KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:06:06 2014 Check: 00 .. Name: ENSBTAP00000053529/1-919 Len: 926 Check: 7753 Weight: 1.00 Name: ENSP00000450857/1-920 Len: 926 Check: 7397 Weight: 1.00 Name: ENSTTRP00000007818/1-905 Len: 926 Check: 6727 Weight: 1.00 Name: bmy_18723T0/1-695 Len: 926 Check: 7022 Weight: 1.00 Name: BACU013136/1-723 Len: 926 Check: 4188 Weight: 1.00 // 1 50 ENSBTAP00000053529/1-919 MTTLDHVIAT HQSEWVSFNE EPLFPVPSEG GPKEHLPGAS SSSDQSESSS ENSP00000450857/1-920 MTTLDHVIAT HQSEWVSFNE EPPFPAHSQG GTEEHLPGLS SSPDQSESSS ENSTTRP00000007818/1-905 MTTLDHVIAT HQSEWVSFNE EPLFPVPSEG GTEEHLPGPS SSSDQSEISS bmy_18723T0/1-695 ---------- ---------- ---------- ---------- ---------- BACU013136/1-723 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000053529/1-919 GEHHALDGGS QDLSHSEHDD SSEKLGLISE AASPPGSPEQ RPPELVSAIS ENSP00000450857/1-920 GENHVVDGGS QDHSHSEQDD SSEKMGLISE AASPPGSPEQ PPPDLASAIS ENSTTRP00000007818/1-905 GENRVVDGGS QDLSPSEHDD SSEKMGLISE AASPPLSPEQ PPPDLASAIS bmy_18723T0/1-695 ---------- ---------- ---------- ---------- ---------- BACU013136/1-723 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000053529/1-919 SWVQFEDDAP WASSSPPPKE VGGTATSLAM PCWTCPSFDS LGRCPLPSES ENSP00000450857/1-920 NWVQFEDDTP WASTSPPHQE TAETALPLTM PCWTCPSFDS LGRCPLTSES ENSTTRP00000007818/1-905 SWVQFEDDTP WASTLPPHKE AGGTAISLTM PCWTCPSFSS LRRCPLPSES bmy_18723T0/1-695 ---------- ---------- ---------- ---------- ---------- BACU013136/1-723 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000053529/1-919 SWTTHSEDTS SPSFGPSYTD LQLVSAGEQ- SGLASGADST DNSSSLQEDE ENSP00000450857/1-920 SWTTHSEDTS SPSFGCSYTD LQLINAEEQT SGQASGADST DNSSSLQEDE ENSTTRP00000007818/1-905 SWTTHSEDTS SPSFGPSYTG LQLISAEEQ- SGLASRADST XXXXXXQEDE bmy_18723T0/1-695 ---------- ---------- ---------- ---------- ---------- BACU013136/1-723 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000053529/1-919 EVEMEAISWQ AGSPAMNGHP TTPVTSARFP SWVTFDDNEV SGPLSPITSP ENSP00000450857/1-920 EVEMEAISWQ ASSPAMNGHP APPVTSARFP SWVTFDDNEV SCPLPPVTSP ENSTTRP00000007818/1-905 EVEMEAINWQ ASSPAMNGHP ATLVTSARFP SWVTFDDNEV SSPLPPITSP bmy_18723T0/1-695 ---MEAINWQ ASSPAMNGHP ATLVTSARFP SWVTFDDNEV SSPLPPITSP BACU013136/1-723 ---MEAINWQ ASSPAMNGHP ATLVTSARFP SWVTFDDNEV SSPLPPITSP 251 300 ENSBTAP00000053529/1-919 LKPETLPLAS VTPDGPYNLT GSFKKRERPK SSLMNFSKVQ KLDVSSVSHP ENSP00000450857/1-920 LKPNTPPSAS VIPDVPYNSM GSFKKRDRPK STLMNFSKVQ KLDISSLNRT ENSTTRP00000007818/1-905 LKPKTPPLAS VIPDVPCNST GSFKKRERPK STLMNFSKVQ KLDISSLNRP bmy_18723T0/1-695 LKPKTPPLAS