001989/1-1004 EDEPFKQQFR LLPGTQENDT EKEITNSCQT KADLDSSLDV KRNLVQCQKY 651 700 ENSP00000335325/1-1079 SLRNSSNVML DDKQCKIKQI QLLTKKSECS ILLSKQTSDF LQVCNDTLEK ENSBTAP00000053507/1-1071 SLQDSNNVML DDKQCKIRQT QLLNKKSECS LLPFKETSDV QQVGEGPSEQ bmy_15394T0/1-806 SLPDSSNVML DDKQCKIRQI QLLNKKSECS ILPFKEISDF QQVGDDTSEH ENSTTRP00000001989/1-1004 NLPDSRNVML DDKQCKIRQI QLLNKKSECS VLPFKEISDF RQVGDDTSEQ 701 750 ENSP00000335325/1-1079 SELTVPCDIV IDHHVSYAAF SANSKLLLKN SDKNVHSMSM LVKPNSSPGG ENSBTAP00000053507/1-1071 PQLAIPCDTA INHPISSAVF SDNLNVLLKN SDKIVNIMPM LVTPNSSPGK bmy_15394T0/1-806 PELTIPCDIA INHPISSAIF SDNLNVLLKN SDKTVNIMPM LVTPNSSPAK ENSTTRP00000001989/1-1004 PELTIPCDIA INRPISSAVF SDNLNVLLKN SDKNVNIMPV LVTPNSSPVK 751 800 ENSP00000335325/1-1079 KTMC-KNMSD MQNSQFNNCL GYLENTNVNI SHLHLNNENS HASQAKDVKT ENSBTAP00000053507/1-1071 RTIW-KNLND MQNSQFENCL GCLEN-NVTL SHLQINNENI DASQAKDMKT bmy_15394T0/1-806 RTIYRKNVND MHNSQVKNCL GYLEN-NVTV SHLQINNENI DASQAKDMKT ENSTTRP00000001989/1-1004 RTIYRKNVND MHNSQVKNCL GYLED-NVTV SHLQTNNENV DASQAKDMKT 801 850 ENSP00000335325/1-1079 AVHMKTCTET EFSNKKNQID ENQVTEATKN DLFLFVSINE RQHTLLNNTE ENSBTAP00000053507/1-1071 ASHVKTSTEM QFSNKESQID ENQITEVKKK DYFP----NE RQHTLLNSTE bmy_15394T0/1-806 AIHVKTSTEI QFSSKGSQID ENQITEVKKN DLFP----NE RRHTLLNSTE ENSTTRP00000001989/1-1004 AIHVKTSTEI QFSSKESQID ENQRTEVKKN DLFP----NE RQHTLLNSTE 851 900 ENSP00000335325/1-1079 KTESLNDIVS GKMFSEGQLE ESHSFHIEPS GDLVNRSGRS TFDLSTSDKK ENSBTAP00000053507/1-1071 KTESLNDIVS GKIYSEGQLE ESCSFHIKPS GDLVNISGRS AFDLSTSDKK bmy_15394T0/1-806 KIESLNDIVS GKIYSEGQLE ESCSLHIKPS GDLVNRSGRS AFDLSTSDKK ENSTTRP00000001989/1-1004 KTESLNDIVS GKIYSEGQLE ESCPFHIKPS GDLVNRSGRS AFDLSTSDKK 901 950 ENSP00000335325/1-1079 TEKTPVYMNF SDPGPWSKVN HIESQTASSS TPCISLLLKE RPLDPSENKK ENSBTAP00000053507/1-1071 TEKTLVYVNF LGPSSWSKVN QIESQTVSTS TSSIPLLLNE RPVSLLENKK bmy_15394T0/1-806 TEKTLVYVNF LDPSSWPKVN QIESQTVSTS TSSIPLSLKK RPIGLLENKK ENSTTRP00000001989/1-1004 TEKTLVYVNF LDPSSWPKVN QIESQTVSTS TSSIPLLLKK RPIGLLENKK 951 1000 ENSP00000335325/1-1079 IISMALCKNI GVDDVGKDIG PDTTSINRVA DTLNNWSIHP DPKGEPSEEK ENSBTAP00000053507/1-1071 TVSMTLCKNV SVDEARNDVG PDTTSINRVA DTLNNSSIHP DPRGEPSEER bmy_15394T0/1-806 MVSLTPCKNV GVDDDRTDSG PDTTSINRVA DILNNSSIHP DPRGEPSEER ENSTTRP00000001989/1-1004 MVSLTPCKNV GVDDDGKDSG PDSTSINRVA DILNNSSIHP DPRREPSEER 1001 1050 ENSP00000335325/1-1079 NAMAKTFYDS SFPTEHVKTK PLISTPLQSH LQAIKTTKNT ------SGDD ENSBTAP00000053507/1-1071 NAIAKTFYDS SFPTEHVKTK PLKSTPLQSH FQAIKIKNTD --SDVSSGED bmy_15394T0/1-806 NAIAKTFCDS SFPTEHVKTK PLKSTLPQSH FQAIKIKTTT GLAASSTGED ENSTTRP00000001989/1-1004 NAIAKTFCDS SFPTEH---- ---------- ---------- ---------- 1051 1100 ENSP00000335325/1-1079 DWQSLITNQL NKSENLLSLE NDNQPKKRKA EETLEKNNRL K ENSBTAP00000053507/1-1071 DWQHLVTNQI NEIEKFLSLE NNNQPKKRKA EEMAEKTD-- - bmy_15394T0/1-806 DWQSLVTNQI NEIEKFLSSE NDNQPKKRKA EEMVGKTD-- - ENSTTRP00000001989/1-1004 ---------- ---------- ---------- ---------- -