KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:06:05 2014 Check: 00 .. Name: ENSBTAP00000053528/1-747 Len: 760 Check: 2131 Weight: 1.00 Name: ENSP00000371577/1-747 Len: 760 Check: 4713 Weight: 1.00 Name: bmy_17017T0/1-713 Len: 760 Check: 7768 Weight: 1.00 Name: BACU015042/1-526 Len: 760 Check: 2605 Weight: 1.00 Name: ENSTTRP00000016413/1-747 Len: 760 Check: 1460 Weight: 1.00 // 1 50 ENSBTAP00000053528/1-747 MLGKGVVGGG GGTKAPKPSF VSYVRPEEIH TNEKEATEKE VTLHLLPGEQ ENSP00000371577/1-747 MLGKGVVGGG GGTKAPKPSF VSYVRPEEIH TNEKEVTEKE VTLHLLPGEQ bmy_17017T0/1-713 -MCTKLLG-- ---------- -HFTKTREIH TNEKEVTEKE VTLHLLPGEQ BACU015042/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016413/1-747 MLGKGVVGGG GGTKAPKPSF VSYVRPEEIH TNEKEVTEKE VTLHLLPGEQ 51 100 ENSBTAP00000053528/1-747 LLCEANTVLK CVQEDSCQRG IYGRLVCTDF KIAFLGDDES ALDNDETQFK ENSP00000371577/1-747 LLCEASTVLK YVQEDSCQHG VYGRLVCTDF KIAFLGDDES ALDNDETQFK bmy_17017T0/1-713 LLCEASTVLK CVQEDSCQRG IYGRLVCTDF KIAFLGDDES ALDNDETQFK BACU015042/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016413/1-747 LLCEASTVLK CVQEDSCQRG IYGRLVCTDF KIAFLGDDES ALDNDETQFK 101 150 ENSBTAP00000053528/1-747 NKVIGENDIT LHCVDQIYGV FDEKKKTLFG QLKKYPEKLV IHCKDLRVFH ENSP00000371577/1-747 NKVIGENDIT LHCVDQIYGV FDEKKKTLFG QLKKYPEKLI IHCKDLRVFQ bmy_17017T0/1-713 NKVIGENDIT LHCVDQIYGV FDEKKKTLFG QLKKYPEKLI IHCKDLRVFH BACU015042/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016413/1-747 NKVIGENDIT LHCVDQIYGV FDEKKKTLFG QLKKYPEKLI IHCKDLRVFH 151 200 ENSBTAP00000053528/1-747 FCLRYTKEEE VKRIVSGIIH HTQAPKLLKR LFLFSYATAA RNSPATDPKK ENSP00000371577/1-747 FCLRYTKEEE VKRIVSGIIH HTQAPKLLKR LFLFSYATAA QNNTVTDPKN bmy_17017T0/1-713 FCLRYTKEEE VKRIVSGIIH HTQAPKLLKR LFLFSYATAA QNHTALKPMT BACU015042/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016413/1-747 FCLRYTKEEE VKRIVSGIIH HTQAPKLLKR LFLFSYATAA QNHTATDPKN 201 250 ENSBTAP00000053528/1-747 HAVMFDTLQD WCRELERTKG NMKYKAVSVN EGYKVCERLP AYFVVPAPLL ENSP00000371577/1-747 HTVMFDTLKD WCWELERTKG NMKYKAVSVN EGYKVCERLP AYFVVPTPLP bmy_17017T0/1-713 ---------- ---------- ---------- ---SLSSRLP AYFVVPTPLP