VIPDAPYNST GSFKKRERPK STLMNFSKVQ KLDISSLNHP BACU013136/1-723 LKPKTPPLAS VIPDAPYNST GSFKKRERPK STLMNFSKVQ KLDISSLNHP 301 350 ENSBTAP00000053529/1-919 PAVPEAPPWR ATNPFLNETL QDVQPSPINP FRAFFEEQER RAQSSSVSST ENSP00000450857/1-920 PSVTEASPWR ATNPFLNETL QDVQPSPINP FSAFFEEQER RSQNSSISST ENSTTRP00000007818/1-905 PSVPEAPLWR ATNPFLNETL QDVQPSPINP FRAFFEEQER RSQDNSMSGT bmy_18723T0/1-695 PSVPEAPLWR ATNPFLNETL QDVQPSPINP FRAFFEEQER RSQDNSMSGT BACU013136/1-723 PSVPEAPLWR ATNPFLNETL QDVQPSPINP FRAFFEERER RSQDNSMSGT 351 400 ENSBTAP00000053529/1-919 LGKSQRDSLI VVYRDAISFD DSSRNQSRSD AVEKLKRLQI EDSDHLGGVT ENSP00000450857/1-920 TGKSQRDSLI VIYQDAISFD DSSKTQSHSD AVEKLKQLQI DDPDHFGSAT ENSTTRP00000007818/1-905 TGKSQRDSLI VIYKDAISFD DSSKNQSHCD AVEKLKRLQL EDPDHLGSTT bmy_18723T0/1-695 TGKSQRDSLI VIYKDAINFD DSSKNQSHSD AVEKLKRLQI EDPDHLGSTT BACU013136/1-723 TGKSQRDSLI VIYKDAINFD DSSKNQSHSD AVEKLKRLQI EDPDHLGSTT 401 450 ENSBTAP00000053529/1-919 LPDDDPAAWA ELDAHPAGSE QSPPRDGWPM MLRIPEKKNI MSSRHWGPIY ENSP00000450857/1-920 LPDDDPVAWI ELDAHPPGSA RSQPRDGWPM MLRIPEKKNI MSSRHWGPIF ENSTTRP00000007818/1-905 LPDDDPIAWI ELDDHPPGSA LSQPKDGWPM MLRIPEKKNI MSSRHWGPIY bmy_18723T0/1-695 LPDDDPIAWI ELDDHPPGSA LSQPRDGWPM MLRIPEKKNI MSSRHWGPIY BACU013136/1-723 LPDDDPIAWI ELDDHPPGSA LAQPRDGWPM MLRIPEKKNI MSSRHWGPIY 451 500 ENSBTAP00000053529/1-919 VKLTDGGYLQ LYYEQGLERP FREFKLEMYH EISEPRLQNY DENGRIHSLR ENSP00000450857/1-920 VKLTDTGYLQ LYYEQGLEKP FREFKLEICH EISEPRLQNY DENGRIHSLR ENSTTRP00000007818/1-905 IKLTDSGYLQ LYYEKGLEKP FREFKLEICH EISEPRLQNY DENGRIHSLR bmy_18723T0/1-695 IKLTDSGYLQ LYYEKGLEKP FREFKLEICH EISEPRLQNY DENGRIHSLR BACU013136/1-723 IKLTDSGYLQ LYYEKGLEKP FREFKLEICH EISEPRLQNY DENGRIHSLR 501 550 ENSBTAP00000053529/1-919 IDRVTYKEKK KYQPKPAVAH LAEREQVIKL GTTNYEDFLS FIRAVQDRLM ENSP00000450857/1-920 IDRVTYKEKK KYQPKPAVAH TAEREQVIKL GTTNYDDFLS FIHAVQDRLM ENSTTRP00000007818/1-905 IDRVTYKEKK KYQPKPAVAH VAEREQVIKL GTTNYDDFLS FIRAVQDRLM bmy_18723T0/1-695 IDRVTYKEKK KYQPKPAVAH VAEREQVIKL GTTNYDDFLS FIRAVQDRLM BACU013136/1-723 IDRVTYKEKK KYQPKPAVAH VAEREQVIKL GTTNYDDFLS FIRAVQDRLM 551 600 ENSBTAP00000053529/1-919 ELPVLSTELS TVGLNYLEEE MTVDVQDEFS GLVSKGDNQI LQHRVLTRIH ENSP00000450857/1-920 DLPVLSMDLS TVGLNYLEEE ITVDVRDEFS GIVSKGDNQI LQHHVLTRIH ENSTTRP00000007818/1-905 DLPVLSMDLC TVGLNYLEEE IAVDVRDEFS GLVSKGDNQI LQHRVLTRVH bmy_18723T0/1-695 DLPVLSMDLC TVGLNYLEEE IVVDVRDEFS GLVSKGDNQI LQHRVLTRVH BACU013136/1-723 DLPVLSMDLC TVGLNYLEEE IVVDVRDEFS GLVSKGDNQI LQHRVLTRVH 601 650 ENSBTAP00000053529/1-919 VLSFLSGLAE CRLGLNDVLV KGNEVVSRQD