BACU015042/1-526 ---------- ---------- -MKYKAVSVN EGYKVCERLP AYFVVPTPLP ENSTTRP00000016413/1-747 HAVMFDTLQD WCWELERTKG NMKYKAVSVN EGYKVCERLP AYFVVPTPLP 251 300 ENSBTAP00000053528/1-747 EEDIEFFQGR GIPIWCWSCH NGCALLKMSA LPKEQDDSMS QIQKNFSDRI ENSP00000371577/1-747 EENVQRFQGH GIPIWCWSCH NGSALLKMSA LPKEQDDGIL QIQKSFLDGI bmy_17017T0/1-713 EEDVPRFQGH GIPIWCWSCH SGCALLKMSA LPKEQDDGIL QIQKNFLDGI BACU015042/1-526 EEDVPRFQGH GIPIWCWSCH SGRALLKMSA LPREQDDGIS QIQKNFLDAI ENSTTRP00000016413/1-747 EEDVPRFHGH GIPIWCWSCH SGCALLKMSA LPKEQDDGVL QIQKNFLDGI 301 350 ENSBTAP00000053528/1-747 YRTVHRPPYE TAKTEDLSSN FLSLQEIQMA YSKFKQLFLI DNSTEFWDTD ENSP00000371577/1-747 YKTIHRPPYE IVKTEDLSSN FLSLQEIQTA YSKFKQLFLI DNSTEFWDTD bmy_17017T0/1-713 YKTIHRPPYE IVKTEDLSSN FLSLQEIQTA YSKFKQLFLI DNSTEFWDTD BACU015042/1-526 YKTIHRPPYE IVKTEDLSSN FLSLQEIQTA YSKFKQLFLG DNSTEFWDTD ENSTTRP00000016413/1-747 YKTIHRPPYE IVKTEDLSSN FLSLQEIQTA YSKFKQLFLI DNSTEFWDTD 351 400 ENSBTAP00000053528/1-747 IKWFSLLESS SWLDIIRRCL KKAVEIIECL EAQNMNVLLL EDNASDLCCL ENSP00000371577/1-747 IKWFSLLESS SWLDIIRRCL KKAIEITECM EAQNMNVLLL EENASDLCCL bmy_17017T0/1-713 IKWFSLLESS SWLDIIRRCL KKAIEIVECL EAQNMNVLLL EENASDLCCL BACU015042/1-526 IKWFSLLESS SWLDIIRRCL KKAIEIIECL EAQNMNVLLL EENASDLCCL ENSTTRP00000016413/1-747 IKWFSLLESS SWLDIIRRCL KKAIEIIECL EAQNMNVLLL EENASDLCCL 401 450 ENSBTAP00000053528/1-747 VSSLAQVMMD PHCRTVFGFQ SLVQKEWVMG GHCFLDRCNH LRQSDKEEVP ENSP00000371577/1-747 ISSLVQLMMD PHCRTRIGFQ SLIQKEWVMG GHCFLDRCNH LRQNDKEEVP bmy_17017T0/1-713 VSSLVQVMMD PHCRTRFGFQ SLVQKEWIVG GHCFLDRCNH LRQSDKEEVP BACU015042/1-526 VSSLVQVMMD PHCRTRFGFQ SLVQKEWIVG GHCFLDRCNH LRQSDKEEVP ENSTTRP00000016413/1-747 VSSLVQVMMD PHCRTRFGFQ SLVQKEWIVG GHCFLDRCNH LRQSDKEEVP 451 500 ENSBTAP00000053528/1-747 VFLLFLDCVW QLVHQHPPAF EFTETYLTVL SDSLYIPIFS TFFFNSPHQK ENSP00000371577/1-747 VFLLFLDCVW QLVHQHPPAF EFTETYLTVL SDSLYIPIFS TFFFNSPHQK bmy_17017T0/1-713 VFLLFLDCVW QLVHQHPPAF EFTETYLTVL SDSLYIPIFS TFFFNSPHQK BACU015042/1-526 VFLLFLDCVW QLVHQHPPAF EFTETYLTVL SDSLYIPIFS TFFFNSPHQK ENSTTRP00000016413/1-747 VFLLFLDCVW QLVHQHPPAF EFTETYLTVL SDSLYIPIFS TFFFNSPHQK 501 550 ENSBTAP00000053528/1-747 DMNV------ -------GKE SQDSQSRPLN LLTVWDWSVQ FEPKAQTLLT ENSP00000371577/1-747 DTNM------ -------GRE GQDTQSKPLN LLTVWDWSVQ FEPKAQTLLK bmy_17017T0/1-713 DTNXPCWKRR DLCLFWQGRE SQGAQSKPLN LLTVWDWSVQ FEPKAQTLLK BACU015042/1-526 DTNM------ -------GRE SQGAQSKPLN LLTVWDWSVQ FEPKAQMLLK ENSTTRP00000016413/1-747 DANM------ -------GRE GQGAQSKPLN LLTVWDWSVQ FEPKAQTLLK 551 600 ENSBTAP00000053528/1-747 NPLYVEKPKL EKVQRKGTHF KHQRQLSLPL TQSKSSPKRG FFREETDHLI ENSP00000371577/1-747 NPLYVEKPKL DKGQRKGMRF KHQRQLSLPL TQSKSSPKRG FFREETDHLI bmy_17017T0/1-713 NPLYVEKPKL DKGQRKGTHF KHQRQLSLPL TQSKSSPKRG FFREETDHLI BACU015042/1-526 NPLYVEKPKL DKGQRKGTHF KHQRQLSLPL TQSKSSPKRG FFREETDHLI ENSTTRP00000016413/1-747 NPLYVEKPKL DKGQRKGTHF KHQRQLSLPL TQSKSSPKRG FFREETDHLI 601 650 ENSBTAP00000053528/1-747 KNLLGKRISK LINSSEELQD GFREFYDGWH SRPPSYQGLL LPHLEGPEIK ENSP00000371577/1-747 KNLLGKRISK LINSSDELQD NFREFYDSWH SKSTDYHGLL LPHIEGPEIK bmy_17017T0/1-713 KNLLGKRISK LINSSEELQD NFREFYDSWR SKPPNYHGLL LPHIEGPEIK BACU015042/1-526 KNLLGKRISK LINSSEELQD NFREFYDSWR SKPPNYHGLL LPHIEGPEIK ENSTTRP00000016413/1-747 KNLLGKRISK LINSSEELQD NFREFYDSWR SKPPNYHGLL LPHIEGPEIK 651 700 ENSBTAP00000053528/1-747 VWAQRYLRWI PEAQILGGGG VATMSKLLEM MEEVQRLQEK IEARHHSQEA ENSP00000371577/1-747 VWAQRYLRWI PEAQILGGGQ VATLSKLLEM MEEVQSLQEK IDERHHSQQA bmy_17017T0/1-713 VWAQRYLRWI PEAQILGGGR VATLSKLLEM MEEVQRLQEK IEERHHSQEA BACU015042/1-526 VWAQRYLRWI PEAQILGGGR VATLSKLLEM MEEVQRLQEK IEERHHSQEA ENSTTRP00000016413/1-747 VWAQRYLRWI PEAQILGGGR VATLSKLLET MEEVQRLQEK IEERHHSQEA 701 750 ENSBTAP00000053528/1-747 LQAEAASPPR TSGRLSSLFP FALLQRHSSK PVLPTSGWKA LGDEDDLAKR ENSP00000371577/1-747 PQAEAPCLLR NSARLSSLFP FALLQRHSSK PVLPTSGWKA LGDEDDLAKR bmy_17017T0/1-713 LQAEATSLLR TSARLSSLFP FALLQRHSSK PVLPXSGWKA LGDEEDLAKR BACU015042/1-526 LQAEAASLLR TSARLSSLFP FALLQRHSSK PVLPTSGWKA LGDEEDLAKR ENSTTRP00000016413/1-747 LQAEAASLLR TSARLSSLFP FALLQRHSSK PVLPTSGWKA LGDEEDLAKR 751 800 ENSBTAP00000053528/1-747 EDEFVDLGDV ENSP00000371577/1-747 EDEFVDLGDV bmy_17017T0/1-713 EDEFVDLGDV BACU015042/1-526 EDEFVDLGDV ENSTTRP00000016413/1-747 EDEFVDLGDV