IVPTTTTKWI RLHECRFHGC ENSP00000450857/1-920 ILSFLSGLAE CRLGLNDILV KGNEIVLRQD IMPTTTTKWI KLHECRFHGC ENSTTRP00000007818/1-905 ILSFLSGLAE CRLGLNDVLV KGNEIVSRQD IMPTTTTKWI KLHECHFHRC bmy_18723T0/1-695 ILSFLSGLAE CRLGLNDVLV KGNEIVSRQD IMPTTTTKWI KLHECHFHRC BACU013136/1-723 ILSFLSGLAE CRLGLNDVLV KGNEIVSRQD IMPTTTTKWI KLHECHFHRC 651 700 ENSBTAP00000053529/1-919 VDEDVFRGSR VILFNPLDAC RFELMRFRTV FAEKTLPFTL RTAASIHGAE ENSP00000450857/1-920 VDEDVFHNSR VILFNPLDAC RFELMRFRTV FAEKTLPFTL RTATSVNGAE ENSTTRP00000007818/1-905 VDEDVFNSSR VILFNPLDAC RLELMRFRTV FAEKTLPFTL RTVASISGAE bmy_18723T0/1-695 VDEDVFNSSR VILFNPLDAC RLELMRFRTV FAEKTLPFTL RTVASISGAE BACU013136/1-723 VDEDVFNSSR VILFNPLDAC RLELMRFRTV FAEKTLPFTL RTVASISGAE 701 750 ENSBTAP00000053529/1-919 VEVQSWLRMS AGFSSNWDPL TQVPCENVMV RYPVPSEWVK NFRRESVLGE ENSP00000450857/1-920 VEVQSWLRMS TGFSANRDPL TQVPCENVMI RYPVPSEWVK NFRRESVLGE ENSTTRP00000007818/1-905 VEVQSWLRMS SGFSSNCDPL TQVPCENVMV RYPVPSEWVK NFRRESVLGE bmy_18723T0/1-695 VEVQSWLRMS SGFSSNCDPL TQVPCENVMV RYPVPSEWVK NLRRESVLGE BACU013136/1-723 VEVQSWLRMS SGFSSNCDPL TQVPCENVMV RYPVPSEWVK NLRRESVLGE 751 800 ENSBTAP00000053529/1-919 KSLKAKVNRG ASFGSASISG SEPVMRVTLG TAKYEHAFNA IVWRINRLPD ENSP00000450857/1-920 KSLKAKVNRG ASFGSTSVSG SEPVMRVTLG TAKYEHAFNS IVWRINRLPD ENSTTRP00000007818/1-905 KSLKAKVNRG ASFGSTSLSG SEPVMRVTLG TAKYEHAFNS IVWRINRLPD bmy_18723T0/1-695 KSLKAKVNRG ASFGSSSLSG SEPVMRVTLG TAKYEHAFNS IVWRINRLPD BACU013136/1-723 KSLKAKVNRG ASFGSSSLSG SEPVMRVTLG TAKYEHAFNS IVWRINRLPD 801 850 ENSBTAP00000053529/1-919 KNSASGHPHC FFCHLELGSD REVPSRFANH VNVEFSMPTT SASKAAVRSI ENSP00000450857/1-920 KNSASGHPHC FFCHLELGSD REVPSRFANH VNVEFSMPTT SASKASVRSI ENSTTRP00000007818/1-905 KNSASGHPHC FFCHLELGSD REVPSRFANH INVEFSMPTT SASKAAVRSI bmy_18723T0/1-695 KNSASGHPHC FFCHLELGSD REVPSRFANH VNVEFSMPTT SASRAAVRSI BACU013136/1-723 KNAASGHPHC FFCHLELGSD REVPSRFANH VNVEFSMPTT SASRAAVRSI 851 900 ENSBTAP00000053529/1-919 SVEDKTDVRK WVNYSAHYSY KVA-GGIWLM LPSLSIYPQT LPAPIPFSSA ENSP00000450857/1-920 SVEDKTDVRK WVNYSAHYSY QTTETDNLPN PLYCSCLPHT -----DLKRG ENSTTRP00000007818/1-905 SVEDKTDVRK WVNYSAHYSY KVASGGIWLM FPSLSVHPHA LPLSFLLAVP bmy_18723T0/1-695 SVEDKTDVRK WVNYSAHYSY KVEIEQKKSL KPDFEGD--- -----EMENP BACU013136/1-723 SVEDKTDVRK WVNYSAHYSY KVASGGIWLM FPSLSVHPHA LPLLIPFSSA 901 950 ENSBTAP00000053529/1-919 RPGCRR---- -ALRPPWRWP TVHSWA ENSP00000450857/1-920 SKRVVKIRWN ASLEVPLASS IRTMV- ENSTTRP00000007818/1-905 AQGAGY---- ---------- ------ bmy_18723T0/1-695 KECGVQ---- ---------- ------ BACU013136/1-723 CPGCRVFSYH LAGGLPCIAV VESALS